RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 GAGE10A6NGK3 116 aa4.27□□□□□ -1.73
SMG6-209ENST00000571442 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
SMG6-209ENST00000571442 E9PLD3 99 aa4.27□□□□□ -1.73
SMG6-209ENST00000571442 EIF4EBP3O60516 100 aaPredicted RBP4.27□□□□□ -1.73
SMG6-209ENST00000571442 VPREB1P12018 145 aa4.27□□□□□ -1.73
SMG6-209ENST00000571442 C1orf137Q5JT78 98 aa4.27□□□□□ -1.73
SMG6-209ENST00000571442 ATOH7Q8N100 152 aa4.27□□□□□ -1.73
SMG6-209ENST00000571442 DAND5Q8N907 189 aa4.27□□□□□ -1.73
SMG6-209ENST00000571442 LINC00167Q96N53 147 aa4.27□□□□□ -1.73
SMG6-209ENST00000571442 PLA2G2DQ9UNK4 145 aa4.27□□□□□ -1.73
SMG6-209ENST00000571442 IGLV5-37A0A075B6J1 123 aa4.26□□□□□ -1.73
SMG6-209ENST00000571442 RPL37AP8A6NKH3 93 aa4.26□□□□□ -1.73
SMG6-209ENST00000571442 MT1HL1P0DM35 61 aa4.26□□□□□ -1.73
SMG6-209ENST00000571442 LINC00158P58513 81 aa4.26□□□□□ -1.73
SMG6-209ENST00000571442 SNRPEP62304 92 aaKnown RBP4.26□□□□□ -1.73
SMG6-209ENST00000571442 COX17Q14061 63 aa4.26□□□□□ -1.73
SMG6-209ENST00000571442 ANKRD39Q53RE8 183 aa4.26□□□□□ -1.73
SMG6-209ENST00000571442 MEIG1Q5JSS6 88 aa4.26□□□□□ -1.73
SMG6-209ENST00000571442 MRPL55Q7Z7F7 128 aaKnown RBP4.26□□□□□ -1.73
SMG6-209ENST00000571442 MIR7-3HGQ8N6C7 128 aa4.26□□□□□ -1.73
SMG6-209ENST00000571442 PLEKHB2Q96CS7 222 aa4.26□□□□□ -1.73
SMG6-209ENST00000571442 A0A0J9YXY3 114 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 MYMXA0A1B0GTQ4 84 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 C5orf52A6NGY3 159 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 IGLV7-43P04211 117 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 LGALS3P17931 250 aaKnown RBP4.25□□□□□ -1.73
SMG6-209ENST00000571442 HERVK_113P61574 105 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 UBE2BP63146 152 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 ADAMTSL4-AS1Q5T5F5 129 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 SFTA2Q6UW10 78 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 SOSTDC1Q6X4U4 206 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 TP73-AS1Q9UF72 201 aa4.25□□□□□ -1.73
SMG6-209ENST00000571442 HERV-K104P63124 156 aa4.24□□□□□ -1.73
SMG6-209ENST00000571442 LITAFQ99732 161 aa4.24□□□□□ -1.73
SMG6-209ENST00000571442 HMCN2Q8NDA2 5059 aa4.23□□□□□ -1.73
SMG6-209ENST00000571442 IGKV2-28A0A075B6P5 120 aa4.23□□□□□ -1.73
SMG6-209ENST00000571442 TMEM238C9JI98 176 aa4.23□□□□□ -1.73
SMG6-209ENST00000571442 IGKV2D-28P01615 120 aa4.23□□□□□ -1.73
SMG6-209ENST00000571442 S100A2P29034 98 aa4.23□□□□□ -1.73
SMG6-209ENST00000571442 NMUP48645 174 aa4.23□□□□□ -1.73
SMG6-209ENST00000571442 NPC2P61916 151 aa4.23□□□□□ -1.73
SMG6-209ENST00000571442 SPINK6Q6UWN8 80 aa4.23□□□□□ -1.73
SMG6-209ENST00000571442 IGLV1-50A0A075B6I6 118 aa4.22□□□□□ -1.73
SMG6-209ENST00000571442 LOC107984156A0A0G2JMH3 177 aa4.22□□□□□ -1.73
SMG6-209ENST00000571442 NCR3O14931 201 aa4.22□□□□□ -1.73
SMG6-209ENST00000571442 OXTP01178 125 aa4.22□□□□□ -1.73
SMG6-209ENST00000571442 S100A6P06703 90 aa4.22□□□□□ -1.73
SMG6-209ENST00000571442 LBHQ53QV2 105 aaPredicted RBP4.22□□□□□ -1.73
SMG6-209ENST00000571442 PCP2Q8IVA1 136 aa4.22□□□□□ -1.73
SMG6-209ENST00000571442 ARL17AQ8IVW1 177 aa4.22□□□□□ -1.73
SMG6-209ENST00000571442 BOD1L2Q8IYS8 172 aa4.22□□□□□ -1.73
SMG6-209ENST00000571442 NKAPP1Q8N9T2 125 aa4.22□□□□□ -1.73
SMG6-209ENST00000571442 C20orf202A1L168 122 aa4.21□□□□□ -1.74
SMG6-209ENST00000571442 ZNF815PA8K554 130 aa4.21□□□□□ -1.74
SMG6-209ENST00000571442 M0R378 163 aa4.21□□□□□ -1.74
SMG6-209ENST00000571442 BCE1O60756 84 aa4.21□□□□□ -1.74
SMG6-209ENST00000571442 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
SMG6-209ENST00000571442 KRTAP13-1Q8IUC0 172 aa4.21□□□□□ -1.74
SMG6-209ENST00000571442 H0Y9J4 135 aa4.2□□□□□ -1.74
SMG6-209ENST00000571442 ZNF861PO60384 105 aa4.2□□□□□ -1.74
SMG6-209ENST00000571442 PRLHP81277 87 aa4.2□□□□□ -1.74
SMG6-209ENST00000571442 RPL24P83731 157 aaKnown RBP4.2□□□□□ -1.74
SMG6-209ENST00000571442 LINC01600Q96MT4 127 aa4.2□□□□□ -1.74
SMG6-209ENST00000571442 TMEM126AQ9H061 195 aa4.2□□□□□ -1.74
SMG6-209ENST00000571442 UBR4Q5T4S7 5183 aa4.2□□□□□ -1.74
SMG6-209ENST00000571442 TRBV10-3A0A0K0K1G6 114 aa4.19□□□□□ -1.74
SMG6-209ENST00000571442 LINC00587B1AMM8 73 aa4.19□□□□□ -1.74
SMG6-209ENST00000571442 KRTAP10-8P60410 259 aa4.19□□□□□ -1.74
SMG6-209ENST00000571442 KRTAP4-16G5E9R7 235 aaPredicted RBP4.18□□□□□ -1.74
SMG6-209ENST00000571442 TIMM17BO60830 172 aa4.18□□□□□ -1.74
SMG6-209ENST00000571442 REG3GQ6UW15 175 aa4.18□□□□□ -1.74
SMG6-209ENST00000571442 PRR26Q8N8Z3 221 aa4.18□□□□□ -1.74
SMG6-209ENST00000571442 LINC00308Q8TCZ7 52 aa4.18□□□□□ -1.74
SMG6-209ENST00000571442 DIRC1Q969H9 104 aa4.18□□□□□ -1.74
SMG6-209ENST00000571442 TMA7Q9Y2S6 64 aaKnown RBP4.18□□□□□ -1.74
SMG6-209ENST00000571442 SCGB1D1O95968 90 aa4.17□□□□□ -1.74
SMG6-209ENST00000571442 SPRR1AP35321 89 aa4.17□□□□□ -1.74
SMG6-209ENST00000571442 FAM19A1Q7Z5A9 133 aa4.17□□□□□ -1.74
SMG6-209ENST00000571442 KCNQ1DNQ9H478 68 aa4.17□□□□□ -1.74
SMG6-209ENST00000571442 ANAPC11Q9NYG5 84 aa4.17□□□□□ -1.74
SMG6-209ENST00000571442 TRBV10-2A0A0K0K1G8 114 aa4.16□□□□□ -1.74
SMG6-209ENST00000571442 NDUFC2O95298 119 aa4.16□□□□□ -1.74
SMG6-209ENST00000571442 RPL28P46779 137 aaKnown RBP4.16□□□□□ -1.74
SMG6-209ENST00000571442 UBE2AP49459 152 aa4.16□□□□□ -1.74
SMG6-209ENST00000571442 SPANXDQ9BXN6 97 aa4.16□□□□□ -1.74
SMG6-209ENST00000571442 SPANXB1Q9NS25 103 aaPredicted RBP4.16□□□□□ -1.74
SMG6-209ENST00000571442 SPANXCQ9NY87 97 aa4.16□□□□□ -1.74
SMG6-209ENST00000571442 A0A087X002 238 aa4.15□□□□□ -1.75
SMG6-209ENST00000571442 PRYO14603 147 aa4.15□□□□□ -1.75
SMG6-209ENST00000571442 IGLV6-57P01721 117 aa4.15□□□□□ -1.75
SMG6-209ENST00000571442 DDTP30046 118 aa4.15□□□□□ -1.75
SMG6-209ENST00000571442 JOSD1Q15040 202 aaPredicted RBP4.15□□□□□ -1.75
SMG6-209ENST00000571442 SCGB1D4Q6XE38 83 aa4.15□□□□□ -1.75
SMG6-209ENST00000571442 MUSTN1Q8IVN3 82 aa4.15□□□□□ -1.75
SMG6-209ENST00000571442 LINC00337Q8N6G1 96 aa4.15□□□□□ -1.75
SMG6-209ENST00000571442 MIEN1Q9BRT3 115 aa4.15□□□□□ -1.75
SMG6-209ENST00000571442 B5MCH6 92 aa4.14□□□□□ -1.75
SMG6-209ENST00000571442 ERC2-IT1O76042 136 aa4.14□□□□□ -1.75
SMG6-209ENST00000571442 KRTAP13-2Q52LG2 175 aa4.14□□□□□ -1.75
SMG6-209ENST00000571442 PYY3Q5JQD4 70 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms