RNA–Protein interactions for RNA: ENST00000569440.5

BBS4-218, Transcript of Bardet-Biedl syndrome 4, human

TSL 4

Gene BBS4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-218	ENST00000569440	NOL3	O60936	208 aa	Known RBP	3.05	□□□□□ -1.92
BBS4-218	ENST00000569440	GNG4	P50150	75 aa		3.05	□□□□□ -1.92
BBS4-218	ENST00000569440	RAB5B	P61020	215 aa		3.05	□□□□□ -1.92
BBS4-218	ENST00000569440	FAM19A3	Q7Z5A8	133 aa		3.05	□□□□□ -1.92
BBS4-218	ENST00000569440	AKAP14	Q86UN6	197 aa		3.05	□□□□□ -1.92
BBS4-218	ENST00000569440	AMN1	Q8IY45	258 aa		3.05	□□□□□ -1.92
BBS4-218	ENST00000569440	TIMM17A	Q99595	171 aa		3.05	□□□□□ -1.92
BBS4-218	ENST00000569440	MED9	Q9NWA0	146 aa		3.05	□□□□□ -1.92
BBS4-218	ENST00000569440	BORCS7-ASMT	A0A0B4J1R7	106 aa		3.04	□□□□□ -1.92
BBS4-218	ENST00000569440	SPRR1A	P35321	89 aa		3.04	□□□□□ -1.92
BBS4-218	ENST00000569440	KCNRG	Q8N5I3	272 aa		3.04	□□□□□ -1.92
BBS4-218	ENST00000569440	SFT2D1	Q8WV19	159 aa		3.04	□□□□□ -1.92
BBS4-218	ENST00000569440	C20orf78	Q9BR46	151 aa		3.04	□□□□□ -1.92
BBS4-218	ENST00000569440	EIF5A2	Q9GZV4	153 aa	Known RBP	3.04	□□□□□ -1.92
BBS4-218	ENST00000569440	TRBV24-1	A0A075B6N3	115 aa		3.03	□□□□□ -1.92
BBS4-218	ENST00000569440	ERC2-IT1	O76042	136 aa		3.03	□□□□□ -1.92
BBS4-218	ENST00000569440	IFI27	P40305	119 aa	Predicted RBP	3.03	□□□□□ -1.92
BBS4-218	ENST00000569440	ZC2HC1B	Q5TFG8	222 aa		3.03	□□□□□ -1.92
BBS4-218	ENST00000569440	TEX43	Q6ZNM6	134 aa		3.03	□□□□□ -1.92
BBS4-218	ENST00000569440	ATP11AUN	Q6ZP68	121 aa		3.03	□□□□□ -1.92
BBS4-218	ENST00000569440	TMEM141	Q96I45	108 aa		3.03	□□□□□ -1.92
BBS4-218	ENST00000569440	SND1-IT1	Q9HBX3	110 aa		3.03	□□□□□ -1.92
BBS4-218	ENST00000569440	CDKN2A-AS1	Q9UH64	79 aa		3.03	□□□□□ -1.92
BBS4-218	ENST00000569440		A0A1B0GV50	99 aa		3.02	□□□□□ -1.93
BBS4-218	ENST00000569440		K7EN84	100 aa		3.02	□□□□□ -1.93
BBS4-218	ENST00000569440	SSNA1	O43805	119 aa		3.02	□□□□□ -1.93
BBS4-218	ENST00000569440	ATP6V1G1	O75348	118 aa		3.02	□□□□□ -1.93
BBS4-218	ENST00000569440	ADAMTSL4-AS1	Q5T5F5	129 aa		3.02	□□□□□ -1.93
BBS4-218	ENST00000569440	C9orf153	Q5TBE3	101 aa		3.02	□□□□□ -1.93
BBS4-218	ENST00000569440	C1orf195	Q5TG92	126 aa		3.02	□□□□□ -1.93
BBS4-218	ENST00000569440	C2orf66	Q6UXQ4	117 aa		3.02	□□□□□ -1.93
BBS4-218	ENST00000569440	AMELX	Q99217	191 aa		3.02	□□□□□ -1.93
BBS4-218	ENST00000569440	TRBV20-1	A0A075B6N2	111 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440		A0A1B0GUT8	65 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440		A6NN06	94 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440		A8MWL6	223 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440	RAB14	P61106	215 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440	HRCT1	Q6UXD1	115 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440	COX7B2	Q8TF08	81 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440	PRAC1	Q96KF2	57 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440	LITAF	Q99732	161 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440	C2orf88	Q9BSF0	95 aa		3.01	□□□□□ -1.93
BBS4-218	ENST00000569440	SPRR2E	P22531	72 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440	SPRR2B	P35325	72 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440	SPRR2A	P35326	72 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440	HERVK_113	P63121	156 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440	C6orf99	Q4VX62	202 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440		Q5BKY6	102 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440	PDZD11	Q5EBL8	140 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440		Q5XG85	94 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440		Q6ZVQ6	151 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440	SMIM2	Q9BVW6	85 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440	KCNQ1DN	Q9H478	68 aa		3	□□□□□ -1.93
BBS4-218	ENST00000569440	LINC00862	A6NCI5	91 aa		2.99	□□□□□ -1.93
BBS4-218	ENST00000569440	PFN2	P35080	140 aa		2.99	□□□□□ -1.93
BBS4-218	ENST00000569440	MRPL51	Q4U2R6	128 aa	Known RBP	2.99	□□□□□ -1.93
BBS4-218	ENST00000569440	C10orf91	Q5T1B1	145 aa		2.99	□□□□□ -1.93
BBS4-218	ENST00000569440	FAM213B	Q8TBF2	198 aa		2.99	□□□□□ -1.93
BBS4-218	ENST00000569440	BORCS7	Q96B45	105 aa		2.99	□□□□□ -1.93
BBS4-218	ENST00000569440	VCX2	Q9H322	139 aa		2.99	□□□□□ -1.93
BBS4-218	ENST00000569440	MANBAL	Q9NQG1	85 aa		2.99	□□□□□ -1.93
BBS4-218	ENST00000569440	ETDC	A0A1B0GVM5	59 aa		2.98	□□□□□ -1.93
BBS4-218	ENST00000569440	GATC	O43716	136 aa	Known RBP	2.98	□□□□□ -1.93
BBS4-218	ENST00000569440	PDE6D	O43924	150 aa		2.98	□□□□□ -1.93
BBS4-218	ENST00000569440	GIP	P09681	153 aa	Predicted RBP	2.98	□□□□□ -1.93
BBS4-218	ENST00000569440	SEC11A	P67812	179 aa		2.98	□□□□□ -1.93
BBS4-218	ENST00000569440	FAM104B	Q5XKR9	115 aa		2.98	□□□□□ -1.93
BBS4-218	ENST00000569440	ENKUR	Q8TC29	256 aa		2.98	□□□□□ -1.93
BBS4-218	ENST00000569440		Q9BRP9	147 aa		2.98	□□□□□ -1.93
BBS4-218	ENST00000569440	GNG13	Q9P2W3	67 aa		2.98	□□□□□ -1.93
BBS4-218	ENST00000569440	TRAV9-1	A0A075B6T8	112 aa		2.97	□□□□□ -1.93
BBS4-218	ENST00000569440	NDUFAF8	A1L188	74 aa		2.97	□□□□□ -1.93
BBS4-218	ENST00000569440	HIGD1C	A8MV81	97 aa		2.97	□□□□□ -1.93
BBS4-218	ENST00000569440	UMAD1	C9J7I0	102 aa		2.97	□□□□□ -1.93
BBS4-218	ENST00000569440	ATP5L	O75964	103 aa		2.97	□□□□□ -1.93
BBS4-218	ENST00000569440	CD164	Q04900	197 aa		2.97	□□□□□ -1.93
BBS4-218	ENST00000569440	IGIP	A6NJ69	53 aa		2.96	□□□□□ -1.94
BBS4-218	ENST00000569440	CKS2	P33552	79 aa		2.96	□□□□□ -1.94
BBS4-218	ENST00000569440	COX17	Q14061	63 aa		2.96	□□□□□ -1.94
BBS4-218	ENST00000569440	NOTCH2NL	Q7Z3S9	236 aa		2.96	□□□□□ -1.94
BBS4-218	ENST00000569440		A0A0G2JQZ4	141 aa		2.95	□□□□□ -1.94
BBS4-218	ENST00000569440	FAM236D	A0A1B0GTK5	79 aa		2.95	□□□□□ -1.94
BBS4-218	ENST00000569440	FAM236C	P0DP71	79 aa		2.95	□□□□□ -1.94
BBS4-218	ENST00000569440	RAB5A	P20339	215 aa		2.95	□□□□□ -1.94
BBS4-218	ENST00000569440	TAGLN2	P37802	199 aa	Known RBP	2.95	□□□□□ -1.94
BBS4-218	ENST00000569440	RIG	Q13278	110 aa		2.95	□□□□□ -1.94
BBS4-218	ENST00000569440		Q1RN00	199 aa		2.95	□□□□□ -1.94
BBS4-218	ENST00000569440	ERG28	Q9UKR5	140 aa		2.95	□□□□□ -1.94
BBS4-218	ENST00000569440	FXYD6-FXYD2	A0A087WZ82	144 aa		2.94	□□□□□ -1.94
BBS4-218	ENST00000569440		H7C2G1	150 aa		2.94	□□□□□ -1.94
BBS4-218	ENST00000569440	NPY	P01303	97 aa		2.94	□□□□□ -1.94
BBS4-218	ENST00000569440	ALKAL2	Q6UX46	152 aa		2.94	□□□□□ -1.94
BBS4-218	ENST00000569440		D6R8Y8	96 aa		2.93	□□□□□ -1.94
BBS4-218	ENST00000569440	SPINK8	P0C7L1	97 aa		2.93	□□□□□ -1.94
BBS4-218	ENST00000569440	SPRR1B	P22528	89 aa		2.93	□□□□□ -1.94
BBS4-218	ENST00000569440	HERV-K104	P63124	156 aa		2.93	□□□□□ -1.94
BBS4-218	ENST00000569440		Q6ZRX8	168 aa		2.93	□□□□□ -1.94
BBS4-218	ENST00000569440		Q6ZVH6	145 aa		2.93	□□□□□ -1.94
BBS4-218	ENST00000569440	ST20-AS1	Q8NBB2	130 aa		2.93	□□□□□ -1.94
BBS4-218	ENST00000569440	SPRR2F	Q96RM1	72 aa		2.93	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms