RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 PRB4P10163 310 aaPredicted RBP4.31□□□□□ -1.72
KARS-211ENST00000569298 C11orf71Q6IPW1 123 aa4.31□□□□□ -1.72
KARS-211ENST00000569298 PI4KAP42356 2102 aa4.31□□□□□ -1.72
KARS-211ENST00000569298 TNCP24821 2201 aa4.3□□□□□ -1.72
KARS-211ENST00000569298 ARFGEF3Q5TH69 2177 aa4.3□□□□□ -1.72
KARS-211ENST00000569298 IGHV3-23P01764 117 aa4.3□□□□□ -1.72
KARS-211ENST00000569298 APELAP0DMC3 54 aa4.3□□□□□ -1.72
KARS-211ENST00000569298 HIGD2BQ4VC39 106 aa4.3□□□□□ -1.72
KARS-211ENST00000569298 LINC01006Q8NI28 216 aa4.3□□□□□ -1.72
KARS-211ENST00000569298 DIDO1Q9BTC0 2240 aaKnown RBP4.3□□□□□ -1.72
KARS-211ENST00000569298 ASH1LQ9NR48 2969 aaKnown RBP4.29□□□□□ -1.72
KARS-211ENST00000569298 IGLV7-46A0A075B6I9 117 aa4.29□□□□□ -1.72
KARS-211ENST00000569298 IGHV3-72A0A0B4J1Y9 119 aa4.29□□□□□ -1.72
KARS-211ENST00000569298 PINLYPA6NC86 204 aa4.29□□□□□ -1.72
KARS-211ENST00000569298 MINOS1Q5TGZ0 78 aa4.29□□□□□ -1.72
KARS-211ENST00000569298 SMIM29Q86T20 159 aa4.29□□□□□ -1.72
KARS-211ENST00000569298 LINC00612Q8N6U2 182 aa4.29□□□□□ -1.72
KARS-211ENST00000569298 TENM4Q6N022 2769 aa4.29□□□□□ -1.72
KARS-211ENST00000569298 PIEZO2Q9H5I5 2752 aa4.28□□□□□ -1.72
KARS-211ENST00000569298 ATP6V0E1O15342 81 aa4.28□□□□□ -1.72
KARS-211ENST00000569298 SPAG11BQ08648 103 aa4.28□□□□□ -1.72
KARS-211ENST00000569298 KRTAP15-1Q3LI76 137 aa4.28□□□□□ -1.72
KARS-211ENST00000569298 KPRPQ5T749 579 aaPredicted RBP4.28□□□□□ -1.72
KARS-211ENST00000569298 MAP6D1Q9H9H5 199 aa4.28□□□□□ -1.72
KARS-211ENST00000569298 DPM3Q9P2X0 92 aa4.28□□□□□ -1.72
KARS-211ENST00000569298 ASXL3Q9C0F0 2248 aa4.27□□□□□ -1.73
KARS-211ENST00000569298 PRRC2CQ9Y520 2896 aaKnown RBP4.27□□□□□ -1.73
KARS-211ENST00000569298 IGHV3OR16-8A0A075B7F1 116 aa4.27□□□□□ -1.73
KARS-211ENST00000569298 IGHV4-61A0A0C4DH41 118 aa4.27□□□□□ -1.73
KARS-211ENST00000569298 ODF3BA8MYP8 253 aa4.27□□□□□ -1.73
KARS-211ENST00000569298 C9orf163Q8N9P6 203 aa4.27□□□□□ -1.73
KARS-211ENST00000569298 DEFB108BQ8NET1 73 aa4.27□□□□□ -1.73
KARS-211ENST00000569298 URB1O60287 2271 aaKnown RBP4.26□□□□□ -1.73
KARS-211ENST00000569298 ZNF462Q96JM2 2506 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 IGHV4-28A0A0C4DH34 117 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 ODF3L2Q3SX64 289 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 C10orf25Q5T742 122 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 COA5Q86WW8 74 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 ZGRF1Q86YA3 2104 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 Q8IZM0 81 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 Q8NAQ8 132 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 CHCHD10Q8WYQ3 142 aaPredicted RBP4.26□□□□□ -1.73
KARS-211ENST00000569298 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 TTTY12Q9BZ98 90 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 MYO18BQ8IUG5 2567 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 MED13Q9UHV7 2174 aa4.26□□□□□ -1.73
KARS-211ENST00000569298 A0A1W2PNM2 257 aa4.25□□□□□ -1.73
KARS-211ENST00000569298 ROMO1P60602 79 aa4.25□□□□□ -1.73
KARS-211ENST00000569298 DEFB133Q30KQ1 61 aa4.25□□□□□ -1.73
KARS-211ENST00000569298 Q6ZQY7 126 aa4.25□□□□□ -1.73
KARS-211ENST00000569298 DEFB104AQ8WTQ1 72 aa4.25□□□□□ -1.73
KARS-211ENST00000569298 MAST4O15021 2626 aa4.25□□□□□ -1.73
KARS-211ENST00000569298 RP1P56715 2156 aa4.24□□□□□ -1.73
KARS-211ENST00000569298 COL27A1Q8IZC6 1860 aaPredicted RBP4.24□□□□□ -1.73
KARS-211ENST00000569298 B4DSR2 109 aa4.24□□□□□ -1.73
KARS-211ENST00000569298 H0Y9P7 68 aa4.24□□□□□ -1.73
KARS-211ENST00000569298 IGLV6-57P01721 117 aa4.24□□□□□ -1.73
KARS-211ENST00000569298 DSCR9P59020 149 aa4.24□□□□□ -1.73
KARS-211ENST00000569298 SPATA8Q6RVD6 105 aa4.24□□□□□ -1.73
KARS-211ENST00000569298 FLNCQ14315 2725 aa4.24□□□□□ -1.73
KARS-211ENST00000569298 SPTA1P02549 2419 aa4.24□□□□□ -1.73
KARS-211ENST00000569298 IGLV5-48A0A075B6I7 105 aa4.23□□□□□ -1.73
KARS-211ENST00000569298 LY6G6EA0A0G2JKS1 128 aa4.23□□□□□ -1.73
KARS-211ENST00000569298 H3BUA1 57 aa4.23□□□□□ -1.73
KARS-211ENST00000569298 IGHV3-11P01762 117 aa4.23□□□□□ -1.73
KARS-211ENST00000569298 ATP1A1-AS1Q5TC04 95 aa4.23□□□□□ -1.73
KARS-211ENST00000569298 SPAG11AQ6PDA7 123 aa4.23□□□□□ -1.73
KARS-211ENST00000569298 MINOS1-NBL1R4GNA1 71 aa4.23□□□□□ -1.73
KARS-211ENST00000569298 PTPRQQ9UMZ3 2332 aa4.23□□□□□ -1.73
KARS-211ENST00000569298 SDK2Q58EX2 2172 aa4.22□□□□□ -1.73
KARS-211ENST00000569298 IGHV3OR16-13A0A075B7E8 117 aa4.22□□□□□ -1.73
KARS-211ENST00000569298 TRGV4A0A0C4DH28 118 aa4.22□□□□□ -1.73
KARS-211ENST00000569298 A8MTW9 85 aa4.22□□□□□ -1.73
KARS-211ENST00000569298 SPINK7P58062 85 aa4.22□□□□□ -1.73
KARS-211ENST00000569298 C1orf134Q5TEV5 83 aa4.22□□□□□ -1.73
KARS-211ENST00000569298 ST20-AS1Q8NBB2 130 aa4.22□□□□□ -1.73
KARS-211ENST00000569298 BSNQ9UPA5 3926 aa4.22□□□□□ -1.73
KARS-211ENST00000569298 TLN1Q9Y490 2541 aaKnown RBP4.22□□□□□ -1.73
KARS-211ENST00000569298 HECTD1Q9ULT8 2610 aa4.22□□□□□ -1.73
KARS-211ENST00000569298 Q8N9L7 120 aa4.21□□□□□ -1.74
KARS-211ENST00000569298 USMG5Q96IX5 58 aa4.21□□□□□ -1.74
KARS-211ENST00000569298 ARHGAP32A7KAX9 2087 aa4.21□□□□□ -1.74
KARS-211ENST00000569298 UBR5O95071 2799 aaPredicted RBP4.2□□□□□ -1.74
KARS-211ENST00000569298 PROK1P58294 105 aa4.2□□□□□ -1.74
KARS-211ENST00000569298 SPINK14Q6IE38 97 aa4.2□□□□□ -1.74
KARS-211ENST00000569298 Q8N9W7 124 aa4.2□□□□□ -1.74
KARS-211ENST00000569298 SPRR4Q96PI1 79 aa4.2□□□□□ -1.74
KARS-211ENST00000569298 RELNP78509 3460 aa4.2□□□□□ -1.74
KARS-211ENST00000569298 MALRD1Q5VYJ5 2156 aa4.2□□□□□ -1.74
KARS-211ENST00000569298 LRRK2Q5S007 2527 aa4.19□□□□□ -1.74
KARS-211ENST00000569298 IGKV2D-24A0A075B6R9 120 aa4.19□□□□□ -1.74
KARS-211ENST00000569298 DEFB131BA0A096LNP1 70 aa4.19□□□□□ -1.74
KARS-211ENST00000569298 PRR4Q16378 134 aa4.19□□□□□ -1.74
KARS-211ENST00000569298 DEFB112Q30KQ8 113 aa4.19□□□□□ -1.74
KARS-211ENST00000569298 TOMM7Q9P0U1 55 aa4.19□□□□□ -1.74
KARS-211ENST00000569298 U3KQA8 63 aa4.19□□□□□ -1.74
KARS-211ENST00000569298 CENPEQ02224 2701 aa4.19□□□□□ -1.74
KARS-211ENST00000569298 AHCTF1Q8WYP5 2266 aa4.19□□□□□ -1.74
KARS-211ENST00000569298 UTP20O75691 2785 aaKnown RBP4.19□□□□□ -1.74
KARS-211ENST00000569298 NAV2Q8IVL1 2488 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms