RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 SMIM13P0DJ93 91 aa5.75□□□□□ -1.49
CHD9-219ENST00000569225 LBHQ53QV2 105 aaPredicted RBP5.75□□□□□ -1.49
CHD9-219ENST00000569225 C12orf57Q99622 126 aa5.75□□□□□ -1.49
CHD9-219ENST00000569225 SND1-IT1Q9HBX3 110 aa5.75□□□□□ -1.49
CHD9-219ENST00000569225 A0A0U1RRA0 63 aa5.74□□□□□ -1.49
CHD9-219ENST00000569225 ZNF815PA8K554 130 aa5.74□□□□□ -1.49
CHD9-219ENST00000569225 PLA2G1BP04054 148 aaKnown RBP5.74□□□□□ -1.49
CHD9-219ENST00000569225 IGKV2D-26A0A0A0MRZ7 120 aa5.73□□□□□ -1.49
CHD9-219ENST00000569225 FAM168BA1KXE4 195 aa5.73□□□□□ -1.49
CHD9-219ENST00000569225 RPL24P83731 157 aaKnown RBP5.73□□□□□ -1.49
CHD9-219ENST00000569225 PLA2G2DQ9UNK4 145 aa5.73□□□□□ -1.49
CHD9-219ENST00000569225 HERC2O95714 4834 aa5.73□□□□□ -1.49
CHD9-219ENST00000569225 A0A0J9YXY3 114 aa5.73□□□□□ -1.49
CHD9-219ENST00000569225 M0QXV9 152 aa5.73□□□□□ -1.49
CHD9-219ENST00000569225 Q5VSD8 79 aa5.73□□□□□ -1.49
CHD9-219ENST00000569225 MIR7-3HGQ8N6C7 128 aa5.73□□□□□ -1.49
CHD9-219ENST00000569225 RPL37AP61513 92 aaKnown RBP5.72□□□□□ -1.49
CHD9-219ENST00000569225 JOSD1Q15040 202 aaPredicted RBP5.72□□□□□ -1.49
CHD9-219ENST00000569225 NKAPP1Q8N9T2 125 aa5.72□□□□□ -1.49
CHD9-219ENST00000569225 HSPG2P98160 4391 aa5.72□□□□□ -1.49
CHD9-219ENST00000569225 TIMM17BO60830 172 aa5.71□□□□□ -1.5
CHD9-219ENST00000569225 SERTAD4-AS1Q5TG53 156 aa5.71□□□□□ -1.5
CHD9-219ENST00000569225 SCGB1D4Q6XE38 83 aa5.71□□□□□ -1.5
CHD9-219ENST00000569225 MIEN1Q9BRT3 115 aa5.71□□□□□ -1.5
CHD9-219ENST00000569225 TP73-AS1Q9UF72 201 aa5.71□□□□□ -1.5
CHD9-219ENST00000569225 IGLV5-37A0A075B6J1 123 aa5.71□□□□□ -1.5
CHD9-219ENST00000569225 UBE2BP63146 152 aa5.71□□□□□ -1.5
CHD9-219ENST00000569225 PHF5AQ7RTV0 110 aaKnown RBP5.71□□□□□ -1.5
CHD9-219ENST00000569225 C22orf24Q9Y442 160 aa5.71□□□□□ -1.5
CHD9-219ENST00000569225 TMEM238C9JI98 176 aa5.7□□□□□ -1.5
CHD9-219ENST00000569225 MRPL55Q7Z7F7 128 aaKnown RBP5.7□□□□□ -1.5
CHD9-219ENST00000569225 BOD1L2Q8IYS8 172 aa5.7□□□□□ -1.5
CHD9-219ENST00000569225 TTTY13Q9BZ97 58 aa5.7□□□□□ -1.5
CHD9-219ENST00000569225 KRTAP7-1Q8IUC3 87 aa5.69□□□□□ -1.5
CHD9-219ENST00000569225 PCP2Q8IVA1 136 aa5.69□□□□□ -1.5
CHD9-219ENST00000569225 DAND5Q8N907 189 aa5.69□□□□□ -1.5
CHD9-219ENST00000569225 VAMP8Q9BV40 100 aa5.69□□□□□ -1.5
CHD9-219ENST00000569225 VPREB1P12018 145 aa5.68□□□□□ -1.5
CHD9-219ENST00000569225 COPS9Q8WXC6 57 aa5.68□□□□□ -1.5
CHD9-219ENST00000569225 LOC107984156A0A0G2JMH3 177 aa5.68□□□□□ -1.5
CHD9-219ENST00000569225 PRR3P79522 188 aaKnown RBP5.68□□□□□ -1.5
CHD9-219ENST00000569225 ADAMTSL4-AS1Q5T5F5 129 aa5.68□□□□□ -1.5
CHD9-219ENST00000569225 ARL17AQ8IVW1 177 aa5.68□□□□□ -1.5
CHD9-219ENST00000569225 LITAFQ99732 161 aa5.67□□□□□ -1.5
CHD9-219ENST00000569225 GAGE10A6NGK3 116 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 M0R378 163 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 SPATA45Q537H7 98 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 Q6ZVH6 145 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 LINC00167Q96N53 147 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 KRTAP17-1Q9BYP8 105 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 PSORS1C2Q9UIG4 136 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 PAM16Q9Y3D7 125 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 SRRM2Q9UQ35 2752 aaKnown RBP5.66□□□□□ -1.5
CHD9-219ENST00000569225 COX8AP10176 69 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 PYY3Q5JQD4 70 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 LINC00308Q8TCZ7 52 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 SPANXDQ9BXN6 97 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 SPANXCQ9NY87 97 aa5.66□□□□□ -1.5
CHD9-219ENST00000569225 FAT1Q14517 4588 aa5.65□□□□□ -1.5
CHD9-219ENST00000569225 DLEU1O43261 78 aa5.65□□□□□ -1.5
CHD9-219ENST00000569225 NDUFC2O95298 119 aa5.65□□□□□ -1.5
CHD9-219ENST00000569225 SMIM6P0DI80 62 aa5.65□□□□□ -1.5
CHD9-219ENST00000569225 IFITM1P13164 125 aa5.65□□□□□ -1.5
CHD9-219ENST00000569225 NPC2P61916 151 aa5.65□□□□□ -1.5
CHD9-219ENST00000569225 C1orf137Q5JT78 98 aa5.65□□□□□ -1.5
CHD9-219ENST00000569225 SPANXB1Q9NS25 103 aaPredicted RBP5.65□□□□□ -1.5
CHD9-219ENST00000569225 TRBV10-2A0A0K0K1G8 114 aa5.64□□□□□ -1.51
CHD9-219ENST00000569225 A0A1B0GV90 55 aa5.64□□□□□ -1.51
CHD9-219ENST00000569225 RPL37AP8A6NKH3 93 aa5.64□□□□□ -1.51
CHD9-219ENST00000569225 INAFM2P0DMQ5 153 aa5.64□□□□□ -1.51
CHD9-219ENST00000569225 KRTAP10-4P60372 401 aaPredicted RBP5.64□□□□□ -1.51
CHD9-219ENST00000569225 Q8NDZ9 215 aa5.64□□□□□ -1.51
CHD9-219ENST00000569225 NCR3O14931 201 aa5.64□□□□□ -1.51
CHD9-219ENST00000569225 SRSF9Q13242 221 aaKnown RBP eCLIP5.64□□□□□ -1.51
CHD9-219ENST00000569225 KRTAP4-5Q9BYR2 181 aa5.64□□□□□ -1.51
CHD9-219ENST00000569225 PPDPFQ9H3Y8 114 aa5.64□□□□□ -1.51
CHD9-219ENST00000569225 IGLV1-50A0A075B6I6 118 aa5.63□□□□□ -1.51
CHD9-219ENST00000569225 IGKV2-28A0A075B6P5 120 aa5.63□□□□□ -1.51
CHD9-219ENST00000569225 IGKV2D-28P01615 120 aa5.63□□□□□ -1.51
CHD9-219ENST00000569225 SLC25A34Q6PIV7 304 aa5.63□□□□□ -1.51
CHD9-219ENST00000569225 SOSTDC1Q6X4U4 206 aa5.63□□□□□ -1.51
CHD9-219ENST00000569225 KRTAP11-1Q8IUC1 163 aa5.62□□□□□ -1.51
CHD9-219ENST00000569225 C14orf144Q96I85 54 aa5.62□□□□□ -1.51
CHD9-219ENST00000569225 BCE1O60756 84 aa5.62□□□□□ -1.51
CHD9-219ENST00000569225 IGLV7-43P04211 117 aa5.62□□□□□ -1.51
CHD9-219ENST00000569225 S100A7L2Q5SY68 101 aa5.62□□□□□ -1.51
CHD9-219ENST00000569225 EIF4EBP3O60516 100 aaPredicted RBP5.61□□□□□ -1.51
CHD9-219ENST00000569225 DDTP30046 118 aa5.61□□□□□ -1.51
CHD9-219ENST00000569225 REG3GQ6UW15 175 aa5.61□□□□□ -1.51
CHD9-219ENST00000569225 SPINK6Q6UWN8 80 aa5.61□□□□□ -1.51
CHD9-219ENST00000569225 VPS13BQ7Z7G8 4022 aa5.61□□□□□ -1.51
CHD9-219ENST00000569225 TRBV10-3A0A0K0K1G6 114 aa5.6□□□□□ -1.51
CHD9-219ENST00000569225 PRYO14603 147 aa5.6□□□□□ -1.51
CHD9-219ENST00000569225 MUSTN1Q8IVN3 82 aa5.6□□□□□ -1.51
CHD9-219ENST00000569225 HIST1H4GQ99525 98 aa5.6□□□□□ -1.51
CHD9-219ENST00000569225 RPL28P46779 137 aaKnown RBP5.6□□□□□ -1.51
CHD9-219ENST00000569225 TMEM126AQ9H061 195 aa5.6□□□□□ -1.51
CHD9-219ENST00000569225 KCNQ1DNQ9H478 68 aa5.6□□□□□ -1.51
CHD9-219ENST00000569225 HIGD1BQ9P298 99 aa5.6□□□□□ -1.51
CHD9-219ENST00000569225 ABCA13Q86UQ4 5058 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms