RNA–Protein interactions for RNA: ENST00000568814.1

HERPUD1-216, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 509 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-216ENST00000568814 LOC107984156A0A0G2JMH3 177 aa6.48□□□□□ -1.37
HERPUD1-216ENST00000568814 CDK2AP2O75956 126 aa6.48□□□□□ -1.37
HERPUD1-216ENST00000568814 SCXQ7RTU7 201 aa6.48□□□□□ -1.37
HERPUD1-216ENST00000568814 ARL17AQ8IVW1 177 aa6.48□□□□□ -1.37
HERPUD1-216ENST00000568814 SPANXDQ9BXN6 97 aa6.48□□□□□ -1.37
HERPUD1-216ENST00000568814 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
HERPUD1-216ENST00000568814 PLAC8Q9NZF1 115 aa6.48□□□□□ -1.37
HERPUD1-216ENST00000568814 PLA2G2DQ9UNK4 145 aa6.48□□□□□ -1.37
HERPUD1-216ENST00000568814 DYNC1H1Q14204 4646 aaKnown RBP6.48□□□□□ -1.37
HERPUD1-216ENST00000568814 PKHD1P08F94 4074 aa6.47□□□□□ -1.37
HERPUD1-216ENST00000568814 IFITM1P13164 125 aa6.47□□□□□ -1.37
HERPUD1-216ENST00000568814 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
HERPUD1-216ENST00000568814 ADAMTSL4-AS1Q5T5F5 129 aa6.47□□□□□ -1.37
HERPUD1-216ENST00000568814 DAND5Q8N907 189 aa6.47□□□□□ -1.37
HERPUD1-216ENST00000568814 PPDPFQ9H3Y8 114 aa6.47□□□□□ -1.37
HERPUD1-216ENST00000568814 SPANXB1Q9NS25 103 aaPredicted RBP6.47□□□□□ -1.37
HERPUD1-216ENST00000568814 EPM2AB3EWF7 344 aa6.46□□□□□ -1.38
HERPUD1-216ENST00000568814 FAM19A5Q7Z5A7 132 aaPredicted RBP6.46□□□□□ -1.38
HERPUD1-216ENST00000568814 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.38
HERPUD1-216ENST00000568814 HIGD1BQ9P298 99 aa6.46□□□□□ -1.38
HERPUD1-216ENST00000568814 UQCR10Q9UDW1 63 aa6.46□□□□□ -1.38
HERPUD1-216ENST00000568814 IGLV5-37A0A075B6J1 123 aa6.45□□□□□ -1.38
HERPUD1-216ENST00000568814 A0A1W2PNN7 141 aa6.45□□□□□ -1.38
HERPUD1-216ENST00000568814 SRSF9Q13242 221 aaKnown RBP eCLIP6.45□□□□□ -1.38
HERPUD1-216ENST00000568814 NKAPP1Q8N9T2 125 aa6.45□□□□□ -1.38
HERPUD1-216ENST00000568814 LINC00308Q8TCZ7 52 aa6.45□□□□□ -1.38
HERPUD1-216ENST00000568814 C12orf57Q99622 126 aa6.45□□□□□ -1.38
HERPUD1-216ENST00000568814 TP73-AS1Q9UF72 201 aa6.45□□□□□ -1.38
HERPUD1-216ENST00000568814 FAM168BA1KXE4 195 aa6.44□□□□□ -1.38
HERPUD1-216ENST00000568814 M0QXV9 152 aa6.44□□□□□ -1.38
HERPUD1-216ENST00000568814 NDUFC2O95298 119 aa6.44□□□□□ -1.38
HERPUD1-216ENST00000568814 VPREB1P12018 145 aa6.44□□□□□ -1.38
HERPUD1-216ENST00000568814 XGP55808 180 aa6.44□□□□□ -1.38
HERPUD1-216ENST00000568814 LBHQ53QV2 105 aaPredicted RBP6.44□□□□□ -1.38
HERPUD1-216ENST00000568814 SERTAD4-AS1Q5TG53 156 aa6.44□□□□□ -1.38
HERPUD1-216ENST00000568814 DNAH5Q8TE73 4624 aa6.43□□□□□ -1.38
HERPUD1-216ENST00000568814 NPC2P61916 151 aa6.43□□□□□ -1.38
HERPUD1-216ENST00000568814 SOSTDC1Q6X4U4 206 aa6.43□□□□□ -1.38
HERPUD1-216ENST00000568814 C7orf33Q8WU49 177 aa6.43□□□□□ -1.38
HERPUD1-216ENST00000568814 HIST1H4GQ99525 98 aa6.43□□□□□ -1.38
HERPUD1-216ENST00000568814 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
HERPUD1-216ENST00000568814 KRTAP3-2Q9BYR7 98 aa6.43□□□□□ -1.38
HERPUD1-216ENST00000568814 TRBV10-2A0A0K0K1G8 114 aa6.42□□□□□ -1.38
HERPUD1-216ENST00000568814 TSTD3H0UI37 97 aa6.42□□□□□ -1.38
HERPUD1-216ENST00000568814 HAMPP81172 84 aa6.42□□□□□ -1.38
HERPUD1-216ENST00000568814 TAL2Q16559 108 aa6.42□□□□□ -1.38
HERPUD1-216ENST00000568814 C2orf91Q6ZV80 131 aa6.42□□□□□ -1.38
HERPUD1-216ENST00000568814 MRPL55Q7Z7F7 128 aaKnown RBP6.42□□□□□ -1.38
HERPUD1-216ENST00000568814 KRTAP7-1Q8IUC3 87 aa6.42□□□□□ -1.38
HERPUD1-216ENST00000568814 LINC00518Q8N0U6 118 aa6.42□□□□□ -1.38
HERPUD1-216ENST00000568814 C22orf24Q9Y442 160 aa6.42□□□□□ -1.38
HERPUD1-216ENST00000568814 M0R378 163 aa6.41□□□□□ -1.38
HERPUD1-216ENST00000568814 MUSTN1Q8IVN3 82 aa6.41□□□□□ -1.38
HERPUD1-216ENST00000568814 HSPG2P98160 4391 aa6.41□□□□□ -1.38
HERPUD1-216ENST00000568814 EIF4EBP3O60516 100 aaPredicted RBP6.4□□□□□ -1.38
HERPUD1-216ENST00000568814 HNRNPA3P51991 378 aaKnown RBP6.4□□□□□ -1.38
HERPUD1-216ENST00000568814 UBE2BP63146 152 aa6.4□□□□□ -1.38
HERPUD1-216ENST00000568814 PHF5AQ7RTV0 110 aaKnown RBP6.4□□□□□ -1.38
HERPUD1-216ENST00000568814 Q8NDZ9 215 aa6.4□□□□□ -1.38
HERPUD1-216ENST00000568814 PRO1933Q9H354 126 aa6.4□□□□□ -1.38
HERPUD1-216ENST00000568814 LRP1BQ9NZR2 4599 aa6.39□□□□□ -1.39
HERPUD1-216ENST00000568814 NCR3O14931 201 aa6.39□□□□□ -1.39
HERPUD1-216ENST00000568814 HSD52Q0P140 79 aa6.39□□□□□ -1.39
HERPUD1-216ENST00000568814 LINC00528Q8N1L1 170 aa6.38□□□□□ -1.39
HERPUD1-216ENST00000568814 LINC00167Q96N53 147 aa6.38□□□□□ -1.39
HERPUD1-216ENST00000568814 CBY1Q9Y3M2 126 aa6.38□□□□□ -1.39
HERPUD1-216ENST00000568814 TMEM238LA0A1B0GVL6 79 aa6.37□□□□□ -1.39
HERPUD1-216ENST00000568814 GAGE10A6NGK3 116 aa6.37□□□□□ -1.39
HERPUD1-216ENST00000568814 A6NJY4 79 aa6.37□□□□□ -1.39
HERPUD1-216ENST00000568814 S100A7L2Q5SY68 101 aa6.37□□□□□ -1.39
HERPUD1-216ENST00000568814 CEND1Q8N111 149 aa6.37□□□□□ -1.39
HERPUD1-216ENST00000568814 DNAH8Q96JB1 4490 aa6.36□□□□□ -1.39
HERPUD1-216ENST00000568814 IGLV1-50A0A075B6I6 118 aa6.36□□□□□ -1.39
HERPUD1-216ENST00000568814 TRAV13-2A0A0B4J235 113 aa6.36□□□□□ -1.39
HERPUD1-216ENST00000568814 A4D1N5 150 aa6.36□□□□□ -1.39
HERPUD1-216ENST00000568814 FAM229AH3BQW9 127 aa6.36□□□□□ -1.39
HERPUD1-216ENST00000568814 SMR3BP02814 79 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-216ENST00000568814 DDTP30046 118 aa6.36□□□□□ -1.39
HERPUD1-216ENST00000568814 PRR3P79522 188 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-216ENST00000568814 IGKV2-28A0A075B6P5 120 aa6.35□□□□□ -1.39
HERPUD1-216ENST00000568814 TRBV10-3A0A0K0K1G6 114 aa6.35□□□□□ -1.39
HERPUD1-216ENST00000568814 RPL37AP8A6NKH3 93 aa6.35□□□□□ -1.39
HERPUD1-216ENST00000568814 IGKV2D-28P01615 120 aa6.35□□□□□ -1.39
HERPUD1-216ENST00000568814 IGLV6-57P01721 117 aa6.35□□□□□ -1.39
HERPUD1-216ENST00000568814 PLA2G1BP04054 148 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-216ENST00000568814 RPL37AP61513 92 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-216ENST00000568814 TMEM126AQ9H061 195 aa6.35□□□□□ -1.39
HERPUD1-216ENST00000568814 PRYO14603 147 aa6.34□□□□□ -1.39
HERPUD1-216ENST00000568814 Q8N1X5 172 aa6.34□□□□□ -1.39
HERPUD1-216ENST00000568814 LINC00337Q8N6G1 96 aa6.34□□□□□ -1.39
HERPUD1-216ENST00000568814 OR13C6PQ8NH95 151 aa6.34□□□□□ -1.39
HERPUD1-216ENST00000568814 PSORS1C2Q9UIG4 136 aa6.34□□□□□ -1.39
HERPUD1-216ENST00000568814 A6NDN8 102 aa6.33□□□□□ -1.4
HERPUD1-216ENST00000568814 M0R143 59 aa6.33□□□□□ -1.4
HERPUD1-216ENST00000568814 REG3GQ6UW15 175 aa6.33□□□□□ -1.4
HERPUD1-216ENST00000568814 KCNQ1DNQ9H478 68 aa6.33□□□□□ -1.4
HERPUD1-216ENST00000568814 A0A0B4J2C4 111 aa6.32□□□□□ -1.4
HERPUD1-216ENST00000568814 FXYD2P54710 66 aa6.32□□□□□ -1.4
HERPUD1-216ENST00000568814 C1orf137Q5JT78 98 aa6.32□□□□□ -1.4
HERPUD1-216ENST00000568814 Q5VSD8 79 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms