RNA–Protein interactions for RNA: ENST00000568549.5

SCAPER-221, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 5

Gene SCAPER, Length 625 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-221ENST00000568549 SPACA4Q8TDM5 124 aa4.9□□□□□ -1.63
SCAPER-221ENST00000568549 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.9□□□□□ -1.63
SCAPER-221ENST00000568549 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.63
SCAPER-221ENST00000568549 TIMM17BO60830 172 aa4.89□□□□□ -1.63
SCAPER-221ENST00000568549 BOD1L2Q8IYS8 172 aa4.89□□□□□ -1.63
SCAPER-221ENST00000568549 MIR7-3HGQ8N6C7 128 aa4.89□□□□□ -1.63
SCAPER-221ENST00000568549 DAND5Q8N907 189 aa4.89□□□□□ -1.63
SCAPER-221ENST00000568549 DPH3Q96FX2 82 aa4.89□□□□□ -1.63
SCAPER-221ENST00000568549 C14orf144Q96I85 54 aa4.89□□□□□ -1.63
SCAPER-221ENST00000568549 SND1-IT1Q9HBX3 110 aa4.89□□□□□ -1.63
SCAPER-221ENST00000568549 XAGE1AQ9HD64 81 aa4.89□□□□□ -1.63
SCAPER-221ENST00000568549 FAM30AQ9NZY2 134 aa4.89□□□□□ -1.63
SCAPER-221ENST00000568549 TMEM238C9JI98 176 aa4.88□□□□□ -1.63
SCAPER-221ENST00000568549 DLEU1O43261 78 aa4.88□□□□□ -1.63
SCAPER-221ENST00000568549 C9orf129Q5T035 196 aaKnown RBP4.88□□□□□ -1.63
SCAPER-221ENST00000568549 SLC25A34Q6PIV7 304 aa4.88□□□□□ -1.63
SCAPER-221ENST00000568549 LITAFQ99732 161 aa4.88□□□□□ -1.63
SCAPER-221ENST00000568549 TP73-AS1Q9UF72 201 aa4.88□□□□□ -1.63
SCAPER-221ENST00000568549 RYR1P21817 5038 aa4.88□□□□□ -1.63
SCAPER-221ENST00000568549 A0A087WYN8 130 aa4.87□□□□□ -1.63
SCAPER-221ENST00000568549 HAMPP81172 84 aa4.87□□□□□ -1.63
SCAPER-221ENST00000568549 ADAMTSL4-AS1Q5T5F5 129 aa4.87□□□□□ -1.63
SCAPER-221ENST00000568549 C12orf57Q99622 126 aa4.87□□□□□ -1.63
SCAPER-221ENST00000568549 MIEN1Q9BRT3 115 aa4.87□□□□□ -1.63
SCAPER-221ENST00000568549 SPANXDQ9BXN6 97 aa4.87□□□□□ -1.63
SCAPER-221ENST00000568549 SPANXCQ9NY87 97 aa4.87□□□□□ -1.63
SCAPER-221ENST00000568549 A0A1W2PNN7 141 aa4.86□□□□□ -1.63
SCAPER-221ENST00000568549 FAM168BA1KXE4 195 aa4.86□□□□□ -1.63
SCAPER-221ENST00000568549 NPC2P61916 151 aa4.86□□□□□ -1.63
SCAPER-221ENST00000568549 SCXQ7RTU7 201 aa4.86□□□□□ -1.63
SCAPER-221ENST00000568549 FAM19A5Q7Z5A7 132 aaPredicted RBP4.86□□□□□ -1.63
SCAPER-221ENST00000568549 CIRBP-AS1Q8TBR5 109 aa4.86□□□□□ -1.63
SCAPER-221ENST00000568549 PLAC8Q9NZF1 115 aa4.86□□□□□ -1.63
SCAPER-221ENST00000568549 LOC107984156A0A0G2JMH3 177 aa4.85□□□□□ -1.63
SCAPER-221ENST00000568549 XGP55808 180 aa4.85□□□□□ -1.63
SCAPER-221ENST00000568549 RPL24P83731 157 aaKnown RBP4.85□□□□□ -1.63
SCAPER-221ENST00000568549 SRSF9Q13242 221 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCAPER-221ENST00000568549 SERTAD4-AS1Q5TG53 156 aa4.85□□□□□ -1.63
SCAPER-221ENST00000568549 Q6ZVH6 145 aa4.85□□□□□ -1.63
SCAPER-221ENST00000568549 ARL17AQ8IVW1 177 aa4.85□□□□□ -1.63
SCAPER-221ENST00000568549 LINC00308Q8TCZ7 52 aa4.85□□□□□ -1.63
SCAPER-221ENST00000568549 SPANXB1Q9NS25 103 aaPredicted RBP4.85□□□□□ -1.63
SCAPER-221ENST00000568549 UQCR10Q9UDW1 63 aa4.85□□□□□ -1.63
SCAPER-221ENST00000568549 PLA2G2DQ9UNK4 145 aa4.85□□□□□ -1.63
SCAPER-221ENST00000568549 M0QXV9 152 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 CDK2AP2O75956 126 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 VPREB1P12018 145 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 IFITM1P13164 125 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 SOSTDC1Q6X4U4 206 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 C2orf91Q6ZV80 131 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 KRTAP7-1Q8IUC3 87 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 LINC00518Q8N0U6 118 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 NKAPP1Q8N9T2 125 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 COPS9Q8WXC6 57 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 PRO1933Q9H354 126 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 HIGD1BQ9P298 99 aa4.84□□□□□ -1.63
SCAPER-221ENST00000568549 IGLV5-37A0A075B6J1 123 aa4.83□□□□□ -1.64
SCAPER-221ENST00000568549 EPM2AB3EWF7 344 aa4.83□□□□□ -1.64
SCAPER-221ENST00000568549 EIF4EBP3O60516 100 aaPredicted RBP4.83□□□□□ -1.64
SCAPER-221ENST00000568549 PHF5AQ7RTV0 110 aaKnown RBP4.83□□□□□ -1.64
SCAPER-221ENST00000568549 MUSTN1Q8IVN3 82 aa4.83□□□□□ -1.64
SCAPER-221ENST00000568549 Q8NDZ9 215 aa4.83□□□□□ -1.64
SCAPER-221ENST00000568549 HIST1H4GQ99525 98 aa4.83□□□□□ -1.64
SCAPER-221ENST00000568549 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
SCAPER-221ENST00000568549 C22orf24Q9Y442 160 aa4.83□□□□□ -1.64
SCAPER-221ENST00000568549 KIAA1109Q2LD37 5005 aa4.83□□□□□ -1.64
SCAPER-221ENST00000568549 HSPG2P98160 4391 aa4.82□□□□□ -1.64
SCAPER-221ENST00000568549 TSTD3H0UI37 97 aa4.82□□□□□ -1.64
SCAPER-221ENST00000568549 NCR3O14931 201 aa4.82□□□□□ -1.64
SCAPER-221ENST00000568549 NDUFC2O95298 119 aa4.82□□□□□ -1.64
SCAPER-221ENST00000568549 HNRNPA3P51991 378 aaKnown RBP4.82□□□□□ -1.64
SCAPER-221ENST00000568549 MRPL55Q7Z7F7 128 aaKnown RBP4.82□□□□□ -1.64
SCAPER-221ENST00000568549 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
SCAPER-221ENST00000568549 PPDPFQ9H3Y8 114 aa4.82□□□□□ -1.64
SCAPER-221ENST00000568549 M0R378 163 aa4.81□□□□□ -1.64
SCAPER-221ENST00000568549 UBE2BP63146 152 aa4.81□□□□□ -1.64
SCAPER-221ENST00000568549 PRR3P79522 188 aaKnown RBP4.81□□□□□ -1.64
SCAPER-221ENST00000568549 TAL2Q16559 108 aa4.81□□□□□ -1.64
SCAPER-221ENST00000568549 LBHQ53QV2 105 aaPredicted RBP4.81□□□□□ -1.64
SCAPER-221ENST00000568549 C7orf33Q8WU49 177 aa4.81□□□□□ -1.64
SCAPER-221ENST00000568549 TRBV10-2A0A0K0K1G8 114 aa4.8□□□□□ -1.64
SCAPER-221ENST00000568549 GAGE10A6NGK3 116 aa4.8□□□□□ -1.64
SCAPER-221ENST00000568549 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
SCAPER-221ENST00000568549 HSD52Q0P140 79 aa4.8□□□□□ -1.64
SCAPER-221ENST00000568549 LINC00167Q96N53 147 aa4.8□□□□□ -1.64
SCAPER-221ENST00000568549 VPS13BQ7Z7G8 4022 aa4.79□□□□□ -1.64
SCAPER-221ENST00000568549 A4D1N5 150 aa4.79□□□□□ -1.64
SCAPER-221ENST00000568549 RPL37AP8A6NKH3 93 aa4.79□□□□□ -1.64
SCAPER-221ENST00000568549 CEND1Q8N111 149 aa4.79□□□□□ -1.64
SCAPER-221ENST00000568549 LINC00528Q8N1L1 170 aa4.79□□□□□ -1.64
SCAPER-221ENST00000568549 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
SCAPER-221ENST00000568549 IGKV2-28A0A075B6P5 120 aa4.78□□□□□ -1.64
SCAPER-221ENST00000568549 IGKV2D-28P01615 120 aa4.78□□□□□ -1.64
SCAPER-221ENST00000568549 DDTP30046 118 aa4.78□□□□□ -1.64
SCAPER-221ENST00000568549 S100A7L2Q5SY68 101 aa4.78□□□□□ -1.64
SCAPER-221ENST00000568549 TRBV10-3A0A0K0K1G6 114 aa4.77□□□□□ -1.65
SCAPER-221ENST00000568549 TMEM238LA0A1B0GVL6 79 aa4.77□□□□□ -1.65
SCAPER-221ENST00000568549 A6NJY4 79 aa4.77□□□□□ -1.65
SCAPER-221ENST00000568549 FAM229AH3BQW9 127 aa4.77□□□□□ -1.65
SCAPER-221ENST00000568549 RPL37AP61513 92 aaKnown RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms