RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 DEFB1P60022 68 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 GNG11P61952 73 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 DEFB110Q30KQ9 67 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 MEIG1Q5JSS6 88 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 PPP3R2Q96LZ3 170 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 SNRNP25Q9BV90 132 aaKnown RBP-0.49□□□□□ -2.49
CDH1-211ENST00000567320 LINC00470Q9BZP3 86 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 CCDC167Q9P0B6 97 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 HIGD1BQ9P298 99 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 UQCR10Q9UDW1 63 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 CDKN2A-AS1Q9UH64 79 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 TCHHQ07283 1943 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 MYOM2P54296 1465 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 MAGI2Q86UL8 1455 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 DMXL1Q9Y485 3027 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 A0A0C4DFX4 3053 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 SPG11Q96JI7 2443 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 ZNF831Q5JPB2 1677 aa-0.49□□□□□ -2.49
CDH1-211ENST00000567320 ZFHX3Q15911 3703 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 RANBP2P49792 3224 aaKnown RBP-0.5□□□□□ -2.49
CDH1-211ENST00000567320 KNL1Q8NG31 2342 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 A0A0G2JND7 137 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 TRBV7-7A0A0K0K1E9 115 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 SPTY2D1-AS1A0A0U1RR47 76 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 UBE2L5PA0A1B0GUS4 154 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 LOC105371267A0A1B0GV96 52 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 C9orf92A6NGG3 77 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 CRYM-AS1A6NIL9 109 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 CCL22O00626 93 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 UBE2L3P68036 154 aaKnown RBP-0.5□□□□□ -2.49
CDH1-211ENST00000567320 MT1XP80297 61 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 WHAMMP3Q1A5X7 153 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 Q56UQ5 140 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 C9orf153Q5TBE3 101 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.5□□□□□ -2.49
CDH1-211ENST00000567320 LZICQ8WZA0 190 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 ARL11Q969Q4 196 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 DPH3P1Q9H4G8 78 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 LINC00846Q9NV44 126 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 SPANXCQ9NY87 97 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 PRO1854Q9UHT4 67 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 ABCC5O15440 1437 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 CLIP1P30622 1438 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 PRRC2CQ9Y520 2896 aaKnown RBP-0.5□□□□□ -2.49
CDH1-211ENST00000567320 LRRC7Q96NW7 1537 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 NRKQ7Z2Y5 1582 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 NESP48681 1621 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 POLR1AO95602 1720 aaPredicted RBP-0.5□□□□□ -2.49
CDH1-211ENST00000567320 SUPT6HQ7KZ85 1726 aaKnown RBP-0.5□□□□□ -2.49
CDH1-211ENST00000567320 PKD1L3Q7Z443 1732 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 NALCNQ8IZF0 1738 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 CRYBG1Q9Y4K1 1723 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 RELNP78509 3460 aa-0.5□□□□□ -2.49
CDH1-211ENST00000567320 hADV29S1A0JD25 119 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 C7orf77A4D0Y5 90 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 RGPD3A6NKT7 1758 aaPredicted RBP-0.51□□□□□ -2.49
CDH1-211ENST00000567320 FAM25AB3EWG3 89 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 FAM25CB3EWG5 89 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 FAM25GB3EWG6 89 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 H3BQF6 201 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 NDUFA2O43678 99 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 WIZO95785 1651 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 APOC2P02655 101 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 SMR3BP02814 79 aaPredicted RBP-0.51□□□□□ -2.49
CDH1-211ENST00000567320 COX6CP09669 75 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 ARMS2P0C7Q2 107 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 TRAPPC2P0DI81 140 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 TRAPPC2BP0DI82 140 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 PZPP20742 1482 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 GNGT1P63211 74 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 NIPBLQ6KC79 2804 aaeCLIP-0.51□□□□□ -2.49
CDH1-211ENST00000567320 RGPD4Q7Z3J3 1758 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 UBR1Q8IWV7 1749 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 C8orf59Q8N0T1 100 aaPredicted RBP-0.51□□□□□ -2.49
CDH1-211ENST00000567320 PFDN5Q99471 154 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 FAM135AQ9P2D6 1515 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 CELSR3Q9NYQ7 3312 aa-0.51□□□□□ -2.49
CDH1-211ENST00000567320 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.52□□□□□ -2.49
CDH1-211ENST00000567320 GOLGA4Q13439 2230 aaKnown RBP-0.52□□□□□ -2.49
CDH1-211ENST00000567320 DNAH1Q9P2D7 4330 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 KIF20BQ96Q89 1820 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 TIAM2Q8IVF5 1701 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 DOT1LQ8TEK3 1739 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 LRRC9Q6ZRR7 1453 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 MLH3Q9UHC1 1453 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 ROCK2O75116 1388 aaKnown RBP-0.52□□□□□ -2.49
CDH1-211ENST00000567320 KTN1Q86UP2 1357 aaKnown RBP-0.52□□□□□ -2.49
CDH1-211ENST00000567320 GCN1Q92616 2671 aaKnown RBP-0.52□□□□□ -2.49
CDH1-211ENST00000567320 PIGBOS1A0A0B4J2F0 54 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 F6UZH7 168 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 H7BZZ5 65 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 IGLC2P0DOY2 106 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 IGLC3P0DOY3 106 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 FGF7P21781 194 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 PSMG4Q5JS54 123 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 PYDC1Q8WXC3 89 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 COPS9Q8WXC6 57 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 C12orf57Q99622 126 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 SPANXA1Q9NS26 97 aa-0.52□□□□□ -2.49
CDH1-211ENST00000567320 CACFD1Q9UGQ2 172 aa-0.52□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms