RNA–Protein interactions for RNA: ENST00000567275.2

NIFKP4-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 4, humanhuman

BASIC

Gene NIFKP4, Length 1,192 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP4-201ENST00000567275 RAB5CP51148 216 aa4.23□□□□□ -1.73
NIFKP4-201ENST00000567275 ZNF664Q8N3J9 261 aa4.23□□□□□ -1.73
NIFKP4-201ENST00000567275 OR5A1Q8NGJ0 315 aa4.23□□□□□ -1.73
NIFKP4-201ENST00000567275 TNXBP22105 4242 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 HMSDA8MTL9 139 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 GNG4P50150 75 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 CENPWQ5EE01 88 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 LYZL1Q6UWQ5 148 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 SMIM15Q7Z3B0 74 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 BTF3L4Q96K17 158 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 CARD19Q96LW7 228 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 BATF3Q9NR55 127 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 PSORS1C2Q9UIG4 136 aa4.22□□□□□ -1.73
NIFKP4-201ENST00000567275 TRBV6-5A0A0K0K1A5 114 aa4.21□□□□□ -1.74
NIFKP4-201ENST00000567275 FGF6P10767 208 aa4.21□□□□□ -1.74
NIFKP4-201ENST00000567275 SMAGPQ0VAQ4 97 aa4.21□□□□□ -1.74
NIFKP4-201ENST00000567275 SS18Q15532 418 aa4.21□□□□□ -1.74
NIFKP4-201ENST00000567275 EIF5AL1Q6IS14 154 aaKnown RBP4.21□□□□□ -1.74
NIFKP4-201ENST00000567275 LOC107984640A0A0U1RRK4 108 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 LINC00959A0A1B0GUT2 108 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 TINCRA0A1B0GVN0 87 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 KANTRA0A1W2PQU2 76 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 SDHAF1A6NFY7 115 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 I3L3M4 83 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 ESDP10768 282 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 MEF2BQ02080 365 aaPredicted RBP4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 TSKUQ8WUA8 353 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 GNG13Q9P2W3 67 aa4.2□□□□□ -1.74
NIFKP4-201ENST00000567275 IGKV3OR2-268A0A0C4DH90 116 aa4.19□□□□□ -1.74
NIFKP4-201ENST00000567275 C1orf196B1AJZ1 125 aa4.19□□□□□ -1.74
NIFKP4-201ENST00000567275 XCL1P47992 114 aa4.19□□□□□ -1.74
NIFKP4-201ENST00000567275 PDZD11Q5EBL8 140 aa4.19□□□□□ -1.74
NIFKP4-201ENST00000567275 TRAPPC1Q9Y5R8 145 aa4.19□□□□□ -1.74
NIFKP4-201ENST00000567275 TRBV20OR9-2A0A075B6H5 130 aa4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 TRBV27A0A0K0K1C4 114 aa4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 A0A1B0GV50 99 aa4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 IGKV2-29A2NJV5 120 aaPredicted RBP4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 APOMO95445 188 aa4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 FOXA3P55318 350 aaPredicted RBP4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 FAM19A5Q7Z5A7 132 aaPredicted RBP4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 DIRC1Q969H9 104 aa4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 CDC42SE2Q9NRR3 84 aa4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 MED9Q9NWA0 146 aa4.18□□□□□ -1.74
NIFKP4-201ENST00000567275 TRAV26-2A0A0B4J265 109 aa4.17□□□□□ -1.74
NIFKP4-201ENST00000567275 C7orf77A4D0Y5 90 aa4.17□□□□□ -1.74
NIFKP4-201ENST00000567275 COX7A2LO14548 114 aa4.17□□□□□ -1.74
NIFKP4-201ENST00000567275 PPP1R17O96001 155 aa4.17□□□□□ -1.74
NIFKP4-201ENST00000567275 MT-ND6P03923 174 aa4.17□□□□□ -1.74
NIFKP4-201ENST00000567275 BCL2P10415 239 aa4.17□□□□□ -1.74
NIFKP4-201ENST00000567275 RGS21Q2M5E4 152 aa4.17□□□□□ -1.74
NIFKP4-201ENST00000567275 NUP35Q8NFH5 326 aa4.17□□□□□ -1.74
NIFKP4-201ENST00000567275 ST20Q9HBF5 79 aa4.17□□□□□ -1.74
NIFKP4-201ENST00000567275 A0A1W2PNN7 141 aa4.16□□□□□ -1.74
NIFKP4-201ENST00000567275 POLR2KP53803 58 aaKnown RBP4.16□□□□□ -1.74
NIFKP4-201ENST00000567275 KRTAP13-2Q52LG2 175 aa4.16□□□□□ -1.74
NIFKP4-201ENST00000567275 C9orf116Q5BN46 136 aaPredicted RBP4.16□□□□□ -1.74
NIFKP4-201ENST00000567275 OR10D4PQ8NGN7 298 aa4.16□□□□□ -1.74
NIFKP4-201ENST00000567275 RPL39LQ96EH5 51 aaKnown RBP4.16□□□□□ -1.74
NIFKP4-201ENST00000567275 A8MWP4 228 aa4.15□□□□□ -1.75
NIFKP4-201ENST00000567275 S100A6P06703 90 aa4.15□□□□□ -1.75
NIFKP4-201ENST00000567275 SCGB1D4Q6XE38 83 aa4.15□□□□□ -1.75
NIFKP4-201ENST00000567275 BORCS7Q96B45 105 aa4.15□□□□□ -1.75
NIFKP4-201ENST00000567275 LINC00526Q96FQ7 95 aa4.15□□□□□ -1.75
NIFKP4-201ENST00000567275 IMMP2LQ96T52 175 aa4.15□□□□□ -1.75
NIFKP4-201ENST00000567275 TIMM21Q9BVV7 248 aa4.15□□□□□ -1.75
NIFKP4-201ENST00000567275 TMEM191AQ9H0A3 160 aa4.15□□□□□ -1.75
NIFKP4-201ENST00000567275 MRPL35Q9NZE8 188 aaKnown RBP4.15□□□□□ -1.75
NIFKP4-201ENST00000567275 C1orf137Q5JT78 98 aa4.14□□□□□ -1.75
NIFKP4-201ENST00000567275 PACRGQ96M98 296 aaPredicted RBP4.14□□□□□ -1.75
NIFKP4-201ENST00000567275 RNASE7Q9H1E1 156 aaKnown RBP4.14□□□□□ -1.75
NIFKP4-201ENST00000567275 TMEM242Q9NWH2 141 aa4.14□□□□□ -1.75
NIFKP4-201ENST00000567275 CARHSP1Q9Y2V2 147 aaKnown RBP4.14□□□□□ -1.75
NIFKP4-201ENST00000567275 A0A1B0GUT8 65 aa4.13□□□□□ -1.75
NIFKP4-201ENST00000567275 LINC00614P0C842 121 aa4.13□□□□□ -1.75
NIFKP4-201ENST00000567275 FCER1GP30273 86 aa4.13□□□□□ -1.75
NIFKP4-201ENST00000567275 TMEM136Q6ZRR5 245 aa4.13□□□□□ -1.75
NIFKP4-201ENST00000567275 UBE2D4Q9Y2X8 147 aa4.13□□□□□ -1.75
NIFKP4-201ENST00000567275 LINC00862A6NCI5 91 aa4.12□□□□□ -1.75
NIFKP4-201ENST00000567275 H3BQ85 93 aa4.12□□□□□ -1.75
NIFKP4-201ENST00000567275 NDUFA1O15239 70 aa4.12□□□□□ -1.75
NIFKP4-201ENST00000567275 SPAG11BQ08648 103 aa4.12□□□□□ -1.75
NIFKP4-201ENST00000567275 SLC51BQ86UW2 128 aa4.12□□□□□ -1.75
NIFKP4-201ENST00000567275 TRAV13-1A0A0B4J241 112 aa4.11□□□□□ -1.75
NIFKP4-201ENST00000567275 HIGD1CA8MV81 97 aa4.11□□□□□ -1.75
NIFKP4-201ENST00000567275 MRPS36P82909 103 aaKnown RBP4.11□□□□□ -1.75
NIFKP4-201ENST00000567275 PHF5AQ7RTV0 110 aaKnown RBP4.11□□□□□ -1.75
NIFKP4-201ENST00000567275 C3orf22Q8N5N4 141 aa4.11□□□□□ -1.75
NIFKP4-201ENST00000567275 C20orf78Q9BR46 151 aa4.11□□□□□ -1.75
NIFKP4-201ENST00000567275 TRBV24-1A0A075B6N3 115 aa4.1□□□□□ -1.75
NIFKP4-201ENST00000567275 A6NED7 52 aa4.1□□□□□ -1.75
NIFKP4-201ENST00000567275 UBE2D1P51668 147 aa4.1□□□□□ -1.75
NIFKP4-201ENST00000567275 ADM2Q7Z4H4 148 aa4.1□□□□□ -1.75
NIFKP4-201ENST00000567275 C5orf38Q86SI9 138 aa4.1□□□□□ -1.75
NIFKP4-201ENST00000567275 SMDT1Q9H4I9 107 aa4.1□□□□□ -1.75
NIFKP4-201ENST00000567275 OSTCQ9NRP0 149 aa4.1□□□□□ -1.75
NIFKP4-201ENST00000567275 SPANXA1Q9NS26 97 aa4.1□□□□□ -1.75
NIFKP4-201ENST00000567275 A0A0B4J2C4 111 aa4.09□□□□□ -1.75
NIFKP4-201ENST00000567275 TRBV30A0A0K0K1B3 111 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms