RNA–Protein interactions for RNA: ENST00000566247.1

TRADD-205, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-205ENST00000566247 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
TRADD-205ENST00000566247 MYMXA0A1B0GTQ4 84 aa11.09□□□□□ -0.63
TRADD-205ENST00000566247 GAGE10A6NGK3 116 aa11.09□□□□□ -0.63
TRADD-205ENST00000566247 SYS1-DBNDD2H3BUS1 97 aa11.09□□□□□ -0.63
TRADD-205ENST00000566247 IGLV5-37A0A075B6J1 123 aa11.08□□□□□ -0.64
TRADD-205ENST00000566247 COA6Q5JTJ3 125 aaKnown RBP11.08□□□□□ -0.64
TRADD-205ENST00000566247 LINC00167Q96N53 147 aa11.08□□□□□ -0.64
TRADD-205ENST00000566247 LRP1Q07954 4544 aaKnown RBP11.08□□□□□ -0.64
TRADD-205ENST00000566247 FAT3Q8TDW7 4589 aa11.07□□□□□ -0.64
TRADD-205ENST00000566247 RPL37AP8A6NKH3 93 aa11.07□□□□□ -0.64
TRADD-205ENST00000566247 SMIM13P0DJ93 91 aa11.07□□□□□ -0.64
TRADD-205ENST00000566247 RPL24P83731 157 aaKnown RBP11.07□□□□□ -0.64
TRADD-205ENST00000566247 DIRC1Q969H9 104 aa11.07□□□□□ -0.64
TRADD-205ENST00000566247 LINC00587B1AMM8 73 aa11.06□□□□□ -0.64
TRADD-205ENST00000566247 J3QQQ9 107 aa11.06□□□□□ -0.64
TRADD-205ENST00000566247 LGALS3P17931 250 aaKnown RBP11.06□□□□□ -0.64
TRADD-205ENST00000566247 TSPEAR-AS2P59090 65 aa11.06□□□□□ -0.64
TRADD-205ENST00000566247 PET117Q6UWS5 81 aa11.05□□□□□ -0.64
TRADD-205ENST00000566247 VPREB1P12018 145 aa11.04□□□□□ -0.64
TRADD-205ENST00000566247 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
TRADD-205ENST00000566247 HERC1Q15751 4861 aa11.04□□□□□ -0.64
TRADD-205ENST00000566247 NMUP48645 174 aa11.03□□□□□ -0.64
TRADD-205ENST00000566247 KRTDAPP60985 99 aa11.03□□□□□ -0.64
TRADD-205ENST00000566247 LINC01545Q5VT33 79 aa11.03□□□□□ -0.64
TRADD-205ENST00000566247 MIR7-3HGQ8N6C7 128 aa11.03□□□□□ -0.64
TRADD-205ENST00000566247 H0Y9J4 135 aa11.02□□□□□ -0.65
TRADD-205ENST00000566247 C3orf79P0CE67 100 aa11.02□□□□□ -0.65
TRADD-205ENST00000566247 MT1HL1P0DM35 61 aa11.02□□□□□ -0.65
TRADD-205ENST00000566247 IGKV2-28A0A075B6P5 120 aa11.01□□□□□ -0.65
TRADD-205ENST00000566247 BCE1O60756 84 aa11.01□□□□□ -0.65
TRADD-205ENST00000566247 IGKV2D-28P01615 120 aa11.01□□□□□ -0.65
TRADD-205ENST00000566247 E9PLD3 99 aa11□□□□□ -0.65
TRADD-205ENST00000566247 C20orf202A1L168 122 aa10.99□□□□□ -0.65
TRADD-205ENST00000566247 ZNF861PO60384 105 aa10.99□□□□□ -0.65
TRADD-205ENST00000566247 BOD1L2Q8IYS8 172 aa10.99□□□□□ -0.65
TRADD-205ENST00000566247 Q8NDZ9 215 aa10.99□□□□□ -0.65
TRADD-205ENST00000566247 RPL28P46779 137 aaKnown RBP10.98□□□□□ -0.65
TRADD-205ENST00000566247 UBE2AP49459 152 aa10.97□□□□□ -0.65
TRADD-205ENST00000566247 IGLV1-50A0A075B6I6 118 aa10.96□□□□□ -0.65
TRADD-205ENST00000566247 DAND5Q8N907 189 aa10.96□□□□□ -0.65
TRADD-205ENST00000566247 M0R378 163 aa10.95□□□□□ -0.66
TRADD-205ENST00000566247 NCR3O14931 201 aa10.94□□□□□ -0.66
TRADD-205ENST00000566247 S100A2P29034 98 aa10.94□□□□□ -0.66
TRADD-205ENST00000566247 MIEN1Q9BRT3 115 aa10.94□□□□□ -0.66
TRADD-205ENST00000566247 S100A6P06703 90 aa10.93□□□□□ -0.66
TRADD-205ENST00000566247 TMEM126AQ9H061 195 aa10.93□□□□□ -0.66
TRADD-205ENST00000566247 A0A0J9YXY3 114 aa10.92□□□□□ -0.66
TRADD-205ENST00000566247 TMEM238C9JI98 176 aa10.92□□□□□ -0.66
TRADD-205ENST00000566247 KRTAP10-8P60410 259 aa10.92□□□□□ -0.66
TRADD-205ENST00000566247 FAM19A1Q7Z5A9 133 aa10.92□□□□□ -0.66
TRADD-205ENST00000566247 IGKV2D-26A0A0A0MRZ7 120 aa10.9□□□□□ -0.66
TRADD-205ENST00000566247 AKR1D1P51857 326 aa10.9□□□□□ -0.66
TRADD-205ENST00000566247 HIST3H2BBQ8N257 126 aa10.9□□□□□ -0.66
TRADD-205ENST00000566247 ZNF815PA8K554 130 aa10.89□□□□□ -0.67
TRADD-205ENST00000566247 PRR26Q8N8Z3 221 aa10.89□□□□□ -0.67
TRADD-205ENST00000566247 LOC107984156A0A0G2JMH3 177 aa10.88□□□□□ -0.67
TRADD-205ENST00000566247 KRTAP1-4P0C5Y4 121 aa10.88□□□□□ -0.67
TRADD-205ENST00000566247 NPC2P61916 151 aa10.88□□□□□ -0.67
TRADD-205ENST00000566247 PRLHP81277 87 aa10.88□□□□□ -0.67
TRADD-205ENST00000566247 ARL17AQ8IVW1 177 aa10.88□□□□□ -0.67
TRADD-205ENST00000566247 ATOH7Q8N100 152 aa10.88□□□□□ -0.67
TRADD-205ENST00000566247 HIST1H2BLQ99880 126 aa10.88□□□□□ -0.67
TRADD-205ENST00000566247 S100A12P80511 92 aa10.87□□□□□ -0.67
TRADD-205ENST00000566247 KRTAP13-1Q8IUC0 172 aa10.87□□□□□ -0.67
TRADD-205ENST00000566247 PRYO14603 147 aa10.86□□□□□ -0.67
TRADD-205ENST00000566247 ADAMTSL4-AS1Q5T5F5 129 aa10.86□□□□□ -0.67
TRADD-205ENST00000566247 TTTY13Q9BZ97 58 aa10.86□□□□□ -0.67
TRADD-205ENST00000566247 SPANXB1Q9NS25 103 aaPredicted RBP10.85□□□□□ -0.67
TRADD-205ENST00000566247 TNXBP22105 4242 aa10.84□□□□□ -0.67
TRADD-205ENST00000566247 TRBV10-3A0A0K0K1G6 114 aa10.84□□□□□ -0.67
TRADD-205ENST00000566247 TRBV10-2A0A0K0K1G8 114 aa10.84□□□□□ -0.67
TRADD-205ENST00000566247 TIMM17BO60830 172 aa10.84□□□□□ -0.67
TRADD-205ENST00000566247 RPL13AP40429 203 aaKnown RBP10.84□□□□□ -0.67
TRADD-205ENST00000566247 ANKRD39Q53RE8 183 aa10.84□□□□□ -0.67
TRADD-205ENST00000566247 NDUFC2O95298 119 aa10.83□□□□□ -0.68
TRADD-205ENST00000566247 DDTP30046 118 aa10.82□□□□□ -0.68
TRADD-205ENST00000566247 SNRPEP62304 92 aaKnown RBP10.82□□□□□ -0.68
TRADD-205ENST00000566247 S100A7L2Q5SY68 101 aa10.82□□□□□ -0.68
TRADD-205ENST00000566247 SOSTDC1Q6X4U4 206 aa10.82□□□□□ -0.68
TRADD-205ENST00000566247 SCGB1D4Q6XE38 83 aa10.82□□□□□ -0.68
TRADD-205ENST00000566247 KCNQ1DNQ9H478 68 aa10.82□□□□□ -0.68
TRADD-205ENST00000566247 ETDCA0A1B0GVM5 59 aa10.81□□□□□ -0.68
TRADD-205ENST00000566247 LITAFQ99732 161 aa10.81□□□□□ -0.68
TRADD-205ENST00000566247 HIGD2AQ9BW72 106 aa10.81□□□□□ -0.68
TRADD-205ENST00000566247 EIF4EBP3O60516 100 aaPredicted RBP10.8□□□□□ -0.68
TRADD-205ENST00000566247 LINC00308Q8TCZ7 52 aa10.8□□□□□ -0.68
TRADD-205ENST00000566247 LINC00337Q8N6G1 96 aa10.79□□□□□ -0.68
TRADD-205ENST00000566247 HSBP1L1C9JCN9 74 aa10.78□□□□□ -0.68
TRADD-205ENST00000566247 CRYGAP11844 174 aa10.78□□□□□ -0.68
TRADD-205ENST00000566247 SPRR1AP35321 89 aa10.78□□□□□ -0.68
TRADD-205ENST00000566247 SPANXCQ9NY87 97 aa10.78□□□□□ -0.68
TRADD-205ENST00000566247 ANAPC11Q9NYG5 84 aa10.77□□□□□ -0.69
TRADD-205ENST00000566247 PCP2Q8IVA1 136 aa10.76□□□□□ -0.69
TRADD-205ENST00000566247 A0A087X002 238 aa10.75□□□□□ -0.69
TRADD-205ENST00000566247 C5orf52A6NGY3 159 aa10.75□□□□□ -0.69
TRADD-205ENST00000566247 IGLV6-57P01721 117 aa10.75□□□□□ -0.69
TRADD-205ENST00000566247 TRAV23DV6A0A075B6W5 121 aa10.74□□□□□ -0.69
TRADD-205ENST00000566247 SCGB1D1O95968 90 aa10.74□□□□□ -0.69
TRADD-205ENST00000566247 OR13C6PQ8NH95 151 aa10.74□□□□□ -0.69
TRADD-205ENST00000566247 COPS9Q8WXC6 57 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms