RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 KRTAP9-7A8MTY7 169 aa5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 H0Y8G0 127 aa5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 SPINK8P0C7L1 97 aa5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 TLX1NBP0CAT3 122 aa5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 C3orf79P0CE67 100 aa5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 PTTG1IPP53801 180 aa5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 HERVK_113P61574 105 aa5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 SNRPEP62304 92 aaKnown RBP5.39□□□□□ -1.55
VPS9D1-205ENST00000565452 KRTAP1-4P0C5Y4 121 aa5.38□□□□□ -1.55
VPS9D1-205ENST00000565452 UNQ6190/PRO20217Q6UXQ8 127 aa5.38□□□□□ -1.55
VPS9D1-205ENST00000565452 LINC00526Q96FQ7 95 aa5.38□□□□□ -1.55
VPS9D1-205ENST00000565452 HIST1H2BLQ99880 126 aa5.38□□□□□ -1.55
VPS9D1-205ENST00000565452 LINC00587B1AMM8 73 aa5.37□□□□□ -1.55
VPS9D1-205ENST00000565452 KRTDAPP60985 99 aa5.37□□□□□ -1.55
VPS9D1-205ENST00000565452 COX17Q14061 63 aa5.37□□□□□ -1.55
VPS9D1-205ENST00000565452 C9orf116Q5BN46 136 aaPredicted RBP5.37□□□□□ -1.55
VPS9D1-205ENST00000565452 PLEKHB2Q96CS7 222 aa5.37□□□□□ -1.55
VPS9D1-205ENST00000565452 LEPROTO15243 131 aa5.36□□□□□ -1.55
VPS9D1-205ENST00000565452 CRYGAP11844 174 aa5.36□□□□□ -1.55
VPS9D1-205ENST00000565452 HERV-K104P63124 156 aa5.36□□□□□ -1.55
VPS9D1-205ENST00000565452 C2orf82Q6UX34 121 aa5.36□□□□□ -1.55
VPS9D1-205ENST00000565452 PHF5AQ7RTV0 110 aaKnown RBP5.36□□□□□ -1.55
VPS9D1-205ENST00000565452 C6orf48Q9UBA6 75 aa5.36□□□□□ -1.55
VPS9D1-205ENST00000565452 MYMXA0A1B0GTQ4 84 aa5.35□□□□□ -1.55
VPS9D1-205ENST00000565452 NDUFC2-KCTD14E9PQ53 114 aa5.35□□□□□ -1.55
VPS9D1-205ENST00000565452 NMUP48645 174 aa5.35□□□□□ -1.55
VPS9D1-205ENST00000565452 C10orf25Q5T742 122 aa5.35□□□□□ -1.55
VPS9D1-205ENST00000565452 E9PLD3 99 aa5.34□□□□□ -1.55
VPS9D1-205ENST00000565452 TPRXLQ17RH7 258 aa5.34□□□□□ -1.55
VPS9D1-205ENST00000565452 PMCHL2Q9BQD1 86 aa5.34□□□□□ -1.55
VPS9D1-205ENST00000565452 J3QQQ9 107 aa5.33□□□□□ -1.56
VPS9D1-205ENST00000565452 ZNF625Q96I27 306 aaPredicted RBP5.33□□□□□ -1.56
VPS9D1-205ENST00000565452 NDUFA12Q9UI09 145 aa5.33□□□□□ -1.56
VPS9D1-205ENST00000565452 IGLV7-46A0A075B6I9 117 aa5.32□□□□□ -1.56
VPS9D1-205ENST00000565452 LGALS3P17931 250 aaKnown RBP5.32□□□□□ -1.56
VPS9D1-205ENST00000565452 RPL18AQ02543 176 aaKnown RBP5.32□□□□□ -1.56
VPS9D1-205ENST00000565452 HSBP1L1C9JCN9 74 aa5.31□□□□□ -1.56
VPS9D1-205ENST00000565452 ERG28Q9UKR5 140 aa5.31□□□□□ -1.56
VPS9D1-205ENST00000565452 SCGB1D1O95968 90 aa5.3□□□□□ -1.56
VPS9D1-205ENST00000565452 GAGE2EQ4V326 116 aa5.3□□□□□ -1.56
VPS9D1-205ENST00000565452 TYMSOSQ8TAI1 123 aa5.3□□□□□ -1.56
VPS9D1-205ENST00000565452 GAGE2DQ9UEU5 116 aa5.3□□□□□ -1.56
VPS9D1-205ENST00000565452 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.29□□□□□ -1.56
VPS9D1-205ENST00000565452 PFN2P35080 140 aa5.29□□□□□ -1.56
VPS9D1-205ENST00000565452 LINC00158P58513 81 aa5.29□□□□□ -1.56
VPS9D1-205ENST00000565452 JOSD1Q15040 202 aaPredicted RBP5.29□□□□□ -1.56
VPS9D1-205ENST00000565452 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
VPS9D1-205ENST00000565452 CFC1BP0CG36 223 aa5.28□□□□□ -1.56
VPS9D1-205ENST00000565452 RPL24P83731 157 aaKnown RBP5.28□□□□□ -1.56
VPS9D1-205ENST00000565452 MEIG1Q5JSS6 88 aa5.28□□□□□ -1.56
VPS9D1-205ENST00000565452 TP73-AS1Q9UF72 201 aa5.28□□□□□ -1.56
VPS9D1-205ENST00000565452 TMA7Q9Y2S6 64 aaKnown RBP5.28□□□□□ -1.56
VPS9D1-205ENST00000565452 LOC107984156A0A0G2JMH3 177 aa5.27□□□□□ -1.57
VPS9D1-205ENST00000565452 TIMM17BO60830 172 aa5.27□□□□□ -1.57
VPS9D1-205ENST00000565452 TSPEAR-AS2P59090 65 aa5.27□□□□□ -1.57
VPS9D1-205ENST00000565452 LBHQ53QV2 105 aaPredicted RBP5.27□□□□□ -1.57
VPS9D1-205ENST00000565452 C9orf129Q5T035 196 aaKnown RBP5.27□□□□□ -1.57
VPS9D1-205ENST00000565452 KRTAP11-1Q8IUC1 163 aa5.27□□□□□ -1.57
VPS9D1-205ENST00000565452 ARL17AQ8IVW1 177 aa5.27□□□□□ -1.57
VPS9D1-205ENST00000565452 LINC00337Q8N6G1 96 aa5.27□□□□□ -1.57
VPS9D1-205ENST00000565452 IGLV5-37A0A075B6J1 123 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 A0A0J9YXY3 114 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 ZNF815PA8K554 130 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 ZNF861PO60384 105 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 SMIM13P0DJ93 91 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 UBE2BP63146 152 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 ASB16-AS1Q495Z4 193 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 ANKRD39Q53RE8 183 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 Q6ZVH6 145 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 ATOH7Q8N100 152 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 COPS9Q8WXC6 57 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 PPDPFQ9H3Y8 114 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 SND1-IT1Q9HBX3 110 aa5.26□□□□□ -1.57
VPS9D1-205ENST00000565452 IGKV2D-26A0A0A0MRZ7 120 aa5.25□□□□□ -1.57
VPS9D1-205ENST00000565452 MIR7-3HGQ8N6C7 128 aa5.25□□□□□ -1.57
VPS9D1-205ENST00000565452 XAGE1AQ9HD64 81 aa5.25□□□□□ -1.57
VPS9D1-205ENST00000565452 CTAG1AP78358 180 aa5.24□□□□□ -1.57
VPS9D1-205ENST00000565452 SCGB1D4Q6XE38 83 aa5.24□□□□□ -1.57
VPS9D1-205ENST00000565452 MIEN1Q9BRT3 115 aa5.24□□□□□ -1.57
VPS9D1-205ENST00000565452 C22orf24Q9Y442 160 aa5.24□□□□□ -1.57
VPS9D1-205ENST00000565452 A0A087X002 238 aa5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 A0A0U1RRA0 63 aa5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 FAM168BA1KXE4 195 aa5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 TMEM238C9JI98 176 aa5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 DLEU1O43261 78 aa5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 NDUFC2O95298 119 aa5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 IFITM1P13164 125 aa5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 SEC61BP60468 96 aaKnown RBP5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 FAM19A5Q7Z5A7 132 aaPredicted RBP5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 NKAPP1Q8N9T2 125 aa5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 VAMP8Q9BV40 100 aa5.23□□□□□ -1.57
VPS9D1-205ENST00000565452 M0QXV9 152 aa5.22□□□□□ -1.57
VPS9D1-205ENST00000565452 COX8AP10176 69 aa5.22□□□□□ -1.57
VPS9D1-205ENST00000565452 MRPL55Q7Z7F7 128 aaKnown RBP5.22□□□□□ -1.57
VPS9D1-205ENST00000565452 PCP2Q8IVA1 136 aa5.22□□□□□ -1.57
VPS9D1-205ENST00000565452 LINC00304Q8N9R0 145 aa5.22□□□□□ -1.57
VPS9D1-205ENST00000565452 SPANXDQ9BXN6 97 aa5.22□□□□□ -1.57
VPS9D1-205ENST00000565452 SPANXCQ9NY87 97 aa5.22□□□□□ -1.57
VPS9D1-205ENST00000565452 TRBV10-2A0A0K0K1G8 114 aa5.21□□□□□ -1.58
VPS9D1-205ENST00000565452 M0R378 163 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms