RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 LECT2O14960 151 aa12.8□□□□□ -0.36
CLN6-205ENST00000564846 WWC2-AS2Q96NR7 200 aa12.8□□□□□ -0.36
CLN6-205ENST00000564846 SLPIP03973 132 aa12.79□□□□□ -0.36
CLN6-205ENST00000564846 RPL28P46779 137 aaKnown RBP12.79□□□□□ -0.36
CLN6-205ENST00000564846 OR13C6PQ8NH95 151 aa12.79□□□□□ -0.36
CLN6-205ENST00000564846 TENM2Q9NT68 2774 aa12.79□□□□□ -0.36
CLN6-205ENST00000564846 PRR3P79522 188 aaKnown RBP12.79□□□□□ -0.36
CLN6-205ENST00000564846 XAGE1AQ9HD64 81 aa12.79□□□□□ -0.36
CLN6-205ENST00000564846 TLX1NBP0CAT3 122 aa12.78□□□□□ -0.36
CLN6-205ENST00000564846 ATXN8Q156A1 80 aa12.78□□□□□ -0.36
CLN6-205ENST00000564846 F8W1H4 67 aa12.77□□□□□ -0.36
CLN6-205ENST00000564846 Q8NDZ9 215 aa12.77□□□□□ -0.36
CLN6-205ENST00000564846 Q6ZRP5 223 aa12.76□□□□□ -0.37
CLN6-205ENST00000564846 TMEM126AQ9H061 195 aa12.76□□□□□ -0.37
CLN6-205ENST00000564846 TRBV10-2A0A0K0K1G8 114 aa12.76□□□□□ -0.37
CLN6-205ENST00000564846 C14orf177Q52M58 125 aa12.76□□□□□ -0.37
CLN6-205ENST00000564846 SMIM11BQ8TCY0 68 aa12.76□□□□□ -0.37
CLN6-205ENST00000564846 VPS13DQ5THJ4 4388 aa12.76□□□□□ -0.37
CLN6-205ENST00000564846 WFDC2Q14508 124 aa12.75□□□□□ -0.37
CLN6-205ENST00000564846 NCR3O14931 201 aa12.74□□□□□ -0.37
CLN6-205ENST00000564846 GAGE2EQ4V326 116 aa12.74□□□□□ -0.37
CLN6-205ENST00000564846 GAGE2DQ9UEU5 116 aa12.74□□□□□ -0.37
CLN6-205ENST00000564846 PRO0461Q9UI25 63 aa12.73□□□□□ -0.37
CLN6-205ENST00000564846 LST1O00453 97 aa12.72□□□□□ -0.37
CLN6-205ENST00000564846 S100A7L2Q5SY68 101 aa12.72□□□□□ -0.37
CLN6-205ENST00000564846 Q6ZRN7 208 aaPredicted RBP12.72□□□□□ -0.37
CLN6-205ENST00000564846 CLEC2BQ92478 149 aa12.72□□□□□ -0.37
CLN6-205ENST00000564846 CNBPP62633 177 aaKnown RBP12.71□□□□□ -0.37
CLN6-205ENST00000564846 RPL18AQ02543 176 aaKnown RBP12.71□□□□□ -0.38
CLN6-205ENST00000564846 M0R2N4 97 aa12.7□□□□□ -0.38
CLN6-205ENST00000564846 VPREB1P12018 145 aa12.7□□□□□ -0.38
CLN6-205ENST00000564846 LINC01620Q4KN68 170 aa12.69□□□□□ -0.38
CLN6-205ENST00000564846 C9orf129Q5T035 196 aaKnown RBP12.69□□□□□ -0.38
CLN6-205ENST00000564846 LRCOL1A6NCL2 159 aa12.69□□□□□ -0.38
CLN6-205ENST00000564846 H0YGX0 51 aa12.69□□□□□ -0.38
CLN6-205ENST00000564846 IGLV6-57P01721 117 aa12.69□□□□□ -0.38
CLN6-205ENST00000564846 MTURNQ8N3F0 131 aa12.69□□□□□ -0.38
CLN6-205ENST00000564846 DNAH10Q8IVF4 4471 aa12.68□□□□□ -0.38
CLN6-205ENST00000564846 LOC107984640A0A0U1RRK4 108 aa12.68□□□□□ -0.38
CLN6-205ENST00000564846 Q6ZR54 194 aa12.68□□□□□ -0.38
CLN6-205ENST00000564846 C9JAW5 83 aa12.66□□□□□ -0.38
CLN6-205ENST00000564846 C3orf84H3BNL1 204 aa12.66□□□□□ -0.38
CLN6-205ENST00000564846 M0R378 163 aa12.66□□□□□ -0.38
CLN6-205ENST00000564846 PLA2G2DQ9UNK4 145 aa12.66□□□□□ -0.38
CLN6-205ENST00000564846 SLC25A20O43772 301 aa12.64□□□□□ -0.39
CLN6-205ENST00000564846 LY6G6CO95867 125 aa12.64□□□□□ -0.39
CLN6-205ENST00000564846 SMCPP49901 116 aaPredicted RBP12.64□□□□□ -0.39
CLN6-205ENST00000564846 TRACP01848 142 aa12.64□□□□□ -0.39
CLN6-205ENST00000564846 TGP01266 2768 aa12.63□□□□□ -0.39
CLN6-205ENST00000564846 TRBV10-3A0A0K0K1G6 114 aa12.63□□□□□ -0.39
CLN6-205ENST00000564846 M0QXV9 152 aa12.63□□□□□ -0.39
CLN6-205ENST00000564846 GAGE2BQ13066 116 aa12.63□□□□□ -0.39
CLN6-205ENST00000564846 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.62□□□□□ -0.39
CLN6-205ENST00000564846 LINC00476Q8WZB0 136 aa12.62□□□□□ -0.39
CLN6-205ENST00000564846 FAM218AQ96MZ4 157 aa12.62□□□□□ -0.39
CLN6-205ENST00000564846 CBY1Q9Y3M2 126 aa12.61□□□□□ -0.39
CLN6-205ENST00000564846 NKAPP1Q8N9T2 125 aa12.61□□□□□ -0.39
CLN6-205ENST00000564846 LINC01600Q96MT4 127 aa12.61□□□□□ -0.39
CLN6-205ENST00000564846 C6orf99Q4VX62 202 aa12.6□□□□□ -0.39
CLN6-205ENST00000564846 SERTAD4-AS1Q5TG53 156 aa12.6□□□□□ -0.39
CLN6-205ENST00000564846 TRAV23DV6A0A075B6W5 121 aa12.59□□□□□ -0.39
CLN6-205ENST00000564846 ETDBQ3ZM63 59 aa12.59□□□□□ -0.39
CLN6-205ENST00000564846 ANKRD29Q8N6D5 301 aa12.59□□□□□ -0.39
CLN6-205ENST00000564846 IGLV5-37A0A075B6J1 123 aa12.58□□□□□ -0.39
CLN6-205ENST00000564846 H3BT86 120 aa12.58□□□□□ -0.39
CLN6-205ENST00000564846 Q8N814 137 aa12.58□□□□□ -0.39
CLN6-205ENST00000564846 PKIGQ9Y2B9 76 aa12.58□□□□□ -0.39
CLN6-205ENST00000564846 C16orf90A8MZG2 172 aa12.58□□□□□ -0.4
CLN6-205ENST00000564846 A0A087WYN8 130 aa12.57□□□□□ -0.4
CLN6-205ENST00000564846 C1orf134Q5TEV5 83 aa12.57□□□□□ -0.4
CLN6-205ENST00000564846 A0A087WTM6 91 aa12.56□□□□□ -0.4
CLN6-205ENST00000564846 C9orf163Q8N9P6 203 aa12.56□□□□□ -0.4
CLN6-205ENST00000564846 A0A1B0GX51 115 aa12.56□□□□□ -0.4
CLN6-205ENST00000564846 OCIAD2Q56VL3 154 aa12.56□□□□□ -0.4
CLN6-205ENST00000564846 ZNF73O43830 326 aaPredicted RBP12.55□□□□□ -0.4
CLN6-205ENST00000564846 DNAL4O96015 105 aa12.55□□□□□ -0.4
CLN6-205ENST00000564846 TEN1Q86WV5 123 aa12.55□□□□□ -0.4
CLN6-205ENST00000564846 DIRC1Q969H9 104 aa12.55□□□□□ -0.4
CLN6-205ENST00000564846 A0A096LNI7 61 aa12.54□□□□□ -0.4
CLN6-205ENST00000564846 FAM168BA1KXE4 195 aa12.54□□□□□ -0.4
CLN6-205ENST00000564846 C7orf33Q8WU49 177 aa12.54□□□□□ -0.4
CLN6-205ENST00000564846 KMT2AQ03164 3969 aa12.54□□□□□ -0.4
CLN6-205ENST00000564846 TRBV7-6A0A0J9YX20 115 aa12.52□□□□□ -0.41
CLN6-205ENST00000564846 SNCGO76070 127 aa12.52□□□□□ -0.41
CLN6-205ENST00000564846 DNAH6Q9C0G6 4158 aa12.52□□□□□ -0.41
CLN6-205ENST00000564846 K7ERU9 68 aa12.51□□□□□ -0.41
CLN6-205ENST00000564846 KRTAP7-1Q8IUC3 87 aa12.51□□□□□ -0.41
CLN6-205ENST00000564846 C22orf24Q9Y442 160 aa12.51□□□□□ -0.41
CLN6-205ENST00000564846 ALMS1Q8TCU4 4167 aa12.51□□□□□ -0.41
CLN6-205ENST00000564846 IGKV2-24A0A0C4DH68 120 aa12.51□□□□□ -0.41
CLN6-205ENST00000564846 FAM19A5Q7Z5A7 132 aaPredicted RBP12.51□□□□□ -0.41
CLN6-205ENST00000564846 LINC00575Q6W349 94 aa12.5□□□□□ -0.41
CLN6-205ENST00000564846 KCNQ1DNQ9H478 68 aa12.5□□□□□ -0.41
CLN6-205ENST00000564846 BAALC-AS2P0C853 105 aa12.49□□□□□ -0.41
CLN6-205ENST00000564846 MRPL55Q7Z7F7 128 aaKnown RBP12.49□□□□□ -0.41
CLN6-205ENST00000564846 SDIM1Q6ZPB5 146 aa12.48□□□□□ -0.41
CLN6-205ENST00000564846 LINC00167Q96N53 147 aa12.48□□□□□ -0.41
CLN6-205ENST00000564846 COX7BP24311 80 aa12.48□□□□□ -0.41
CLN6-205ENST00000564846 PPDPFLQ8WWR9 84 aa12.48□□□□□ -0.41
CLN6-205ENST00000564846 DNAH2Q9P225 4427 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms