RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 ERG28Q9UKR5 140 aa4.84□□□□□ -1.63
GINS3-205ENST00000564814 DYNC1H1Q14204 4646 aaKnown RBP4.84□□□□□ -1.63
GINS3-205ENST00000564814 EPM2AB3EWF7 344 aa4.83□□□□□ -1.64
GINS3-205ENST00000564814 TMEM238C9JI98 176 aa4.83□□□□□ -1.64
GINS3-205ENST00000564814 LECT2O14960 151 aa4.83□□□□□ -1.64
GINS3-205ENST00000564814 SMIM13P0DJ93 91 aa4.83□□□□□ -1.64
GINS3-205ENST00000564814 CIRBPQ14011 172 aaKnown RBP4.83□□□□□ -1.64
GINS3-205ENST00000564814 TTTY13Q9BZ97 58 aa4.83□□□□□ -1.64
GINS3-205ENST00000564814 LOC107984640A0A0U1RRK4 108 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 C9orf118A6NHY6 69 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 C16orf90A8MZG2 172 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 IFITM1P13164 125 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 MEIG1Q5JSS6 88 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 SDIM1Q6ZPB5 146 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 COPS9Q8WXC6 57 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 LINC00526Q96FQ7 95 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 LINC00474Q9P2X8 69 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 PLA2G2DQ9UNK4 145 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 DNAH11Q96DT5 4516 aa4.82□□□□□ -1.64
GINS3-205ENST00000564814 TMEM238LA0A1B0GVL6 79 aa4.81□□□□□ -1.64
GINS3-205ENST00000564814 GAGE10A6NGK3 116 aa4.81□□□□□ -1.64
GINS3-205ENST00000564814 A6NJY4 79 aa4.81□□□□□ -1.64
GINS3-205ENST00000564814 FABP2P12104 132 aa4.81□□□□□ -1.64
GINS3-205ENST00000564814 SCGB1D4Q6XE38 83 aa4.81□□□□□ -1.64
GINS3-205ENST00000564814 Q6ZRP5 223 aa4.81□□□□□ -1.64
GINS3-205ENST00000564814 Q6ZSA8 131 aa4.81□□□□□ -1.64
GINS3-205ENST00000564814 CEND1Q8N111 149 aa4.81□□□□□ -1.64
GINS3-205ENST00000564814 HIST1H4GQ99525 98 aa4.81□□□□□ -1.64
GINS3-205ENST00000564814 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.8□□□□□ -1.64
GINS3-205ENST00000564814 NDUFC2O95298 119 aa4.8□□□□□ -1.64
GINS3-205ENST00000564814 MIR7-3HGQ8N6C7 128 aa4.8□□□□□ -1.64
GINS3-205ENST00000564814 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
GINS3-205ENST00000564814 IGLV5-37A0A075B6J1 123 aa4.79□□□□□ -1.64
GINS3-205ENST00000564814 IGLV5-52A0A0A0MRZ9 124 aa4.79□□□□□ -1.64
GINS3-205ENST00000564814 H3BUT2 72 aa4.79□□□□□ -1.64
GINS3-205ENST00000564814 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
GINS3-205ENST00000564814 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
GINS3-205ENST00000564814 ADAMTSL4-AS1Q5T5F5 129 aa4.79□□□□□ -1.64
GINS3-205ENST00000564814 RAB37Q96AX2 223 aa4.79□□□□□ -1.64
GINS3-205ENST00000564814 A0A1W2PPM0 123 aa4.78□□□□□ -1.64
GINS3-205ENST00000564814 K7EP34 96 aa4.78□□□□□ -1.64
GINS3-205ENST00000564814 LINC00158P58513 81 aa4.78□□□□□ -1.64
GINS3-205ENST00000564814 LINC00308Q8TCZ7 52 aa4.78□□□□□ -1.64
GINS3-205ENST00000564814 SPACA4Q8TDM5 124 aa4.78□□□□□ -1.64
GINS3-205ENST00000564814 SND1-IT1Q9HBX3 110 aa4.78□□□□□ -1.64
GINS3-205ENST00000564814 NHP2Q9NX24 153 aaKnown RBP4.78□□□□□ -1.64
GINS3-205ENST00000564814 A0A096LNI7 61 aa4.77□□□□□ -1.65
GINS3-205ENST00000564814 TRBV10-2A0A0K0K1G8 114 aa4.77□□□□□ -1.65
GINS3-205ENST00000564814 KRTAP9-6A0A140TA67 174 aa4.77□□□□□ -1.65
GINS3-205ENST00000564814 PFN2P35080 140 aa4.77□□□□□ -1.65
GINS3-205ENST00000564814 FXYD2P54710 66 aa4.77□□□□□ -1.65
GINS3-205ENST00000564814 SRSF9Q13242 221 aaKnown RBP eCLIP4.77□□□□□ -1.65
GINS3-205ENST00000564814 C9orf129Q5T035 196 aaKnown RBP4.77□□□□□ -1.65
GINS3-205ENST00000564814 LYRM7Q5U5X0 104 aa4.77□□□□□ -1.65
GINS3-205ENST00000564814 SOSTDC1Q6X4U4 206 aa4.77□□□□□ -1.65
GINS3-205ENST00000564814 CBY1Q9Y3M2 126 aa4.77□□□□□ -1.65
GINS3-205ENST00000564814 SPCS1Q9Y6A9 102 aa4.77□□□□□ -1.65
GINS3-205ENST00000564814 VPREB1P12018 145 aa4.76□□□□□ -1.65
GINS3-205ENST00000564814 RPL24P83731 157 aaKnown RBP4.76□□□□□ -1.65
GINS3-205ENST00000564814 PLAC8Q9NZF1 115 aa4.76□□□□□ -1.65
GINS3-205ENST00000564814 DMBT1Q9UGM3 2413 aaPredicted RBP4.76□□□□□ -1.65
GINS3-205ENST00000564814 A0A1B0GWB2 263 aa4.75□□□□□ -1.65
GINS3-205ENST00000564814 K7ERU9 68 aa4.75□□□□□ -1.65
GINS3-205ENST00000564814 EIF4EBP3O60516 100 aaPredicted RBP4.75□□□□□ -1.65
GINS3-205ENST00000564814 RPL18AQ02543 176 aaKnown RBP4.75□□□□□ -1.65
GINS3-205ENST00000564814 LRP1BQ9NZR2 4599 aa4.74□□□□□ -1.65
GINS3-205ENST00000564814 A0A0B4J2C4 111 aa4.74□□□□□ -1.65
GINS3-205ENST00000564814 K7ERJ3 54 aa4.74□□□□□ -1.65
GINS3-205ENST00000564814 KRTAP7-1Q8IUC3 87 aa4.74□□□□□ -1.65
GINS3-205ENST00000564814 MUSTN1Q8IVN3 82 aa4.74□□□□□ -1.65
GINS3-205ENST00000564814 DAND5Q8N907 189 aa4.74□□□□□ -1.65
GINS3-205ENST00000564814 SVIPQ8NHG7 77 aa4.74□□□□□ -1.65
GINS3-205ENST00000564814 HSPG2P98160 4391 aa4.74□□□□□ -1.65
GINS3-205ENST00000564814 IGKV2-28A0A075B6P5 120 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 A0A0U1RRA0 63 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 PANO1I0J062 215 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 IGKV2D-28P01615 120 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 KRTAP10-1P60331 282 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 GAGE2BQ13066 116 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 GAGE2EQ4V326 116 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 XP32Q5T750 250 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 NAA38Q9BRA0 125 aaKnown RBP4.73□□□□□ -1.65
GINS3-205ENST00000564814 XAGE1AQ9HD64 81 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 GAGE2DQ9UEU5 116 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.73□□□□□ -1.65
GINS3-205ENST00000564814 DNAH5Q8TE73 4624 aa4.73□□□□□ -1.65
GINS3-205ENST00000564814 TRAV13-2A0A0B4J235 113 aa4.72□□□□□ -1.65
GINS3-205ENST00000564814 A0A1W2PNN7 141 aa4.72□□□□□ -1.65
GINS3-205ENST00000564814 A4D1N5 150 aa4.72□□□□□ -1.65
GINS3-205ENST00000564814 M0R378 163 aa4.72□□□□□ -1.65
GINS3-205ENST00000564814 OCIAD2Q56VL3 154 aa4.72□□□□□ -1.65
GINS3-205ENST00000564814 Q8NDZ9 215 aa4.72□□□□□ -1.65
GINS3-205ENST00000564814 A0A087WYN8 130 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 IGKV2-24A0A0C4DH68 120 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 F8W1H4 67 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 J3QR89 54 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 IGLV6-57P01721 117 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 CHTF8P0CG12 524 aa4.71□□□□□ -1.66
GINS3-205ENST00000564814 CFC1BP0CG36 223 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms