RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 MP68P56378 58 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 BLCAPP62952 87 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 RBM3P98179 157 aaKnown RBP2.26□□□□□ -2.05
CDH1-207ENST00000564745 Q6ZS52 159 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 UBL5Q9BZL1 73 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 C14orf132Q9NPU4 83 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 USP24Q9UPU5 2620 aa2.26□□□□□ -2.05
CDH1-207ENST00000564745 DNAH14Q0VDD8 3507 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 TANC2Q9HCD6 1990 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 RIF1Q5UIP0 2472 aaKnown RBP2.25□□□□□ -2.05
CDH1-207ENST00000564745 F8WEM9 126 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 GNRH2O43555 120 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 MIFP14174 115 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 ESPL1Q14674 2120 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 CNEP1R1Q8N9A8 125 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 Q8NAQ8 132 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 ZNF625Q96I27 306 aaPredicted RBP2.25□□□□□ -2.05
CDH1-207ENST00000564745 LINC00474Q9P2X8 69 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 MYO9AB2RTY4 2548 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 ZFYVE26Q68DK2 2539 aa2.25□□□□□ -2.05
CDH1-207ENST00000564745 FAM186AA6NE01 2351 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 HEATR1Q9H583 2144 aaKnown RBP2.24□□□□□ -2.05
CDH1-207ENST00000564745 IGLV10-54A0A075B6I4 117 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 TRBV7-4A0A0J9YYF1 115 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 TMEM256-PLSCR3K7ERE1 68 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 CRPP02741 224 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 SNRPD3P62318 126 aaKnown RBP2.24□□□□□ -2.05
CDH1-207ENST00000564745 Q1T7F1 81 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 ESRGQ1W209 222 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 ENHOQ6UWT2 76 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 SOSTDC1Q6X4U4 206 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 DYNLRB2Q8TF09 96 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 ORMDL1Q9P0S3 153 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 HECTD1Q9ULT8 2610 aa2.24□□□□□ -2.05
CDH1-207ENST00000564745 RP1P56715 2156 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 SPTAN1Q13813 2472 aaKnown RBP2.23□□□□□ -2.05
CDH1-207ENST00000564745 IGKV2-29A2NJV5 120 aaPredicted RBP2.23□□□□□ -2.05
CDH1-207ENST00000564745 J3QKU1 62 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 NCR3O14931 201 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 PDE6GP18545 87 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 SS18Q15532 418 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 MINOS1Q5TGZ0 78 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 Q8N6K4 173 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 SMIM11BQ8TCY0 68 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 CDKN2A-AS1Q9UH64 79 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 XIRP2A4UGR9 3374 aa2.23□□□□□ -2.05
CDH1-207ENST00000564745 LOC110117498A0A087WWA1 95 aa2.22□□□□□ -2.05
CDH1-207ENST00000564745 A0A1B0GU33 70 aa2.22□□□□□ -2.05
CDH1-207ENST00000564745 LECT2O14960 151 aa2.22□□□□□ -2.05
CDH1-207ENST00000564745 TMEM254Q8TBM7 123 aa2.22□□□□□ -2.05
CDH1-207ENST00000564745 BPESC1Q9GZL8 116 aa2.22□□□□□ -2.05
CDH1-207ENST00000564745 LINC00588Q9Y4M8 146 aa2.22□□□□□ -2.05
CDH1-207ENST00000564745 SNURFQ9Y675 71 aa2.22□□□□□ -2.05
CDH1-207ENST00000564745 MED12Q93074 2177 aa2.22□□□□□ -2.05
CDH1-207ENST00000564745 HELZ2Q9BYK8 2649 aaKnown RBP2.21□□□□□ -2.05
CDH1-207ENST00000564745 CDH23Q9H251 3354 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 HTTP42858 3142 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 TRAV10A0A0B4J240 114 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 A0A1W2PNM2 257 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 ODF3BA8MYP8 253 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 E7EQL1 145 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 NDUFA4O00483 81 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 FUSP35637 526 aaKnown RBP eCLIP2.21□□□□□ -2.06
CDH1-207ENST00000564745 DAD1P61803 113 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 FAM229BQ4G0N7 80 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 FAM74A4Q5TZK3 123 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 SCXQ7RTU7 201 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 Q8N814 137 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 WFDC9Q8NEX5 89 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 DEFB104AQ8WTQ1 72 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 C11orf68Q9H3H3 251 aaKnown RBP2.21□□□□□ -2.06
CDH1-207ENST00000564745 MINOS1-NBL1R4GNA1 71 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 CREBBPQ92793 2442 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 KNTC1P50748 2209 aa2.21□□□□□ -2.06
CDH1-207ENST00000564745 SPTA1P02549 2419 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 HIVEP2P31629 2446 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 CEP250Q9BV73 2442 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 TNCP24821 2201 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 TRBV6-4A0A1B0GX49 114 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 hDV103S1A0JD37 113 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 NREPQ16612 68 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 Q6ZQT0 140 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 KTN1-AS1Q86SY8 53 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 LINC00467Q9BRT7 94 aa2.2□□□□□ -2.06
CDH1-207ENST00000564745 GVINP1Q7Z2Y8 2422 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 SPTBN2O15020 2390 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 C3orf84H3BNL1 204 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 PLXNB1O43157 2135 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 CCL18P55774 89 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 UBE2BP63146 152 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 HAMPP81172 84 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 COX6A2Q02221 97 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 KRTAP6-3Q3LI67 103 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 PHF5AQ7RTV0 110 aaKnown RBP2.19□□□□□ -2.06
CDH1-207ENST00000564745 KRTAP13-1Q8IUC0 172 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 SMG1Q96Q15 3661 aaKnown RBP2.19□□□□□ -2.06
CDH1-207ENST00000564745 WDFY4Q6ZS81 3184 aa2.19□□□□□ -2.06
CDH1-207ENST00000564745 DIDO1Q9BTC0 2240 aaKnown RBP2.18□□□□□ -2.06
CDH1-207ENST00000564745 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.18□□□□□ -2.06
CDH1-207ENST00000564745 LCE6AA0A183 80 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms