RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 CRPP02741 224 aa4.94□□□□□ -1.62
HERPUD1-209ENST00000564678 HTN3P15516 51 aa4.94□□□□□ -1.62
HERPUD1-209ENST00000564678 CCL18P55774 89 aa4.94□□□□□ -1.62
HERPUD1-209ENST00000564678 CKS1BP61024 79 aa4.94□□□□□ -1.62
HERPUD1-209ENST00000564678 KIAA0087Q14695 138 aa4.94□□□□□ -1.62
HERPUD1-209ENST00000564678 LYPD5Q6UWN5 251 aa4.94□□□□□ -1.62
HERPUD1-209ENST00000564678 TRACP01848 142 aa4.93□□□□□ -1.62
HERPUD1-209ENST00000564678 CLPSL2Q6UWE3 100 aa4.93□□□□□ -1.62
HERPUD1-209ENST00000564678 C2orf82Q6UX34 121 aa4.93□□□□□ -1.62
HERPUD1-209ENST00000564678 CLEC2BQ92478 149 aa4.93□□□□□ -1.62
HERPUD1-209ENST00000564678 KLK5Q9Y337 293 aaPredicted RBP4.93□□□□□ -1.62
HERPUD1-209ENST00000564678 IGKV2-28A0A075B6P5 120 aa4.92□□□□□ -1.62
HERPUD1-209ENST00000564678 TRAV8-4A0A0B4J246 113 aa4.92□□□□□ -1.62
HERPUD1-209ENST00000564678 IGKV2D-28P01615 120 aa4.92□□□□□ -1.62
HERPUD1-209ENST00000564678 PFN2P35080 140 aa4.92□□□□□ -1.62
HERPUD1-209ENST00000564678 LCE1DQ5T752 114 aa4.92□□□□□ -1.62
HERPUD1-209ENST00000564678 H0YGX0 51 aa4.92□□□□□ -1.62
HERPUD1-209ENST00000564678 SCGB1A1P11684 91 aa4.92□□□□□ -1.62
HERPUD1-209ENST00000564678 LINC00337Q8N6G1 96 aa4.92□□□□□ -1.62
HERPUD1-209ENST00000564678 NTN5Q8WTR8 489 aaPredicted RBP4.92□□□□□ -1.62
HERPUD1-209ENST00000564678 NDUFC2O95298 119 aa4.91□□□□□ -1.62
HERPUD1-209ENST00000564678 KPRPQ5T749 579 aaPredicted RBP4.91□□□□□ -1.62
HERPUD1-209ENST00000564678 IGLV10-54A0A075B6I4 117 aa4.91□□□□□ -1.62
HERPUD1-209ENST00000564678 UBE2WQ96B02 151 aa4.91□□□□□ -1.62
HERPUD1-209ENST00000564678 DEFB121Q5J5C9 76 aa4.9□□□□□ -1.62
HERPUD1-209ENST00000564678 ENHOQ6UWT2 76 aa4.9□□□□□ -1.62
HERPUD1-209ENST00000564678 Q8N3U1 123 aa4.9□□□□□ -1.62
HERPUD1-209ENST00000564678 KLK12Q9UKR0 248 aa4.9□□□□□ -1.62
HERPUD1-209ENST00000564678 A0A0J9YWU9 116 aa4.89□□□□□ -1.63
HERPUD1-209ENST00000564678 TEX49A0A1B0GTD5 131 aa4.89□□□□□ -1.63
HERPUD1-209ENST00000564678 SMIM11BQ8TCY0 68 aa4.89□□□□□ -1.63
HERPUD1-209ENST00000564678 C4orf26Q17RF5 130 aa4.89□□□□□ -1.63
HERPUD1-209ENST00000564678 C10orf25Q5T742 122 aa4.89□□□□□ -1.63
HERPUD1-209ENST00000564678 Q6ZTC4 211 aa4.89□□□□□ -1.63
HERPUD1-209ENST00000564678 IGLV5-37A0A075B6J1 123 aa4.88□□□□□ -1.63
HERPUD1-209ENST00000564678 GVQW2A0A096LPI5 108 aaPredicted RBP4.88□□□□□ -1.63
HERPUD1-209ENST00000564678 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
HERPUD1-209ENST00000564678 FAM240AA0A1B0GVK7 77 aa4.88□□□□□ -1.63
HERPUD1-209ENST00000564678 SPAG11BQ08648 103 aa4.88□□□□□ -1.63
HERPUD1-209ENST00000564678 OR13C6PQ8NH95 151 aa4.88□□□□□ -1.63
HERPUD1-209ENST00000564678 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
HERPUD1-209ENST00000564678 DEFB131BA0A096LNP1 70 aa4.87□□□□□ -1.63
HERPUD1-209ENST00000564678 A0A1B0GX51 115 aa4.87□□□□□ -1.63
HERPUD1-209ENST00000564678 BAALC-AS2P0C853 105 aa4.87□□□□□ -1.63
HERPUD1-209ENST00000564678 CD164Q04900 197 aa4.87□□□□□ -1.63
HERPUD1-209ENST00000564678 FBN1P35555 2871 aaKnown RBP4.86□□□□□ -1.63
HERPUD1-209ENST00000564678 DNAL4O96015 105 aa4.86□□□□□ -1.63
HERPUD1-209ENST00000564678 ESRGQ1W209 222 aa4.86□□□□□ -1.63
HERPUD1-209ENST00000564678 LINC01556Q5JQF7 62 aa4.86□□□□□ -1.63
HERPUD1-209ENST00000564678 UNQ6190/PRO20217Q6UXQ8 127 aa4.86□□□□□ -1.63
HERPUD1-209ENST00000564678 WFDC10BQ8IUB3 73 aa4.86□□□□□ -1.63
HERPUD1-209ENST00000564678 ANK2Q01484 3957 aa4.86□□□□□ -1.63
HERPUD1-209ENST00000564678 DNAH3Q8TD57 4116 aa4.86□□□□□ -1.63
HERPUD1-209ENST00000564678 ACYP1P07311 99 aa4.85□□□□□ -1.63
HERPUD1-209ENST00000564678 PRAC1Q96KF2 57 aa4.85□□□□□ -1.63
HERPUD1-209ENST00000564678 NANOS2P60321 138 aaKnown RBP4.85□□□□□ -1.63
HERPUD1-209ENST00000564678 C9orf116Q5BN46 136 aaPredicted RBP4.85□□□□□ -1.63
HERPUD1-209ENST00000564678 KRTAP26-1Q6PEX3 210 aa4.85□□□□□ -1.63
HERPUD1-209ENST00000564678 C15orf53Q8NAA6 179 aa4.85□□□□□ -1.63
HERPUD1-209ENST00000564678 SNCGO76070 127 aa4.84□□□□□ -1.63
HERPUD1-209ENST00000564678 INAFM2P0DMQ5 153 aa4.84□□□□□ -1.63
HERPUD1-209ENST00000564678 C6orf223Q8N319 242 aa4.84□□□□□ -1.63
HERPUD1-209ENST00000564678 TM2D3Q9BRN9 247 aa4.84□□□□□ -1.63
HERPUD1-209ENST00000564678 TRAV10A0A0B4J240 114 aa4.84□□□□□ -1.64
HERPUD1-209ENST00000564678 A0A087WYN8 130 aa4.83□□□□□ -1.64
HERPUD1-209ENST00000564678 MT-ATP8P03928 68 aa4.83□□□□□ -1.64
HERPUD1-209ENST00000564678 C22orf24Q9Y442 160 aa4.83□□□□□ -1.64
HERPUD1-209ENST00000564678 DNAH10OSP0CZ25 163 aa4.82□□□□□ -1.64
HERPUD1-209ENST00000564678 S100A7L2Q5SY68 101 aa4.82□□□□□ -1.64
HERPUD1-209ENST00000564678 LINC00167Q96N53 147 aa4.82□□□□□ -1.64
HERPUD1-209ENST00000564678 C6orf48Q9UBA6 75 aa4.82□□□□□ -1.64
HERPUD1-209ENST00000564678 STAB1Q9NY15 2570 aa4.82□□□□□ -1.64
HERPUD1-209ENST00000564678 LECT2O14960 151 aa4.82□□□□□ -1.64
HERPUD1-209ENST00000564678 PRR3P79522 188 aaKnown RBP4.82□□□□□ -1.64
HERPUD1-209ENST00000564678 REG3GQ6UW15 175 aa4.82□□□□□ -1.64
HERPUD1-209ENST00000564678 CAMK2N2Q96S95 79 aa4.82□□□□□ -1.64
HERPUD1-209ENST00000564678 Q6Q795 121 aa4.81□□□□□ -1.64
HERPUD1-209ENST00000564678 LINC00526Q96FQ7 95 aa4.81□□□□□ -1.64
HERPUD1-209ENST00000564678 ORMDL1Q9P0S3 153 aa4.81□□□□□ -1.64
HERPUD1-209ENST00000564678 IGLV6-57P01721 117 aa4.81□□□□□ -1.64
HERPUD1-209ENST00000564678 Q8N814 137 aa4.81□□□□□ -1.64
HERPUD1-209ENST00000564678 OBSCN-AS1Q96MR7 158 aa4.81□□□□□ -1.64
HERPUD1-209ENST00000564678 K7EIL1 84 aa4.8□□□□□ -1.64
HERPUD1-209ENST00000564678 TMEM256-PLSCR3K7ERE1 68 aa4.8□□□□□ -1.64
HERPUD1-209ENST00000564678 RPL18AQ02543 176 aaKnown RBP4.8□□□□□ -1.64
HERPUD1-209ENST00000564678 C15orf56Q8N910 161 aa4.8□□□□□ -1.64
HERPUD1-209ENST00000564678 H3BQ85 93 aa4.8□□□□□ -1.64
HERPUD1-209ENST00000564678 NCR3O14931 201 aa4.8□□□□□ -1.64
HERPUD1-209ENST00000564678 KRTAP21-3Q3LHN1 58 aa4.8□□□□□ -1.64
HERPUD1-209ENST00000564678 C6orf99Q4VX62 202 aa4.8□□□□□ -1.64
HERPUD1-209ENST00000564678 Q8NDZ9 215 aa4.8□□□□□ -1.64
HERPUD1-209ENST00000564678 PKD1L1Q8TDX9 2849 aa4.79□□□□□ -1.64
HERPUD1-209ENST00000564678 IGKV2D-24A0A075B6R9 120 aa4.79□□□□□ -1.64
HERPUD1-209ENST00000564678 NDUFC2-KCTD14E9PQ53 114 aa4.79□□□□□ -1.64
HERPUD1-209ENST00000564678 LINC00575Q6W349 94 aa4.79□□□□□ -1.64
HERPUD1-209ENST00000564678 SDIM1Q6ZPB5 146 aa4.79□□□□□ -1.64
HERPUD1-209ENST00000564678 JMJD7-PLA2G4BH0Y9G9 81 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 HIGD2BQ4VC39 106 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 Q6ZRU5 148 aa4.78□□□□□ -1.64
HERPUD1-209ENST00000564678 MRPL55Q7Z7F7 128 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms