RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 ZNF625Q96I27 306 aaPredicted RBP6.13□□□□□ -1.43
CDH1-206ENST00000564676 HIST1H2BNQ99877 126 aa6.13□□□□□ -1.43
CDH1-206ENST00000564676 HIST1H2BMQ99879 126 aa6.13□□□□□ -1.43
CDH1-206ENST00000564676 C22orf24Q9Y442 160 aa6.13□□□□□ -1.43
CDH1-206ENST00000564676 HERC1Q15751 4861 aa6.13□□□□□ -1.43
CDH1-206ENST00000564676 SRSF9Q13242 221 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDH1-206ENST00000564676 KRTAP11-1Q8IUC1 163 aa6.12□□□□□ -1.43
CDH1-206ENST00000564676 ERG28Q9UKR5 140 aa6.12□□□□□ -1.43
CDH1-206ENST00000564676 MAP1LC3CQ9BXW4 147 aa6.11□□□□□ -1.43
CDH1-206ENST00000564676 DPM2O94777 84 aa6.1□□□□□ -1.43
CDH1-206ENST00000564676 IGLV7-43P04211 117 aa6.1□□□□□ -1.43
CDH1-206ENST00000564676 PLNP26678 52 aa6.1□□□□□ -1.43
CDH1-206ENST00000564676 LINC00158P58513 81 aa6.1□□□□□ -1.43
CDH1-206ENST00000564676 COX17Q14061 63 aa6.1□□□□□ -1.43
CDH1-206ENST00000564676 REG3GQ6UW15 175 aa6.1□□□□□ -1.43
CDH1-206ENST00000564676 MRPL55Q7Z7F7 128 aaKnown RBP6.1□□□□□ -1.43
CDH1-206ENST00000564676 PMCHL2Q9BQD1 86 aa6.1□□□□□ -1.43
CDH1-206ENST00000564676 TP73-AS1Q9UF72 201 aa6.1□□□□□ -1.43
CDH1-206ENST00000564676 PLA2G2DQ9UNK4 145 aa6.1□□□□□ -1.43
CDH1-206ENST00000564676 ATP6V1G1O75348 118 aa6.09□□□□□ -1.43
CDH1-206ENST00000564676 HERVK_113P61574 105 aa6.09□□□□□ -1.43
CDH1-206ENST00000564676 NKAPP1Q8N9T2 125 aa6.09□□□□□ -1.43
CDH1-206ENST00000564676 SND1-IT1Q9HBX3 110 aa6.09□□□□□ -1.43
CDH1-206ENST00000564676 A0A0U1RRA0 63 aa6.08□□□□□ -1.44
CDH1-206ENST00000564676 TMEM238LA0A1B0GVL6 79 aa6.08□□□□□ -1.44
CDH1-206ENST00000564676 GAGE10A6NGK3 116 aa6.08□□□□□ -1.44
CDH1-206ENST00000564676 IGKCP01834 107 aa6.08□□□□□ -1.44
CDH1-206ENST00000564676 S100A1P23297 94 aa6.08□□□□□ -1.44
CDH1-206ENST00000564676 MEIG1Q5JSS6 88 aa6.08□□□□□ -1.44
CDH1-206ENST00000564676 PLEKHB2Q96CS7 222 aa6.08□□□□□ -1.44
CDH1-206ENST00000564676 LINC00167Q96N53 147 aa6.08□□□□□ -1.44
CDH1-206ENST00000564676 NDUFA12Q9UI09 145 aa6.08□□□□□ -1.44
CDH1-206ENST00000564676 MYMXA0A1B0GTQ4 84 aa6.07□□□□□ -1.44
CDH1-206ENST00000564676 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
CDH1-206ENST00000564676 LEPROTO15243 131 aa6.07□□□□□ -1.44
CDH1-206ENST00000564676 HERV-K104P63124 156 aa6.07□□□□□ -1.44
CDH1-206ENST00000564676 RPL24P83731 157 aaKnown RBP6.07□□□□□ -1.44
CDH1-206ENST00000564676 DIRC1Q969H9 104 aa6.07□□□□□ -1.44
CDH1-206ENST00000564676 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
CDH1-206ENST00000564676 IGLV5-37A0A075B6J1 123 aa6.06□□□□□ -1.44
CDH1-206ENST00000564676 LINC00587B1AMM8 73 aa6.06□□□□□ -1.44
CDH1-206ENST00000564676 SYS1-DBNDD2H3BUS1 97 aa6.06□□□□□ -1.44
CDH1-206ENST00000564676 SMIM13P0DJ93 91 aa6.06□□□□□ -1.44
CDH1-206ENST00000564676 MT1HL1P0DM35 61 aa6.06□□□□□ -1.44
CDH1-206ENST00000564676 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
CDH1-206ENST00000564676 J3QQQ9 107 aa6.05□□□□□ -1.44
CDH1-206ENST00000564676 LGALS3P17931 250 aaKnown RBP6.05□□□□□ -1.44
CDH1-206ENST00000564676 COA6Q5JTJ3 125 aaKnown RBP6.05□□□□□ -1.44
CDH1-206ENST00000564676 H0Y9J4 135 aa6.04□□□□□ -1.44
CDH1-206ENST00000564676 ZNF861PO60384 105 aa6.04□□□□□ -1.44
CDH1-206ENST00000564676 BCE1O60756 84 aa6.04□□□□□ -1.44
CDH1-206ENST00000564676 VPREB1P12018 145 aa6.04□□□□□ -1.44
CDH1-206ENST00000564676 TSPEAR-AS2P59090 65 aa6.04□□□□□ -1.44
CDH1-206ENST00000564676 PET117Q6UWS5 81 aa6.04□□□□□ -1.44
CDH1-206ENST00000564676 MIR7-3HGQ8N6C7 128 aa6.04□□□□□ -1.44
CDH1-206ENST00000564676 NMUP48645 174 aa6.03□□□□□ -1.44
CDH1-206ENST00000564676 KRTDAPP60985 99 aa6.03□□□□□ -1.44
CDH1-206ENST00000564676 TNXBP22105 4242 aa6.02□□□□□ -1.45
CDH1-206ENST00000564676 IGKV2-28A0A075B6P5 120 aa6.02□□□□□ -1.45
CDH1-206ENST00000564676 IGKV2D-28P01615 120 aa6.02□□□□□ -1.45
CDH1-206ENST00000564676 C3orf79P0CE67 100 aa6.02□□□□□ -1.45
CDH1-206ENST00000564676 RPL28P46779 137 aaKnown RBP6.02□□□□□ -1.45
CDH1-206ENST00000564676 LINC01545Q5VT33 79 aa6.02□□□□□ -1.45
CDH1-206ENST00000564676 BOD1L2Q8IYS8 172 aa6.02□□□□□ -1.45
CDH1-206ENST00000564676 IGLV1-50A0A075B6I6 118 aa6.01□□□□□ -1.45
CDH1-206ENST00000564676 E9PLD3 99 aa6.01□□□□□ -1.45
CDH1-206ENST00000564676 UBE2AP49459 152 aa6.01□□□□□ -1.45
CDH1-206ENST00000564676 KRTAP10-8P60410 259 aa6.01□□□□□ -1.45
CDH1-206ENST00000564676 Q8NDZ9 215 aa6.01□□□□□ -1.45
CDH1-206ENST00000564676 C20orf202A1L168 122 aa6□□□□□ -1.45
CDH1-206ENST00000564676 M0R378 163 aa6□□□□□ -1.45
CDH1-206ENST00000564676 DAND5Q8N907 189 aa6□□□□□ -1.45
CDH1-206ENST00000564676 TMEM238C9JI98 176 aa5.99□□□□□ -1.45
CDH1-206ENST00000564676 KRTAP19-4Q3LI73 84 aa5.99□□□□□ -1.45
CDH1-206ENST00000564676 PRR26Q8N8Z3 221 aa5.99□□□□□ -1.45
CDH1-206ENST00000564676 A0A0J9YXY3 114 aa5.98□□□□□ -1.45
CDH1-206ENST00000564676 NCR3O14931 201 aa5.98□□□□□ -1.45
CDH1-206ENST00000564676 FAM19A1Q7Z5A9 133 aa5.98□□□□□ -1.45
CDH1-206ENST00000564676 MIEN1Q9BRT3 115 aa5.98□□□□□ -1.45
CDH1-206ENST00000564676 TMEM126AQ9H061 195 aa5.98□□□□□ -1.45
CDH1-206ENST00000564676 IGKV2D-26A0A0A0MRZ7 120 aa5.97□□□□□ -1.45
CDH1-206ENST00000564676 KRTAP1-4P0C5Y4 121 aa5.97□□□□□ -1.45
CDH1-206ENST00000564676 S100A2P29034 98 aa5.97□□□□□ -1.45
CDH1-206ENST00000564676 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
CDH1-206ENST00000564676 LOC107984156A0A0G2JMH3 177 aa5.96□□□□□ -1.46
CDH1-206ENST00000564676 ZNF815PA8K554 130 aa5.96□□□□□ -1.46
CDH1-206ENST00000564676 S100A6P06703 90 aa5.96□□□□□ -1.46
CDH1-206ENST00000564676 PRLHP81277 87 aa5.96□□□□□ -1.46
CDH1-206ENST00000564676 ARL17AQ8IVW1 177 aa5.96□□□□□ -1.46
CDH1-206ENST00000564676 AKR1D1P51857 326 aa5.95□□□□□ -1.46
CDH1-206ENST00000564676 NPC2P61916 151 aa5.95□□□□□ -1.46
CDH1-206ENST00000564676 S100A12P80511 92 aa5.95□□□□□ -1.46
CDH1-206ENST00000564676 ADAMTSL4-AS1Q5T5F5 129 aa5.95□□□□□ -1.46
CDH1-206ENST00000564676 KRTAP13-1Q8IUC0 172 aa5.95□□□□□ -1.46
CDH1-206ENST00000564676 ATOH7Q8N100 152 aa5.95□□□□□ -1.46
CDH1-206ENST00000564676 HIST3H2BBQ8N257 126 aa5.95□□□□□ -1.46
CDH1-206ENST00000564676 HMCN2Q8NDA2 5059 aa5.95□□□□□ -1.46
CDH1-206ENST00000564676 TRBV10-3A0A0K0K1G6 114 aa5.94□□□□□ -1.46
CDH1-206ENST00000564676 PRYO14603 147 aa5.94□□□□□ -1.46
CDH1-206ENST00000564676 RPL13AP40429 203 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms