RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 C3orf79P0CE67 100 aa10.6□□□□□ -0.71
USB1-209ENST00000564387 C1orf137Q5JT78 98 aa10.6□□□□□ -0.71
USB1-209ENST00000564387 J3QQQ9 107 aa10.59□□□□□ -0.71
USB1-209ENST00000564387 HERVK_113P61574 105 aa10.59□□□□□ -0.71
USB1-209ENST00000564387 MYMXA0A1B0GTQ4 84 aa10.58□□□□□ -0.72
USB1-209ENST00000564387 LINC00587B1AMM8 73 aa10.58□□□□□ -0.72
USB1-209ENST00000564387 IGLV7-43P04211 117 aa10.58□□□□□ -0.72
USB1-209ENST00000564387 VPREB1P12018 145 aa10.58□□□□□ -0.72
USB1-209ENST00000564387 UBE2BP63146 152 aa10.58□□□□□ -0.72
USB1-209ENST00000564387 E9PLD3 99 aa10.57□□□□□ -0.72
USB1-209ENST00000564387 NMUP48645 174 aa10.57□□□□□ -0.72
USB1-209ENST00000564387 LINC00167Q96N53 147 aa10.57□□□□□ -0.72
USB1-209ENST00000564387 J3QL48 77 aa10.56□□□□□ -0.72
USB1-209ENST00000564387 LINC00158P58513 81 aa10.56□□□□□ -0.72
USB1-209ENST00000564387 Q8NDZ9 215 aa10.56□□□□□ -0.72
USB1-209ENST00000564387 SMIM13P0DJ93 91 aa10.55□□□□□ -0.72
USB1-209ENST00000564387 MT1HL1P0DM35 61 aa10.55□□□□□ -0.72
USB1-209ENST00000564387 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
USB1-209ENST00000564387 RPL24P83731 157 aaKnown RBP10.53□□□□□ -0.72
USB1-209ENST00000564387 NKAPP1Q8N9T2 125 aa10.53□□□□□ -0.72
USB1-209ENST00000564387 LOC107984156A0A0G2JMH3 177 aa10.52□□□□□ -0.73
USB1-209ENST00000564387 A0A0U1RRA0 63 aa10.52□□□□□ -0.73
USB1-209ENST00000564387 LGALS3P17931 250 aaKnown RBP10.52□□□□□ -0.73
USB1-209ENST00000564387 KRTDAPP60985 99 aa10.52□□□□□ -0.73
USB1-209ENST00000564387 MEIG1Q5JSS6 88 aa10.52□□□□□ -0.73
USB1-209ENST00000564387 ARL17AQ8IVW1 177 aa10.52□□□□□ -0.73
USB1-209ENST00000564387 HIST3H2BBQ8N257 126 aa10.52□□□□□ -0.73
USB1-209ENST00000564387 MIR7-3HGQ8N6C7 128 aa10.52□□□□□ -0.73
USB1-209ENST00000564387 REG3GQ6UW15 175 aa10.51□□□□□ -0.73
USB1-209ENST00000564387 IGLV1-50A0A075B6I6 118 aa10.5□□□□□ -0.73
USB1-209ENST00000564387 RPL37AP8A6NKH3 93 aa10.5□□□□□ -0.73
USB1-209ENST00000564387 DIRC1Q969H9 104 aa10.5□□□□□ -0.73
USB1-209ENST00000564387 GAGE10A6NGK3 116 aa10.49□□□□□ -0.73
USB1-209ENST00000564387 HIST1H2BLQ99880 126 aa10.49□□□□□ -0.73
USB1-209ENST00000564387 H0Y9J4 135 aa10.48□□□□□ -0.73
USB1-209ENST00000564387 ZNF861PO60384 105 aa10.48□□□□□ -0.73
USB1-209ENST00000564387 BCE1O60756 84 aa10.48□□□□□ -0.73
USB1-209ENST00000564387 IGKV2D-26A0A0A0MRZ7 120 aa10.47□□□□□ -0.73
USB1-209ENST00000564387 A0A0J9YXY3 114 aa10.47□□□□□ -0.73
USB1-209ENST00000564387 C20orf202A1L168 122 aa10.47□□□□□ -0.73
USB1-209ENST00000564387 AKR1D1P51857 326 aa10.47□□□□□ -0.73
USB1-209ENST00000564387 KRTAP10-8P60410 259 aa10.46□□□□□ -0.73
USB1-209ENST00000564387 KRTAP13-1Q8IUC0 172 aa10.46□□□□□ -0.73
USB1-209ENST00000564387 M0R378 163 aa10.45□□□□□ -0.74
USB1-209ENST00000564387 BOD1L2Q8IYS8 172 aa10.45□□□□□ -0.74
USB1-209ENST00000564387 TNXBP22105 4242 aa10.44□□□□□ -0.74
USB1-209ENST00000564387 IGKV2-28A0A075B6P5 120 aa10.44□□□□□ -0.74
USB1-209ENST00000564387 IGKV2D-28P01615 120 aa10.44□□□□□ -0.74
USB1-209ENST00000564387 S100A6P06703 90 aa10.44□□□□□ -0.74
USB1-209ENST00000564387 ADAMTSL4-AS1Q5T5F5 129 aa10.44□□□□□ -0.74
USB1-209ENST00000564387 DAND5Q8N907 189 aa10.44□□□□□ -0.74
USB1-209ENST00000564387 LITAFQ99732 161 aa10.44□□□□□ -0.74
USB1-209ENST00000564387 TIMM17BO60830 172 aa10.43□□□□□ -0.74
USB1-209ENST00000564387 KRTAP1-4P0C5Y4 121 aa10.43□□□□□ -0.74
USB1-209ENST00000564387 S100A2P29034 98 aa10.43□□□□□ -0.74
USB1-209ENST00000564387 C5orf52A6NGY3 159 aa10.42□□□□□ -0.74
USB1-209ENST00000564387 RPL28P46779 137 aaKnown RBP10.42□□□□□ -0.74
USB1-209ENST00000564387 TMEM126AQ9H061 195 aa10.42□□□□□ -0.74
USB1-209ENST00000564387 SNRPEP62304 92 aaKnown RBP10.41□□□□□ -0.74
USB1-209ENST00000564387 ANKRD39Q53RE8 183 aa10.41□□□□□ -0.74
USB1-209ENST00000564387 TRBV10-2A0A0K0K1G8 114 aa10.4□□□□□ -0.74
USB1-209ENST00000564387 TMEM238C9JI98 176 aa10.4□□□□□ -0.74
USB1-209ENST00000564387 NDUFC2O95298 119 aa10.4□□□□□ -0.74
USB1-209ENST00000564387 SOSTDC1Q6X4U4 206 aa10.4□□□□□ -0.74
USB1-209ENST00000564387 TTTY13Q9BZ97 58 aa10.4□□□□□ -0.74
USB1-209ENST00000564387 ZNF815PA8K554 130 aa10.39□□□□□ -0.75
USB1-209ENST00000564387 EIF4EBP3O60516 100 aaPredicted RBP10.39□□□□□ -0.75
USB1-209ENST00000564387 ATOH7Q8N100 152 aa10.39□□□□□ -0.75
USB1-209ENST00000564387 KCNQ1DNQ9H478 68 aa10.38□□□□□ -0.75
USB1-209ENST00000564387 NCR3O14931 201 aa10.37□□□□□ -0.75
USB1-209ENST00000564387 SPRR1AP35321 89 aa10.37□□□□□ -0.75
USB1-209ENST00000564387 PRYO14603 147 aa10.36□□□□□ -0.75
USB1-209ENST00000564387 MIEN1Q9BRT3 115 aa10.36□□□□□ -0.75
USB1-209ENST00000564387 SPANXB1Q9NS25 103 aaPredicted RBP10.36□□□□□ -0.75
USB1-209ENST00000564387 KRTAP4-16G5E9R7 235 aaPredicted RBP10.35□□□□□ -0.75
USB1-209ENST00000564387 UBE2AP49459 152 aa10.35□□□□□ -0.75
USB1-209ENST00000564387 TRBV10-3A0A0K0K1G6 114 aa10.34□□□□□ -0.75
USB1-209ENST00000564387 LINC00308Q8TCZ7 52 aa10.34□□□□□ -0.75
USB1-209ENST00000564387 FAM19A1Q7Z5A9 133 aa10.33□□□□□ -0.76
USB1-209ENST00000564387 PCP2Q8IVA1 136 aa10.33□□□□□ -0.76
USB1-209ENST00000564387 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
USB1-209ENST00000564387 PRR26Q8N8Z3 221 aa10.33□□□□□ -0.76
USB1-209ENST00000564387 PPDPFQ9H3Y8 114 aa10.33□□□□□ -0.76
USB1-209ENST00000564387 IGLV6-57P01721 117 aa10.32□□□□□ -0.76
USB1-209ENST00000564387 PRLHP81277 87 aa10.32□□□□□ -0.76
USB1-209ENST00000564387 SPANXDQ9BXN6 97 aa10.32□□□□□ -0.76
USB1-209ENST00000564387 SPANXCQ9NY87 97 aa10.32□□□□□ -0.76
USB1-209ENST00000564387 HMCN2Q8NDA2 5059 aa10.3□□□□□ -0.76
USB1-209ENST00000564387 DDTP30046 118 aa10.3□□□□□ -0.76
USB1-209ENST00000564387 NPC2P61916 151 aa10.3□□□□□ -0.76
USB1-209ENST00000564387 SCGB1D4Q6XE38 83 aa10.29□□□□□ -0.76
USB1-209ENST00000564387 Q6ZVH6 145 aa10.29□□□□□ -0.76
USB1-209ENST00000564387 RPL13AP40429 203 aaKnown RBP10.28□□□□□ -0.76
USB1-209ENST00000564387 HSBP1L1C9JCN9 74 aa10.26□□□□□ -0.77
USB1-209ENST00000564387 IFITM1P13164 125 aa10.26□□□□□ -0.77
USB1-209ENST00000564387 S100A12P80511 92 aa10.26□□□□□ -0.77
USB1-209ENST00000564387 A0A087X002 238 aa10.25□□□□□ -0.77
USB1-209ENST00000564387 B5MCH6 92 aa10.25□□□□□ -0.77
USB1-209ENST00000564387 SCGB1D1O95968 90 aa10.25□□□□□ -0.77
USB1-209ENST00000564387 FAM229BQ4G0N7 80 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms