RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 PLNP26678 52 aa18.45■□□□□ 0.54
CMTM4-204ENST00000563952 MEIG1Q5JSS6 88 aa18.45■□□□□ 0.54
CMTM4-204ENST00000563952 Q8NDZ9 215 aa18.45■□□□□ 0.54
CMTM4-204ENST00000563952 IGLV1-50A0A075B6I6 118 aa18.44■□□□□ 0.54
CMTM4-204ENST00000563952 SMIM13P0DJ93 91 aa18.44■□□□□ 0.54
CMTM4-204ENST00000563952 PMCHL2Q9BQD1 86 aa18.44■□□□□ 0.54
CMTM4-204ENST00000563952 ATP6V1G1O75348 118 aa18.43■□□□□ 0.54
CMTM4-204ENST00000563952 NDUFA12Q9UI09 145 aa18.43■□□□□ 0.54
CMTM4-204ENST00000563952 HERV-K104P63124 156 aa18.42■□□□□ 0.54
CMTM4-204ENST00000563952 DPM2O94777 84 aa18.41■□□□□ 0.54
CMTM4-204ENST00000563952 UBE2AP49459 152 aa18.41■□□□□ 0.54
CMTM4-204ENST00000563952 HIST1H2BKO60814 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST1H2BJP06899 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST1H2BOP23527 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST1H2BBP33778 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST1H2BDP58876 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST1H2BCP62807 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST2H2BEQ16778 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST1H2BHQ93079 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST1H2BNQ99877 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 HIST1H2BMQ99879 126 aa18.4■□□□□ 0.54
CMTM4-204ENST00000563952 MYMXA0A1B0GTQ4 84 aa18.39■□□□□ 0.53
CMTM4-204ENST00000563952 MAP1LC3CQ9BXW4 147 aa18.39■□□□□ 0.53
CMTM4-204ENST00000563952 LEPROTO15243 131 aa18.38■□□□□ 0.53
CMTM4-204ENST00000563952 TSPEAR-AS2P59090 65 aa18.38■□□□□ 0.53
CMTM4-204ENST00000563952 IGKCP01834 107 aa18.37■□□□□ 0.53
CMTM4-204ENST00000563952 PLEKHB2Q96CS7 222 aa18.37■□□□□ 0.53
CMTM4-204ENST00000563952 TMEM238C9JI98 176 aa18.36■□□□□ 0.53
CMTM4-204ENST00000563952 HERVK_113P61574 105 aa18.36■□□□□ 0.53
CMTM4-204ENST00000563952 MIR7-3HGQ8N6C7 128 aa18.36■□□□□ 0.53
CMTM4-204ENST00000563952 RPL13AP40429 203 aaKnown RBP18.35■□□□□ 0.53
CMTM4-204ENST00000563952 LINC00587B1AMM8 73 aa18.34■□□□□ 0.53
CMTM4-204ENST00000563952 KRTAP13-1Q8IUC0 172 aa18.34■□□□□ 0.53
CMTM4-204ENST00000563952 TMEM126AQ9H061 195 aa18.34■□□□□ 0.53
CMTM4-204ENST00000563952 BOD1L2Q8IYS8 172 aa18.33■□□□□ 0.52
CMTM4-204ENST00000563952 J3QQQ9 107 aa18.32■□□□□ 0.52
CMTM4-204ENST00000563952 FAM19A1Q7Z5A9 133 aa18.32■□□□□ 0.52
CMTM4-204ENST00000563952 PRLHP81277 87 aa18.31■□□□□ 0.52
CMTM4-204ENST00000563952 M0R378 163 aa18.3■□□□□ 0.52
CMTM4-204ENST00000563952 LGALS3P17931 250 aaKnown RBP18.29■□□□□ 0.52
CMTM4-204ENST00000563952 NCR3O14931 201 aa18.27■□□□□ 0.52
CMTM4-204ENST00000563952 SYS1-DBNDD2H3BUS1 97 aa18.26■□□□□ 0.51
CMTM4-204ENST00000563952 DAND5Q8N907 189 aa18.25■□□□□ 0.51
CMTM4-204ENST00000563952 NMUP48645 174 aa18.24■□□□□ 0.51
CMTM4-204ENST00000563952 ANAPC11Q9NYG5 84 aa18.24■□□□□ 0.51
CMTM4-204ENST00000563952 A0A087X002 238 aa18.23■□□□□ 0.51
CMTM4-204ENST00000563952 CRYGAP11844 174 aa18.22■□□□□ 0.51
CMTM4-204ENST00000563952 IGKV2D-26A0A0A0MRZ7 120 aa18.18■□□□□ 0.5
CMTM4-204ENST00000563952 E9PLD3 99 aa18.18■□□□□ 0.5
CMTM4-204ENST00000563952 LINC01545Q5VT33 79 aa18.16■□□□□ 0.5
CMTM4-204ENST00000563952 TYMSOSQ8TAI1 123 aa18.16■□□□□ 0.5
CMTM4-204ENST00000563952 PRYO14603 147 aa18.15■□□□□ 0.5
CMTM4-204ENST00000563952 PET117Q6UWS5 81 aa18.15■□□□□ 0.5
CMTM4-204ENST00000563952 HIGD2AQ9BW72 106 aa18.15■□□□□ 0.5
CMTM4-204ENST00000563952 MIEN1Q9BRT3 115 aa18.14■□□□□ 0.49
CMTM4-204ENST00000563952 LOC107984156A0A0G2JMH3 177 aa18.13■□□□□ 0.49
CMTM4-204ENST00000563952 TRBV10-3A0A0K0K1G6 114 aa18.13■□□□□ 0.49
CMTM4-204ENST00000563952 ARL17AQ8IVW1 177 aa18.13■□□□□ 0.49
CMTM4-204ENST00000563952 LRP2P98164 4655 aa18.13■□□□□ 0.49
CMTM4-204ENST00000563952 COA6Q5JTJ3 125 aaKnown RBP18.12■□□□□ 0.49
CMTM4-204ENST00000563952 A0A0J9YXY3 114 aa18.11■□□□□ 0.49
CMTM4-204ENST00000563952 C3orf79P0CE67 100 aa18.11■□□□□ 0.49
CMTM4-204ENST00000563952 FAM229BQ4G0N7 80 aa18.11■□□□□ 0.49
CMTM4-204ENST00000563952 KCNQ1DNQ9H478 68 aa18.11■□□□□ 0.49
CMTM4-204ENST00000563952 KRTAP13-2Q52LG2 175 aa18.1■□□□□ 0.49
CMTM4-204ENST00000563952 KRTDAPP60985 99 aa18.09■□□□□ 0.49
CMTM4-204ENST00000563952 TSPAN13O95857 204 aa18.08■□□□□ 0.48
CMTM4-204ENST00000563952 NPC2P61916 151 aa18.08■□□□□ 0.48
CMTM4-204ENST00000563952 ADAMTSL4-AS1Q5T5F5 129 aa18.07■□□□□ 0.48
CMTM4-204ENST00000563952 ETDCA0A1B0GVM5 59 aa18.06■□□□□ 0.48
CMTM4-204ENST00000563952 SPRR1AP35321 89 aa18.06■□□□□ 0.48
CMTM4-204ENST00000563952 S100A12P80511 92 aa18.06■□□□□ 0.48
CMTM4-204ENST00000563952 LINC00337Q8N6G1 96 aa18.06■□□□□ 0.48
CMTM4-204ENST00000563952 TRBV10-2A0A0K0K1G8 114 aa18.05■□□□□ 0.48
CMTM4-204ENST00000563952 DDTP30046 118 aa18.05■□□□□ 0.48
CMTM4-204ENST00000563952 SPANXB1Q9NS25 103 aaPredicted RBP18.05■□□□□ 0.48
CMTM4-204ENST00000563952 SOSTDC1Q6X4U4 206 aa18.03■□□□□ 0.48
CMTM4-204ENST00000563952 KRTAP4-16G5E9R7 235 aaPredicted RBP18.01■□□□□ 0.47
CMTM4-204ENST00000563952 EIF4EBP3O60516 100 aaPredicted RBP18.01■□□□□ 0.47
CMTM4-204ENST00000563952 NDUFC2O95298 119 aa18.01■□□□□ 0.47
CMTM4-204ENST00000563952 PRR4Q16378 134 aa18■□□□□ 0.47
CMTM4-204ENST00000563952 S100A7L2Q5SY68 101 aa18■□□□□ 0.47
CMTM4-204ENST00000563952 ZNF815PA8K554 130 aa17.99■□□□□ 0.47
CMTM4-204ENST00000563952 SPRR4Q96PI1 79 aa17.99■□□□□ 0.47
CMTM4-204ENST00000563952 TTTY13Q9BZ97 58 aa17.98■□□□□ 0.47
CMTM4-204ENST00000563952 C20orf202A1L168 122 aa17.97■□□□□ 0.47
CMTM4-204ENST00000563952 SMCR5Q8TEV8 140 aa17.97■□□□□ 0.47
CMTM4-204ENST00000563952 ZNF706Q9Y5V0 76 aaPredicted RBP17.97■□□□□ 0.47
CMTM4-204ENST00000563952 LITAFQ99732 161 aa17.96■□□□□ 0.47
CMTM4-204ENST00000563952 LINC00304Q8N9R0 145 aa17.95■□□□□ 0.46
CMTM4-204ENST00000563952 B5MCH6 92 aa17.94■□□□□ 0.46
CMTM4-204ENST00000563952 TIMM17BO60830 172 aa17.94■□□□□ 0.46
CMTM4-204ENST00000563952 S100A1P23297 94 aa17.94■□□□□ 0.46
CMTM4-204ENST00000563952 C3orf22Q8N5N4 141 aa17.94■□□□□ 0.46
CMTM4-204ENST00000563952 IGLV6-57P01721 117 aa17.93■□□□□ 0.46
CMTM4-204ENST00000563952 LINC00308Q8TCZ7 52 aa17.93■□□□□ 0.46
CMTM4-204ENST00000563952 ATOH7Q8N100 152 aa17.91■□□□□ 0.46
CMTM4-204ENST00000563952 TRAV23DV6A0A075B6W5 121 aa17.89■□□□□ 0.45
CMTM4-204ENST00000563952 PPDPFQ9H3Y8 114 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms