RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 FAM19A5Q7Z5A7 132 aaPredicted RBP3.61□□□□□ -1.83
CDH13-206ENST00000562601 Q8IZM0 81 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 COX7B2Q8TF08 81 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 CHCHD1Q96BP2 118 aaKnown RBP3.61□□□□□ -1.83
CDH13-206ENST00000562601 PKIGQ9Y2B9 76 aa3.61□□□□□ -1.83
CDH13-206ENST00000562601 DMBT1Q9UGM3 2413 aaPredicted RBP3.6□□□□□ -1.83
CDH13-206ENST00000562601 C11orf86A6NJI1 115 aa3.6□□□□□ -1.83
CDH13-206ENST00000562601 H3BRM9 83 aa3.6□□□□□ -1.83
CDH13-206ENST00000562601 HSBP1O75506 76 aa3.6□□□□□ -1.83
CDH13-206ENST00000562601 TLX1NBP0CAT3 122 aa3.6□□□□□ -1.83
CDH13-206ENST00000562601 ZNF22P17026 224 aaPredicted RBP3.6□□□□□ -1.83
CDH13-206ENST00000562601 C9orf129Q5T035 196 aaKnown RBP3.6□□□□□ -1.83
CDH13-206ENST00000562601 TMEM170BQ5T4T1 132 aa3.6□□□□□ -1.83
CDH13-206ENST00000562601 IFI27L1Q96BM0 104 aa3.6□□□□□ -1.83
CDH13-206ENST00000562601 CHTOPQ9Y3Y2 248 aaKnown RBP3.6□□□□□ -1.83
CDH13-206ENST00000562601 NDUFC2-KCTD14E9PQ53 114 aa3.59□□□□□ -1.83
CDH13-206ENST00000562601 F8VRH5 84 aa3.59□□□□□ -1.83
CDH13-206ENST00000562601 FABP4P15090 132 aa3.59□□□□□ -1.83
CDH13-206ENST00000562601 SEC61BP60468 96 aaKnown RBP3.59□□□□□ -1.83
CDH13-206ENST00000562601 PRR3P79522 188 aaKnown RBP3.59□□□□□ -1.83
CDH13-206ENST00000562601 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
CDH13-206ENST00000562601 KRTAP7-1Q8IUC3 87 aa3.59□□□□□ -1.83
CDH13-206ENST00000562601 XAGE1AQ9HD64 81 aa3.59□□□□□ -1.83
CDH13-206ENST00000562601 IGLV5-37A0A075B6J1 123 aa3.58□□□□□ -1.84
CDH13-206ENST00000562601 LEPROTL1O95214 131 aa3.58□□□□□ -1.84
CDH13-206ENST00000562601 PFN2P35080 140 aa3.58□□□□□ -1.84
CDH13-206ENST00000562601 KRTAP11-1Q8IUC1 163 aa3.58□□□□□ -1.84
CDH13-206ENST00000562601 ZNF625Q96I27 306 aaPredicted RBP3.58□□□□□ -1.84
CDH13-206ENST00000562601 PSORS1C2Q9UIG4 136 aa3.58□□□□□ -1.84
CDH13-206ENST00000562601 TNXBP22105 4242 aa3.58□□□□□ -1.84
CDH13-206ENST00000562601 TRAV12-1A0A0B4J245 112 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 M0QXV9 152 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST1H2BKO60814 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST1H2BJP06899 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST1H2BOP23527 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST1H2BBP33778 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 CXCL5P42830 114 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST1H2BDP58876 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST1H2BCP62807 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST2H2BEQ16778 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 C1orf137Q5JT78 98 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST1H2BHQ93079 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST1H2BNQ99877 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 HIST1H2BMQ99879 126 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 PMCHL2Q9BQD1 86 aa3.57□□□□□ -1.84
CDH13-206ENST00000562601 A0A0U1RRA0 63 aa3.56□□□□□ -1.84
CDH13-206ENST00000562601 TMEM223A0PJW6 202 aa3.56□□□□□ -1.84
CDH13-206ENST00000562601 ATP6V1G1O75348 118 aa3.56□□□□□ -1.84
CDH13-206ENST00000562601 UBE2BP63146 152 aa3.56□□□□□ -1.84
CDH13-206ENST00000562601 C22orf24Q9Y442 160 aa3.56□□□□□ -1.84
CDH13-206ENST00000562601 OXTP01178 125 aa3.55□□□□□ -1.84
CDH13-206ENST00000562601 HSPB8Q9UJY1 196 aa3.55□□□□□ -1.84
CDH13-206ENST00000562601 ERG28Q9UKR5 140 aa3.55□□□□□ -1.84
CDH13-206ENST00000562601 HMCN2Q8NDA2 5059 aa3.54□□□□□ -1.84
CDH13-206ENST00000562601 RPL37AP8A6NKH3 93 aa3.54□□□□□ -1.84
CDH13-206ENST00000562601 MT3P25713 68 aa3.54□□□□□ -1.84
CDH13-206ENST00000562601 LINC00158P58513 81 aa3.54□□□□□ -1.84
CDH13-206ENST00000562601 SRSF9Q13242 221 aaKnown RBP eCLIP3.54□□□□□ -1.84
CDH13-206ENST00000562601 LBHQ53QV2 105 aaPredicted RBP3.54□□□□□ -1.84
CDH13-206ENST00000562601 SPINK6Q6UWN8 80 aa3.54□□□□□ -1.84
CDH13-206ENST00000562601 MAP1LC3CQ9BXW4 147 aa3.54□□□□□ -1.84
CDH13-206ENST00000562601 DPM2O94777 84 aa3.53□□□□□ -1.84
CDH13-206ENST00000562601 IGKCP01834 107 aa3.53□□□□□ -1.84
CDH13-206ENST00000562601 IGLV7-43P04211 117 aa3.53□□□□□ -1.84
CDH13-206ENST00000562601 SMIM13P0DJ93 91 aa3.53□□□□□ -1.84
CDH13-206ENST00000562601 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
CDH13-206ENST00000562601 TSPEAR-AS2P59090 65 aa3.53□□□□□ -1.84
CDH13-206ENST00000562601 MRPL55Q7Z7F7 128 aaKnown RBP3.53□□□□□ -1.84
CDH13-206ENST00000562601 Q8NDZ9 215 aa3.53□□□□□ -1.84
CDH13-206ENST00000562601 LINC00167Q96N53 147 aa3.53□□□□□ -1.84
CDH13-206ENST00000562601 SND1-IT1Q9HBX3 110 aa3.53□□□□□ -1.84
CDH13-206ENST00000562601 IGKV2-28A0A075B6P5 120 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 SYS1-DBNDD2H3BUS1 97 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 LEPROTO15243 131 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 IGKV2D-28P01615 120 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 S100A1P23297 94 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 PLNP26678 52 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 COX17Q14061 63 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 MEIG1Q5JSS6 88 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 KRTAP5-11Q6L8G4 156 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 Q75L30 129 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 NKAPP1Q8N9T2 125 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 NDUFA12Q9UI09 145 aa3.52□□□□□ -1.85
CDH13-206ENST00000562601 MYMXA0A1B0GTQ4 84 aa3.51□□□□□ -1.85
CDH13-206ENST00000562601 J3QQQ9 107 aa3.51□□□□□ -1.85
CDH13-206ENST00000562601 C3orf79P0CE67 100 aa3.51□□□□□ -1.85
CDH13-206ENST00000562601 KRTDAPP60985 99 aa3.51□□□□□ -1.85
CDH13-206ENST00000562601 HERVK_113P61574 105 aa3.51□□□□□ -1.85
CDH13-206ENST00000562601 REG3GQ6UW15 175 aa3.51□□□□□ -1.85
CDH13-206ENST00000562601 DAND5Q8N907 189 aa3.51□□□□□ -1.85
CDH13-206ENST00000562601 PLEKHB2Q96CS7 222 aa3.51□□□□□ -1.85
CDH13-206ENST00000562601 LINC01600Q96MT4 127 aa3.51□□□□□ -1.85
CDH13-206ENST00000562601 TMEM238C9JI98 176 aa3.5□□□□□ -1.85
CDH13-206ENST00000562601 LGALS3P17931 250 aaKnown RBP3.5□□□□□ -1.85
CDH13-206ENST00000562601 SFTA2Q6UW10 78 aa3.5□□□□□ -1.85
CDH13-206ENST00000562601 MIR7-3HGQ8N6C7 128 aa3.5□□□□□ -1.85
CDH13-206ENST00000562601 KRTAP2-2Q9BYT5 123 aa3.5□□□□□ -1.85
CDH13-206ENST00000562601 TP73-AS1Q9UF72 201 aa3.5□□□□□ -1.85
CDH13-206ENST00000562601 UBR4Q5T4S7 5183 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms