RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 NKAPP1Q8N9T2 125 aa10.11□□□□□ -0.79
PKD1-226ENST00000562425 LRP1Q07954 4544 aaKnown RBP10.1□□□□□ -0.79
PKD1-226ENST00000562425 RPL24P83731 157 aaKnown RBP10.1□□□□□ -0.79
PKD1-226ENST00000562425 SRSF9Q13242 221 aaKnown RBP eCLIP10.1□□□□□ -0.79
PKD1-226ENST00000562425 MEIG1Q5JSS6 88 aa10.1□□□□□ -0.79
PKD1-226ENST00000562425 IGLV5-37A0A075B6J1 123 aa10.09□□□□□ -0.79
PKD1-226ENST00000562425 J3QQQ9 107 aa10.09□□□□□ -0.79
PKD1-226ENST00000562425 LINC01545Q5VT33 79 aa10.09□□□□□ -0.79
PKD1-226ENST00000562425 IGLV7-43P04211 117 aa10.08□□□□□ -0.8
PKD1-226ENST00000562425 LGALS3P17931 250 aaKnown RBP10.08□□□□□ -0.8
PKD1-226ENST00000562425 NMUP48645 174 aa10.08□□□□□ -0.8
PKD1-226ENST00000562425 REG3GQ6UW15 175 aa10.08□□□□□ -0.8
PKD1-226ENST00000562425 KRTAP11-1Q8IUC1 163 aa10.08□□□□□ -0.8
PKD1-226ENST00000562425 A0A0U1RRA0 63 aa10.07□□□□□ -0.8
PKD1-226ENST00000562425 C3orf79P0CE67 100 aa10.07□□□□□ -0.8
PKD1-226ENST00000562425 SMIM13P0DJ93 91 aa10.07□□□□□ -0.8
PKD1-226ENST00000562425 LINC00167Q96N53 147 aa10.07□□□□□ -0.8
PKD1-226ENST00000562425 KRTDAPP60985 99 aa10.06□□□□□ -0.8
PKD1-226ENST00000562425 C20orf202A1L168 122 aa10.05□□□□□ -0.8
PKD1-226ENST00000562425 E9PLD3 99 aa10.05□□□□□ -0.8
PKD1-226ENST00000562425 TSPEAR-AS2P59090 65 aa10.05□□□□□ -0.8
PKD1-226ENST00000562425 DIRC1Q969H9 104 aa10.05□□□□□ -0.8
PKD1-226ENST00000562425 FAT3Q8TDW7 4589 aa10.05□□□□□ -0.8
PKD1-226ENST00000562425 GAGE10A6NGK3 116 aa10.04□□□□□ -0.8
PKD1-226ENST00000562425 VPREB1P12018 145 aa10.04□□□□□ -0.8
PKD1-226ENST00000562425 UBR4Q5T4S7 5183 aa10.04□□□□□ -0.8
PKD1-226ENST00000562425 RPL37AP8A6NKH3 93 aa10.03□□□□□ -0.8
PKD1-226ENST00000562425 AKR1D1P51857 326 aa10.03□□□□□ -0.8
PKD1-226ENST00000562425 MIR7-3HGQ8N6C7 128 aa10.03□□□□□ -0.8
PKD1-226ENST00000562425 PKHD1L1Q86WI1 4243 aa10.03□□□□□ -0.8
PKD1-226ENST00000562425 S100A6P06703 90 aa10.02□□□□□ -0.81
PKD1-226ENST00000562425 S100A2P29034 98 aa10.02□□□□□ -0.81
PKD1-226ENST00000562425 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
PKD1-226ENST00000562425 BOD1L2Q8IYS8 172 aa10□□□□□ -0.81
PKD1-226ENST00000562425 ZNF861PO60384 105 aa9.99□□□□□ -0.81
PKD1-226ENST00000562425 BCE1O60756 84 aa9.99□□□□□ -0.81
PKD1-226ENST00000562425 HIST3H2BBQ8N257 126 aa9.99□□□□□ -0.81
PKD1-226ENST00000562425 IGLV1-50A0A075B6I6 118 aa9.98□□□□□ -0.81
PKD1-226ENST00000562425 IGKV2-28A0A075B6P5 120 aa9.98□□□□□ -0.81
PKD1-226ENST00000562425 H0Y9J4 135 aa9.98□□□□□ -0.81
PKD1-226ENST00000562425 M0R378 163 aa9.98□□□□□ -0.81
PKD1-226ENST00000562425 IGKV2D-28P01615 120 aa9.98□□□□□ -0.81
PKD1-226ENST00000562425 RPL28P46779 137 aaKnown RBP9.98□□□□□ -0.81
PKD1-226ENST00000562425 MIEN1Q9BRT3 115 aa9.97□□□□□ -0.81
PKD1-226ENST00000562425 IGKV2D-26A0A0A0MRZ7 120 aa9.96□□□□□ -0.82
PKD1-226ENST00000562425 A0A0J9YXY3 114 aa9.96□□□□□ -0.82
PKD1-226ENST00000562425 HIST1H2BLQ99880 126 aa9.96□□□□□ -0.82
PKD1-226ENST00000562425 LOC107984156A0A0G2JMH3 177 aa9.95□□□□□ -0.82
PKD1-226ENST00000562425 MT1HL1P0DM35 61 aa9.95□□□□□ -0.82
PKD1-226ENST00000562425 ARL17AQ8IVW1 177 aa9.95□□□□□ -0.82
PKD1-226ENST00000562425 DAND5Q8N907 189 aa9.95□□□□□ -0.82
PKD1-226ENST00000562425 Q8NDZ9 215 aa9.95□□□□□ -0.82
PKD1-226ENST00000562425 UBE2AP49459 152 aa9.94□□□□□ -0.82
PKD1-226ENST00000562425 ZNF815PA8K554 130 aa9.93□□□□□ -0.82
PKD1-226ENST00000562425 SNRPEP62304 92 aaKnown RBP9.93□□□□□ -0.82
PKD1-226ENST00000562425 TMEM126AQ9H061 195 aa9.93□□□□□ -0.82
PKD1-226ENST00000562425 TIMM17BO60830 172 aa9.92□□□□□ -0.82
PKD1-226ENST00000562425 NCR3O14931 201 aa9.91□□□□□ -0.82
PKD1-226ENST00000562425 S100A12P80511 92 aa9.91□□□□□ -0.82
PKD1-226ENST00000562425 ATOH7Q8N100 152 aa9.91□□□□□ -0.82
PKD1-226ENST00000562425 TMEM238C9JI98 176 aa9.9□□□□□ -0.82
PKD1-226ENST00000562425 KRTAP10-8P60410 259 aa9.9□□□□□ -0.82
PKD1-226ENST00000562425 ADAMTSL4-AS1Q5T5F5 129 aa9.9□□□□□ -0.82
PKD1-226ENST00000562425 TRBV10-2A0A0K0K1G8 114 aa9.89□□□□□ -0.83
PKD1-226ENST00000562425 NDUFC2O95298 119 aa9.89□□□□□ -0.83
PKD1-226ENST00000562425 FAM19A1Q7Z5A9 133 aa9.89□□□□□ -0.83
PKD1-226ENST00000562425 SPANXB1Q9NS25 103 aaPredicted RBP9.89□□□□□ -0.83
PKD1-226ENST00000562425 PRYO14603 147 aa9.88□□□□□ -0.83
PKD1-226ENST00000562425 ANKRD39Q53RE8 183 aa9.88□□□□□ -0.83
PKD1-226ENST00000562425 SCGB1D4Q6XE38 83 aa9.88□□□□□ -0.83
PKD1-226ENST00000562425 C5orf52A6NGY3 159 aa9.87□□□□□ -0.83
PKD1-226ENST00000562425 HSBP1L1C9JCN9 74 aa9.87□□□□□ -0.83
PKD1-226ENST00000562425 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
PKD1-226ENST00000562425 TTTY13Q9BZ97 58 aa9.87□□□□□ -0.83
PKD1-226ENST00000562425 TRBV10-3A0A0K0K1G6 114 aa9.86□□□□□ -0.83
PKD1-226ENST00000562425 NPC2P61916 151 aa9.86□□□□□ -0.83
PKD1-226ENST00000562425 LITAFQ99732 161 aa9.86□□□□□ -0.83
PKD1-226ENST00000562425 KCNQ1DNQ9H478 68 aa9.86□□□□□ -0.83
PKD1-226ENST00000562425 KRTAP1-4P0C5Y4 121 aa9.85□□□□□ -0.83
PKD1-226ENST00000562425 DDTP30046 118 aa9.85□□□□□ -0.83
PKD1-226ENST00000562425 PRLHP81277 87 aa9.85□□□□□ -0.83
PKD1-226ENST00000562425 S100A7L2Q5SY68 101 aa9.85□□□□□ -0.83
PKD1-226ENST00000562425 SOSTDC1Q6X4U4 206 aa9.85□□□□□ -0.83
PKD1-226ENST00000562425 PRR26Q8N8Z3 221 aa9.85□□□□□ -0.83
PKD1-226ENST00000562425 LINC00308Q8TCZ7 52 aa9.85□□□□□ -0.83
PKD1-226ENST00000562425 RPL13AP40429 203 aaKnown RBP9.84□□□□□ -0.83
PKD1-226ENST00000562425 SCGB1D1O95968 90 aa9.83□□□□□ -0.84
PKD1-226ENST00000562425 LINC00337Q8N6G1 96 aa9.83□□□□□ -0.84
PKD1-226ENST00000562425 COPS9Q8WXC6 57 aa9.83□□□□□ -0.84
PKD1-226ENST00000562425 SPANXCQ9NY87 97 aa9.83□□□□□ -0.84
PKD1-226ENST00000562425 CBY1Q9Y3M2 126 aa9.83□□□□□ -0.84
PKD1-226ENST00000562425 ETDCA0A1B0GVM5 59 aa9.82□□□□□ -0.84
PKD1-226ENST00000562425 EIF4EBP3O60516 100 aaPredicted RBP9.81□□□□□ -0.84
PKD1-226ENST00000562425 SPRR1AP35321 89 aa9.81□□□□□ -0.84
PKD1-226ENST00000562425 Q6ZVH6 145 aa9.81□□□□□ -0.84
PKD1-226ENST00000562425 PCP2Q8IVA1 136 aa9.81□□□□□ -0.84
PKD1-226ENST00000562425 SPANXDQ9BXN6 97 aa9.81□□□□□ -0.84
PKD1-226ENST00000562425 LRP2P98164 4655 aa9.81□□□□□ -0.84
PKD1-226ENST00000562425 TNXBP22105 4242 aa9.8□□□□□ -0.84
PKD1-226ENST00000562425 IGLV6-57P01721 117 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms