RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 LBHQ53QV2 105 aaPredicted RBP10.31□□□□□ -0.76
CLK3-207ENST00000562389 MEIG1Q5JSS6 88 aa10.31□□□□□ -0.76
CLK3-207ENST00000562389 MRPL55Q7Z7F7 128 aaKnown RBP10.31□□□□□ -0.76
CLK3-207ENST00000562389 HIST3H2BBQ8N257 126 aa10.31□□□□□ -0.76
CLK3-207ENST00000562389 S100A6P06703 90 aa10.3□□□□□ -0.76
CLK3-207ENST00000562389 SMIM13P0DJ93 91 aa10.3□□□□□ -0.76
CLK3-207ENST00000562389 C1orf137Q5JT78 98 aa10.3□□□□□ -0.76
CLK3-207ENST00000562389 C20orf202A1L168 122 aa10.29□□□□□ -0.76
CLK3-207ENST00000562389 KRTAP29-1A8MX34 341 aaPredicted RBP10.29□□□□□ -0.76
CLK3-207ENST00000562389 A0A0U1RRA0 63 aa10.28□□□□□ -0.76
CLK3-207ENST00000562389 S100A2P29034 98 aa10.28□□□□□ -0.76
CLK3-207ENST00000562389 NKAPP1Q8N9T2 125 aa10.28□□□□□ -0.76
CLK3-207ENST00000562389 HIST1H2BLQ99880 126 aa10.28□□□□□ -0.76
CLK3-207ENST00000562389 OXTP01178 125 aa10.27□□□□□ -0.77
CLK3-207ENST00000562389 VPREB1P12018 145 aa10.27□□□□□ -0.77
CLK3-207ENST00000562389 SRSF9Q13242 221 aaKnown RBP eCLIP10.27□□□□□ -0.77
CLK3-207ENST00000562389 SPINK6Q6UWN8 80 aa10.27□□□□□ -0.77
CLK3-207ENST00000562389 MYCBP2O75592 4640 aa10.26□□□□□ -0.77
CLK3-207ENST00000562389 AKR1D1P51857 326 aa10.26□□□□□ -0.77
CLK3-207ENST00000562389 RPL24P83731 157 aaKnown RBP10.26□□□□□ -0.77
CLK3-207ENST00000562389 MIR7-3HGQ8N6C7 128 aa10.26□□□□□ -0.77
CLK3-207ENST00000562389 LINC00167Q96N53 147 aa10.26□□□□□ -0.77
CLK3-207ENST00000562389 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
CLK3-207ENST00000562389 Q8NDZ9 215 aa10.24□□□□□ -0.77
CLK3-207ENST00000562389 SNRPEP62304 92 aaKnown RBP10.23□□□□□ -0.77
CLK3-207ENST00000562389 IGKV2D-26A0A0A0MRZ7 120 aa10.22□□□□□ -0.77
CLK3-207ENST00000562389 GAGE10A6NGK3 116 aa10.22□□□□□ -0.77
CLK3-207ENST00000562389 C5orf52A6NGY3 159 aa10.22□□□□□ -0.77
CLK3-207ENST00000562389 A0A0J9YXY3 114 aa10.21□□□□□ -0.77
CLK3-207ENST00000562389 RPL37AP8A6NKH3 93 aa10.21□□□□□ -0.77
CLK3-207ENST00000562389 J3QL48 77 aa10.21□□□□□ -0.77
CLK3-207ENST00000562389 LOC107984156A0A0G2JMH3 177 aa10.2□□□□□ -0.78
CLK3-207ENST00000562389 ARL17AQ8IVW1 177 aa10.2□□□□□ -0.78
CLK3-207ENST00000562389 BOD1L2Q8IYS8 172 aa10.2□□□□□ -0.78
CLK3-207ENST00000562389 ATOH7Q8N100 152 aa10.2□□□□□ -0.78
CLK3-207ENST00000562389 DAND5Q8N907 189 aa10.19□□□□□ -0.78
CLK3-207ENST00000562389 FAT3Q8TDW7 4589 aa10.18□□□□□ -0.78
CLK3-207ENST00000562389 IGLV1-50A0A075B6I6 118 aa10.18□□□□□ -0.78
CLK3-207ENST00000562389 ZNF815PA8K554 130 aa10.18□□□□□ -0.78
CLK3-207ENST00000562389 ANKRD39Q53RE8 183 aa10.18□□□□□ -0.78
CLK3-207ENST00000562389 REG3GQ6UW15 175 aa10.18□□□□□ -0.78
CLK3-207ENST00000562389 LRP1Q07954 4544 aaKnown RBP10.18□□□□□ -0.78
CLK3-207ENST00000562389 IGKV2-28A0A075B6P5 120 aa10.17□□□□□ -0.78
CLK3-207ENST00000562389 M0R378 163 aa10.17□□□□□ -0.78
CLK3-207ENST00000562389 BCE1O60756 84 aa10.17□□□□□ -0.78
CLK3-207ENST00000562389 TIMM17BO60830 172 aa10.17□□□□□ -0.78
CLK3-207ENST00000562389 IGKV2D-28P01615 120 aa10.17□□□□□ -0.78
CLK3-207ENST00000562389 DIRC1Q969H9 104 aa10.17□□□□□ -0.78
CLK3-207ENST00000562389 TTTY13Q9BZ97 58 aa10.16□□□□□ -0.78
CLK3-207ENST00000562389 H0Y9J4 135 aa10.15□□□□□ -0.78
CLK3-207ENST00000562389 ZNF861PO60384 105 aa10.15□□□□□ -0.78
CLK3-207ENST00000562389 ADAMTSL4-AS1Q5T5F5 129 aa10.15□□□□□ -0.78
CLK3-207ENST00000562389 LINC01600Q96MT4 127 aa10.15□□□□□ -0.78
CLK3-207ENST00000562389 LITAFQ99732 161 aa10.15□□□□□ -0.78
CLK3-207ENST00000562389 MIEN1Q9BRT3 115 aa10.15□□□□□ -0.78
CLK3-207ENST00000562389 DMBT1Q9UGM3 2413 aaPredicted RBP10.15□□□□□ -0.79
CLK3-207ENST00000562389 NCR3O14931 201 aa10.13□□□□□ -0.79
CLK3-207ENST00000562389 HERC1Q15751 4861 aa10.13□□□□□ -0.79
CLK3-207ENST00000562389 NDUFC2O95298 119 aa10.12□□□□□ -0.79
CLK3-207ENST00000562389 MT1HL1P0DM35 61 aa10.12□□□□□ -0.79
CLK3-207ENST00000562389 RPL28P46779 137 aaKnown RBP10.12□□□□□ -0.79
CLK3-207ENST00000562389 SOSTDC1Q6X4U4 206 aa10.12□□□□□ -0.79
CLK3-207ENST00000562389 TMEM126AQ9H061 195 aa10.12□□□□□ -0.79
CLK3-207ENST00000562389 TRBV10-2A0A0K0K1G8 114 aa10.11□□□□□ -0.79
CLK3-207ENST00000562389 TMEM238C9JI98 176 aa10.11□□□□□ -0.79
CLK3-207ENST00000562389 KRTAP13-1Q8IUC0 172 aa10.11□□□□□ -0.79
CLK3-207ENST00000562389 SPANXB1Q9NS25 103 aaPredicted RBP10.11□□□□□ -0.79
CLK3-207ENST00000562389 NPC2P61916 151 aa10.1□□□□□ -0.79
CLK3-207ENST00000562389 SCGB1D4Q6XE38 83 aa10.1□□□□□ -0.79
CLK3-207ENST00000562389 PCP2Q8IVA1 136 aa10.1□□□□□ -0.79
CLK3-207ENST00000562389 HSBP1L1C9JCN9 74 aa10.09□□□□□ -0.79
CLK3-207ENST00000562389 PRYO14603 147 aa10.09□□□□□ -0.79
CLK3-207ENST00000562389 EIF4EBP3O60516 100 aaPredicted RBP10.09□□□□□ -0.79
CLK3-207ENST00000562389 SCGB1D1O95968 90 aa10.09□□□□□ -0.79
CLK3-207ENST00000562389 UBE2AP49459 152 aa10.09□□□□□ -0.79
CLK3-207ENST00000562389 LINC00308Q8TCZ7 52 aa10.09□□□□□ -0.79
CLK3-207ENST00000562389 TRBV10-3A0A0K0K1G6 114 aa10.08□□□□□ -0.8
CLK3-207ENST00000562389 KCNQ1DNQ9H478 68 aa10.08□□□□□ -0.8
CLK3-207ENST00000562389 FAM19A1Q7Z5A9 133 aa10.07□□□□□ -0.8
CLK3-207ENST00000562389 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
CLK3-207ENST00000562389 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
CLK3-207ENST00000562389 KRTAP1-4P0C5Y4 121 aa10.06□□□□□ -0.8
CLK3-207ENST00000562389 DDTP30046 118 aa10.05□□□□□ -0.8
CLK3-207ENST00000562389 SPRR1AP35321 89 aa10.05□□□□□ -0.8
CLK3-207ENST00000562389 KRTAP10-8P60410 259 aa10.05□□□□□ -0.8
CLK3-207ENST00000562389 PRLHP81277 87 aa10.05□□□□□ -0.8
CLK3-207ENST00000562389 S100A12P80511 92 aa10.04□□□□□ -0.8
CLK3-207ENST00000562389 Q6ZVH6 145 aa10.04□□□□□ -0.8
CLK3-207ENST00000562389 TNXBP22105 4242 aa10.03□□□□□ -0.8
CLK3-207ENST00000562389 IGLV6-57P01721 117 aa10.03□□□□□ -0.8
CLK3-207ENST00000562389 S100A7L2Q5SY68 101 aa10.03□□□□□ -0.8
CLK3-207ENST00000562389 LINC00337Q8N6G1 96 aa10.03□□□□□ -0.8
CLK3-207ENST00000562389 PPDPFQ9H3Y8 114 aa10.03□□□□□ -0.8
CLK3-207ENST00000562389 KRTAP4-16G5E9R7 235 aaPredicted RBP10.02□□□□□ -0.81
CLK3-207ENST00000562389 IFITM1P13164 125 aa10.02□□□□□ -0.81
CLK3-207ENST00000562389 COPS9Q8WXC6 57 aa10.02□□□□□ -0.81
CLK3-207ENST00000562389 ETDCA0A1B0GVM5 59 aa9.99□□□□□ -0.81
CLK3-207ENST00000562389 JOSD1Q15040 202 aaPredicted RBP9.99□□□□□ -0.81
CLK3-207ENST00000562389 PRR26Q8N8Z3 221 aa9.99□□□□□ -0.81
CLK3-207ENST00000562389 TMA7Q9Y2S6 64 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms