RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 IGLV5-39A0A0G2JS06 123 aa10.31□□□□□ -0.76
TPM1-226ENST00000560959 RAB14P61106 215 aa10.31□□□□□ -0.76
TPM1-226ENST00000560959 ANAPC16Q96DE5 110 aa10.31□□□□□ -0.76
TPM1-226ENST00000560959 PMVKQ15126 192 aa10.3□□□□□ -0.76
TPM1-226ENST00000560959 Q8NDZ9 215 aa10.3□□□□□ -0.76
TPM1-226ENST00000560959 KRTAP19-2Q3LHN2 52 aa10.29□□□□□ -0.76
TPM1-226ENST00000560959 LINC01546A6NGU7 62 aa10.28□□□□□ -0.76
TPM1-226ENST00000560959 MT1HP80294 61 aa10.28□□□□□ -0.76
TPM1-226ENST00000560959 Q8N377 158 aa10.28□□□□□ -0.76
TPM1-226ENST00000560959 MT-ND4LP03901 98 aa10.27□□□□□ -0.77
TPM1-226ENST00000560959 SFTA2Q6UW10 78 aa10.27□□□□□ -0.77
TPM1-226ENST00000560959 SLC25A20O43772 301 aa10.26□□□□□ -0.77
TPM1-226ENST00000560959 LINC00483Q53H64 154 aa10.26□□□□□ -0.77
TPM1-226ENST00000560959 SSBP3-AS1Q7Z2R9 100 aa10.26□□□□□ -0.77
TPM1-226ENST00000560959 IGLC3P0DOY3 106 aa10.24□□□□□ -0.77
TPM1-226ENST00000560959 SMCR5Q8TEV8 140 aa10.24□□□□□ -0.77
TPM1-226ENST00000560959 PRYO14603 147 aa10.23□□□□□ -0.77
TPM1-226ENST00000560959 SPRR1AP35321 89 aa10.23□□□□□ -0.77
TPM1-226ENST00000560959 LORP23490 312 aaPredicted RBP10.22□□□□□ -0.77
TPM1-226ENST00000560959 KIAA1644Q3SXP7 199 aa10.21□□□□□ -0.77
TPM1-226ENST00000560959 ZNF625Q96I27 306 aaPredicted RBP10.21□□□□□ -0.77
TPM1-226ENST00000560959 ZNF22P17026 224 aaPredicted RBP10.2□□□□□ -0.78
TPM1-226ENST00000560959 KCNQ1DNQ9H478 68 aa10.2□□□□□ -0.78
TPM1-226ENST00000560959 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
TPM1-226ENST00000560959 LINC00158P58513 81 aa10.17□□□□□ -0.78
TPM1-226ENST00000560959 KRTAP10-6P60371 365 aaPredicted RBP10.17□□□□□ -0.78
TPM1-226ENST00000560959 MOBPQ13875 183 aa10.17□□□□□ -0.78
TPM1-226ENST00000560959 ETDCA0A1B0GVM5 59 aa10.16□□□□□ -0.78
TPM1-226ENST00000560959 GAGE2AQ6NT46 116 aa10.16□□□□□ -0.78
TPM1-226ENST00000560959 hCG_2014768A0A024R1R8 64 aa10.15□□□□□ -0.78
TPM1-226ENST00000560959 IGLV9-49A0A0B4J1Y8 123 aa10.14□□□□□ -0.79
TPM1-226ENST00000560959 TRAV9-1A0A075B6T8 112 aa10.13□□□□□ -0.79
TPM1-226ENST00000560959 FA2HQ7L5A8 372 aa10.13□□□□□ -0.79
TPM1-226ENST00000560959 IGLV8-61A0A075B6I0 122 aa10.12□□□□□ -0.79
TPM1-226ENST00000560959 NDUFA6P56556 154 aa10.12□□□□□ -0.79
TPM1-226ENST00000560959 SMCO4Q9NRQ5 59 aa10.12□□□□□ -0.79
TPM1-226ENST00000560959 PCOTHQ58A44 107 aa10.11□□□□□ -0.79
TPM1-226ENST00000560959 S100A12P80511 92 aa10.1□□□□□ -0.79
TPM1-226ENST00000560959 BOD1L2Q8IYS8 172 aa10.1□□□□□ -0.79
TPM1-226ENST00000560959 B5MCH6 92 aa10.09□□□□□ -0.79
TPM1-226ENST00000560959 TMEM170BQ5T4T1 132 aa10.09□□□□□ -0.79
TPM1-226ENST00000560959 C11orf86A6NJI1 115 aa10.08□□□□□ -0.8
TPM1-226ENST00000560959 ATP6V1G1O75348 118 aa10.08□□□□□ -0.8
TPM1-226ENST00000560959 ERC2-IT1O76042 136 aa10.08□□□□□ -0.8
TPM1-226ENST00000560959 TRBV10-3A0A0K0K1G6 114 aa10.07□□□□□ -0.8
TPM1-226ENST00000560959 A0A0U1RRA0 63 aa10.07□□□□□ -0.8
TPM1-226ENST00000560959 NCR3O14931 201 aa10.07□□□□□ -0.8
TPM1-226ENST00000560959 A0A096LNJ9 63 aa10.06□□□□□ -0.8
TPM1-226ENST00000560959 SMIM13P0DJ93 91 aa10.05□□□□□ -0.8
TPM1-226ENST00000560959 COX19Q49B96 90 aa10.05□□□□□ -0.8
TPM1-226ENST00000560959 BAGE3Q86Y29 109 aa10.04□□□□□ -0.8
TPM1-226ENST00000560959 Q9BRP9 147 aa10.04□□□□□ -0.8
TPM1-226ENST00000560959 LINC00587B1AMM8 73 aa10.03□□□□□ -0.8
TPM1-226ENST00000560959 M0R2T5 61 aa10.03□□□□□ -0.8
TPM1-226ENST00000560959 MIR7-3HGQ8N6C7 128 aa10.03□□□□□ -0.8
TPM1-226ENST00000560959 Q6ZRX8 168 aa10.02□□□□□ -0.81
TPM1-226ENST00000560959 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
TPM1-226ENST00000560959 KRTAP9-7A8MTY7 169 aa10.01□□□□□ -0.81
TPM1-226ENST00000560959 HBDP02042 147 aa10.01□□□□□ -0.81
TPM1-226ENST00000560959 HERV-K104P63124 156 aa10.01□□□□□ -0.81
TPM1-226ENST00000560959 FLGP20930 4061 aaPredicted RBP10□□□□□ -0.81
TPM1-226ENST00000560959 LINC00614P0C842 121 aa10□□□□□ -0.81
TPM1-226ENST00000560959 MEIG1Q5JSS6 88 aa10□□□□□ -0.81
TPM1-226ENST00000560959 C9orf153Q5TBE3 101 aa10□□□□□ -0.81
TPM1-226ENST00000560959 LOC107984156A0A0G2JMH3 177 aa9.99□□□□□ -0.81
TPM1-226ENST00000560959 TRBV10-2A0A0K0K1G8 114 aa9.99□□□□□ -0.81
TPM1-226ENST00000560959 S100PP25815 95 aa9.99□□□□□ -0.81
TPM1-226ENST00000560959 FABP9Q0Z7S8 132 aa9.99□□□□□ -0.81
TPM1-226ENST00000560959 ARL17AQ8IVW1 177 aa9.99□□□□□ -0.81
TPM1-226ENST00000560959 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
TPM1-226ENST00000560959 C5orf52A6NGY3 159 aa9.98□□□□□ -0.81
TPM1-226ENST00000560959 CHTOPQ9Y3Y2 248 aaKnown RBP9.98□□□□□ -0.81
TPM1-226ENST00000560959 DDTP30046 118 aa9.97□□□□□ -0.81
TPM1-226ENST00000560959 JOSD1Q15040 202 aaPredicted RBP9.97□□□□□ -0.81
TPM1-226ENST00000560959 URB1-AS1Q96HZ7 61 aa9.97□□□□□ -0.81
TPM1-226ENST00000560959 MAP1LC3CQ9BXW4 147 aa9.97□□□□□ -0.81
TPM1-226ENST00000560959 C9orf92A6NGG3 77 aa9.96□□□□□ -0.82
TPM1-226ENST00000560959 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.96□□□□□ -0.82
TPM1-226ENST00000560959 SEC11CQ9BY50 192 aa9.94□□□□□ -0.82
TPM1-226ENST00000560959 PMCHL1Q16048 86 aa9.93□□□□□ -0.82
TPM1-226ENST00000560959 C18orf32Q8TCD1 76 aa9.93□□□□□ -0.82
TPM1-226ENST00000560959 TRAV12-1A0A0B4J245 112 aa9.92□□□□□ -0.82
TPM1-226ENST00000560959 IGLV6-57P01721 117 aa9.92□□□□□ -0.82
TPM1-226ENST00000560959 MYMXA0A1B0GTQ4 84 aa9.91□□□□□ -0.82
TPM1-226ENST00000560959 COX6B2Q6YFQ2 88 aa9.91□□□□□ -0.82
TPM1-226ENST00000560959 SPANXB1Q9NS25 103 aaPredicted RBP9.9□□□□□ -0.82
TPM1-226ENST00000560959 SLC25A34Q6PIV7 304 aa9.89□□□□□ -0.83
TPM1-226ENST00000560959 NDUFC2O95298 119 aa9.88□□□□□ -0.83
TPM1-226ENST00000560959 SPRR1BP22528 89 aa9.88□□□□□ -0.83
TPM1-226ENST00000560959 ST20-AS1Q8NBB2 130 aa9.88□□□□□ -0.83
TPM1-226ENST00000560959 TMEM218A2RU14 115 aa9.87□□□□□ -0.83
TPM1-226ENST00000560959 S100A7L2Q5SY68 101 aa9.87□□□□□ -0.83
TPM1-226ENST00000560959 TRAV23DV6A0A075B6W5 121 aa9.86□□□□□ -0.83
TPM1-226ENST00000560959 UQCC3Q6UW78 93 aa9.86□□□□□ -0.83
TPM1-226ENST00000560959 ZNF73O43830 326 aaPredicted RBP9.85□□□□□ -0.83
TPM1-226ENST00000560959 RPL37P61927 97 aaKnown RBP9.85□□□□□ -0.83
TPM1-226ENST00000560959 CD164Q04900 197 aa9.85□□□□□ -0.83
TPM1-226ENST00000560959 HRCT1Q6UXD1 115 aa9.85□□□□□ -0.83
TPM1-226ENST00000560959 IFITM2Q01629 132 aa9.84□□□□□ -0.83
TPM1-226ENST00000560959 IFI27L1Q96BM0 104 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms