RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 HIST1H2BMQ99879 126 aa7.93□□□□□ -1.14
SMAD3-213ENST00000560175 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
SMAD3-213ENST00000560175 RPL37AP8A6NKH3 93 aa7.92□□□□□ -1.14
SMAD3-213ENST00000560175 HERV-K104P63124 156 aa7.92□□□□□ -1.14
SMAD3-213ENST00000560175 RPL24P83731 157 aaKnown RBP7.92□□□□□ -1.14
SMAD3-213ENST00000560175 NKAPP1Q8N9T2 125 aa7.92□□□□□ -1.14
SMAD3-213ENST00000560175 PLNP26678 52 aa7.91□□□□□ -1.14
SMAD3-213ENST00000560175 PRR26Q8N8Z3 221 aa7.91□□□□□ -1.14
SMAD3-213ENST00000560175 GAGE10A6NGK3 116 aa7.9□□□□□ -1.14
SMAD3-213ENST00000560175 FABP4P15090 132 aa7.9□□□□□ -1.14
SMAD3-213ENST00000560175 RPL28P46779 137 aaKnown RBP7.9□□□□□ -1.14
SMAD3-213ENST00000560175 LOC107984156A0A0G2JMH3 177 aa7.89□□□□□ -1.15
SMAD3-213ENST00000560175 LINC00587B1AMM8 73 aa7.89□□□□□ -1.15
SMAD3-213ENST00000560175 LEPROTO15243 131 aa7.89□□□□□ -1.15
SMAD3-213ENST00000560175 DPM2O94777 84 aa7.89□□□□□ -1.15
SMAD3-213ENST00000560175 LINC00158P58513 81 aa7.89□□□□□ -1.15
SMAD3-213ENST00000560175 ARL17AQ8IVW1 177 aa7.89□□□□□ -1.15
SMAD3-213ENST00000560175 NDUFA12Q9UI09 145 aa7.89□□□□□ -1.15
SMAD3-213ENST00000560175 MYMXA0A1B0GTQ4 84 aa7.88□□□□□ -1.15
SMAD3-213ENST00000560175 H0Y8G0 127 aa7.88□□□□□ -1.15
SMAD3-213ENST00000560175 SMIM13P0DJ93 91 aa7.88□□□□□ -1.15
SMAD3-213ENST00000560175 TSPEAR-AS2P59090 65 aa7.88□□□□□ -1.15
SMAD3-213ENST00000560175 COA6Q5JTJ3 125 aaKnown RBP7.88□□□□□ -1.15
SMAD3-213ENST00000560175 PLEKHB2Q96CS7 222 aa7.88□□□□□ -1.15
SMAD3-213ENST00000560175 MAP1LC3CQ9BXW4 147 aa7.88□□□□□ -1.15
SMAD3-213ENST00000560175 IGKCP01834 107 aa7.87□□□□□ -1.15
SMAD3-213ENST00000560175 IGKV2-28A0A075B6P5 120 aa7.86□□□□□ -1.15
SMAD3-213ENST00000560175 IGKV2D-28P01615 120 aa7.86□□□□□ -1.15
SMAD3-213ENST00000560175 MIR7-3HGQ8N6C7 128 aa7.86□□□□□ -1.15
SMAD3-213ENST00000560175 PMCHL2Q9BQD1 86 aa7.86□□□□□ -1.15
SMAD3-213ENST00000560175 TMEM126AQ9H061 195 aa7.86□□□□□ -1.15
SMAD3-213ENST00000560175 A0A0U1RRA0 63 aa7.85□□□□□ -1.15
SMAD3-213ENST00000560175 SYS1-DBNDD2H3BUS1 97 aa7.85□□□□□ -1.15
SMAD3-213ENST00000560175 J3QQQ9 107 aa7.85□□□□□ -1.15
SMAD3-213ENST00000560175 M0R378 163 aa7.85□□□□□ -1.15
SMAD3-213ENST00000560175 RPL13AP40429 203 aaKnown RBP7.85□□□□□ -1.15
SMAD3-213ENST00000560175 NMUP48645 174 aa7.85□□□□□ -1.15
SMAD3-213ENST00000560175 LRP2P98164 4655 aa7.85□□□□□ -1.15
SMAD3-213ENST00000560175 IGKV2D-26A0A0A0MRZ7 120 aa7.84□□□□□ -1.15
SMAD3-213ENST00000560175 MEIG1Q5JSS6 88 aa7.84□□□□□ -1.15
SMAD3-213ENST00000560175 UBR4Q5T4S7 5183 aa7.83□□□□□ -1.16
SMAD3-213ENST00000560175 TMEM238C9JI98 176 aa7.83□□□□□ -1.16
SMAD3-213ENST00000560175 E9PLD3 99 aa7.83□□□□□ -1.16
SMAD3-213ENST00000560175 HERVK_113P61574 105 aa7.83□□□□□ -1.16
SMAD3-213ENST00000560175 LINC01545Q5VT33 79 aa7.83□□□□□ -1.16
SMAD3-213ENST00000560175 ATP6V1G1O75348 118 aa7.82□□□□□ -1.16
SMAD3-213ENST00000560175 UBE2AP49459 152 aa7.82□□□□□ -1.16
SMAD3-213ENST00000560175 PET117Q6UWS5 81 aa7.82□□□□□ -1.16
SMAD3-213ENST00000560175 BOD1L2Q8IYS8 172 aa7.82□□□□□ -1.16
SMAD3-213ENST00000560175 A0A087X002 238 aa7.81□□□□□ -1.16
SMAD3-213ENST00000560175 SPRR1AP35321 89 aa7.81□□□□□ -1.16
SMAD3-213ENST00000560175 KCNQ1DNQ9H478 68 aa7.81□□□□□ -1.16
SMAD3-213ENST00000560175 KRTAP4-16G5E9R7 235 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-213ENST00000560175 FAM229BQ4G0N7 80 aa7.8□□□□□ -1.16
SMAD3-213ENST00000560175 TRBV10-2A0A0K0K1G8 114 aa7.79□□□□□ -1.16
SMAD3-213ENST00000560175 C3orf79P0CE67 100 aa7.79□□□□□ -1.16
SMAD3-213ENST00000560175 CRYGAP11844 174 aa7.79□□□□□ -1.16
SMAD3-213ENST00000560175 LGALS3P17931 250 aaKnown RBP7.79□□□□□ -1.16
SMAD3-213ENST00000560175 PRLHP81277 87 aa7.79□□□□□ -1.16
SMAD3-213ENST00000560175 FAM19A1Q7Z5A9 133 aa7.79□□□□□ -1.16
SMAD3-213ENST00000560175 A0A0J9YXY3 114 aa7.78□□□□□ -1.16
SMAD3-213ENST00000560175 PRYO14603 147 aa7.78□□□□□ -1.16
SMAD3-213ENST00000560175 NDUFC2O95298 119 aa7.78□□□□□ -1.16
SMAD3-213ENST00000560175 LINC00337Q8N6G1 96 aa7.78□□□□□ -1.16
SMAD3-213ENST00000560175 DAND5Q8N907 189 aa7.78□□□□□ -1.16
SMAD3-213ENST00000560175 KRTAP13-2Q52LG2 175 aa7.77□□□□□ -1.17
SMAD3-213ENST00000560175 ADAMTSL4-AS1Q5T5F5 129 aa7.77□□□□□ -1.17
SMAD3-213ENST00000560175 TRBV10-3A0A0K0K1G6 114 aa7.76□□□□□ -1.17
SMAD3-213ENST00000560175 LITAFQ99732 161 aa7.76□□□□□ -1.17
SMAD3-213ENST00000560175 ANAPC11Q9NYG5 84 aa7.76□□□□□ -1.17
SMAD3-213ENST00000560175 LPAP08519 4548 aa7.75□□□□□ -1.17
SMAD3-213ENST00000560175 NCR3O14931 201 aa7.75□□□□□ -1.17
SMAD3-213ENST00000560175 EIF4EBP3O60516 100 aaPredicted RBP7.75□□□□□ -1.17
SMAD3-213ENST00000560175 SOSTDC1Q6X4U4 206 aa7.75□□□□□ -1.17
SMAD3-213ENST00000560175 TIMM17BO60830 172 aa7.74□□□□□ -1.17
SMAD3-213ENST00000560175 S100A1P23297 94 aa7.74□□□□□ -1.17
SMAD3-213ENST00000560175 TYMSOSQ8TAI1 123 aa7.74□□□□□ -1.17
SMAD3-213ENST00000560175 SPANXB1Q9NS25 103 aaPredicted RBP7.74□□□□□ -1.17
SMAD3-213ENST00000560175 IGLV6-57P01721 117 aa7.73□□□□□ -1.17
SMAD3-213ENST00000560175 CTAG1AP78358 180 aa7.73□□□□□ -1.17
SMAD3-213ENST00000560175 B5MCH6 92 aa7.71□□□□□ -1.18
SMAD3-213ENST00000560175 DDTP30046 118 aa7.71□□□□□ -1.18
SMAD3-213ENST00000560175 KRTDAPP60985 99 aa7.71□□□□□ -1.18
SMAD3-213ENST00000560175 SPRR4Q96PI1 79 aa7.71□□□□□ -1.18
SMAD3-213ENST00000560175 MIEN1Q9BRT3 115 aa7.71□□□□□ -1.18
SMAD3-213ENST00000560175 HIGD2AQ9BW72 106 aa7.71□□□□□ -1.18
SMAD3-213ENST00000560175 SMCR5Q8TEV8 140 aa7.7□□□□□ -1.18
SMAD3-213ENST00000560175 LINC00308Q8TCZ7 52 aa7.69□□□□□ -1.18
SMAD3-213ENST00000560175 TTTY13Q9BZ97 58 aa7.69□□□□□ -1.18
SMAD3-213ENST00000560175 ETDCA0A1B0GVM5 59 aa7.68□□□□□ -1.18
SMAD3-213ENST00000560175 ZNF815PA8K554 130 aa7.68□□□□□ -1.18
SMAD3-213ENST00000560175 AKR1D1P51857 326 aa7.68□□□□□ -1.18
SMAD3-213ENST00000560175 S100A12P80511 92 aa7.68□□□□□ -1.18
SMAD3-213ENST00000560175 ZNF706Q9Y5V0 76 aaPredicted RBP7.68□□□□□ -1.18
SMAD3-213ENST00000560175 LINC00483Q53H64 154 aa7.67□□□□□ -1.18
SMAD3-213ENST00000560175 ANKRD39Q53RE8 183 aa7.67□□□□□ -1.18
SMAD3-213ENST00000560175 HIST3H2BBQ8N257 126 aa7.67□□□□□ -1.18
SMAD3-213ENST00000560175 Q9BRP9 147 aa7.67□□□□□ -1.18
SMAD3-213ENST00000560175 PPDPFQ9H3Y8 114 aa7.67□□□□□ -1.18
SMAD3-213ENST00000560175 SPANXCQ9NY87 97 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms