RNA–Protein interactions for RNA: ENST00000560067.1

USP3-AS1-205, USP3 antisense RNA 1, humanhuman

TSL 3

Gene USP3-AS1, Length 366 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-205ENST00000560067 HIST1H2BDP58876 126 aa7.54□□□□□ -1.2
USP3-AS1-205ENST00000560067 HIST1H2BCP62807 126 aa7.54□□□□□ -1.2
USP3-AS1-205ENST00000560067 HIST2H2BEQ16778 126 aa7.54□□□□□ -1.2
USP3-AS1-205ENST00000560067 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.54□□□□□ -1.2
USP3-AS1-205ENST00000560067 HIST1H2BHQ93079 126 aa7.54□□□□□ -1.2
USP3-AS1-205ENST00000560067 LINC00167Q96N53 147 aa7.54□□□□□ -1.2
USP3-AS1-205ENST00000560067 HIST1H2BNQ99877 126 aa7.54□□□□□ -1.2
USP3-AS1-205ENST00000560067 HIST1H2BMQ99879 126 aa7.54□□□□□ -1.2
USP3-AS1-205ENST00000560067 MAP1LC3CQ9BXW4 147 aa7.54□□□□□ -1.2
USP3-AS1-205ENST00000560067 H0Y9J4 135 aa7.53□□□□□ -1.2
USP3-AS1-205ENST00000560067 ATP6V1G1O75348 118 aa7.53□□□□□ -1.2
USP3-AS1-205ENST00000560067 DPM2O94777 84 aa7.53□□□□□ -1.2
USP3-AS1-205ENST00000560067 RPL24P83731 157 aaKnown RBP7.53□□□□□ -1.2
USP3-AS1-205ENST00000560067 HERVK_113P61574 105 aa7.52□□□□□ -1.21
USP3-AS1-205ENST00000560067 HERV-K104P63124 156 aa7.52□□□□□ -1.21
USP3-AS1-205ENST00000560067 PMCHL2Q9BQD1 86 aa7.52□□□□□ -1.21
USP3-AS1-205ENST00000560067 NDUFA12Q9UI09 145 aa7.52□□□□□ -1.21
USP3-AS1-205ENST00000560067 A0A0U1RRA0 63 aa7.51□□□□□ -1.21
USP3-AS1-205ENST00000560067 MYMXA0A1B0GTQ4 84 aa7.51□□□□□ -1.21
USP3-AS1-205ENST00000560067 LINC00587B1AMM8 73 aa7.51□□□□□ -1.21
USP3-AS1-205ENST00000560067 ZNF861PO60384 105 aa7.51□□□□□ -1.21
USP3-AS1-205ENST00000560067 BCE1O60756 84 aa7.51□□□□□ -1.21
USP3-AS1-205ENST00000560067 IGKCP01834 107 aa7.51□□□□□ -1.21
USP3-AS1-205ENST00000560067 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
USP3-AS1-205ENST00000560067 MEIG1Q5JSS6 88 aa7.51□□□□□ -1.21
USP3-AS1-205ENST00000560067 PLEKHB2Q96CS7 222 aa7.51□□□□□ -1.21
USP3-AS1-205ENST00000560067 LEPROTO15243 131 aa7.5□□□□□ -1.21
USP3-AS1-205ENST00000560067 SMIM13P0DJ93 91 aa7.5□□□□□ -1.21
USP3-AS1-205ENST00000560067 VPREB1P12018 145 aa7.5□□□□□ -1.21
USP3-AS1-205ENST00000560067 RPL28P46779 137 aaKnown RBP7.49□□□□□ -1.21
USP3-AS1-205ENST00000560067 IGKV2-28A0A075B6P5 120 aa7.48□□□□□ -1.21
USP3-AS1-205ENST00000560067 J3QQQ9 107 aa7.48□□□□□ -1.21
USP3-AS1-205ENST00000560067 IGKV2D-28P01615 120 aa7.48□□□□□ -1.21
USP3-AS1-205ENST00000560067 IGLV1-50A0A075B6I6 118 aa7.47□□□□□ -1.21
USP3-AS1-205ENST00000560067 SYS1-DBNDD2H3BUS1 97 aa7.47□□□□□ -1.21
USP3-AS1-205ENST00000560067 LGALS3P17931 250 aaKnown RBP7.47□□□□□ -1.21
USP3-AS1-205ENST00000560067 UBE2AP49459 152 aa7.47□□□□□ -1.21
USP3-AS1-205ENST00000560067 TSPEAR-AS2P59090 65 aa7.47□□□□□ -1.21
USP3-AS1-205ENST00000560067 XP32Q5T750 250 aa7.47□□□□□ -1.21
USP3-AS1-205ENST00000560067 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
USP3-AS1-205ENST00000560067 NMUP48645 174 aa7.46□□□□□ -1.22
USP3-AS1-205ENST00000560067 BOD1L2Q8IYS8 172 aa7.46□□□□□ -1.22
USP3-AS1-205ENST00000560067 PRR26Q8N8Z3 221 aa7.46□□□□□ -1.22
USP3-AS1-205ENST00000560067 Q8NDZ9 215 aa7.46□□□□□ -1.22
USP3-AS1-205ENST00000560067 M0R378 163 aa7.45□□□□□ -1.22
USP3-AS1-205ENST00000560067 KRTAP1-4P0C5Y4 121 aa7.45□□□□□ -1.22
USP3-AS1-205ENST00000560067 COA6Q5JTJ3 125 aaKnown RBP7.45□□□□□ -1.22
USP3-AS1-205ENST00000560067 PET117Q6UWS5 81 aa7.45□□□□□ -1.22
USP3-AS1-205ENST00000560067 S100A1P23297 94 aa7.44□□□□□ -1.22
USP3-AS1-205ENST00000560067 TMEM238C9JI98 176 aa7.43□□□□□ -1.22
USP3-AS1-205ENST00000560067 E9PLD3 99 aa7.43□□□□□ -1.22
USP3-AS1-205ENST00000560067 LINC01545Q5VT33 79 aa7.43□□□□□ -1.22
USP3-AS1-205ENST00000560067 FAM19A1Q7Z5A9 133 aa7.43□□□□□ -1.22
USP3-AS1-205ENST00000560067 KRTAP4-8Q9BYQ9 185 aa7.43□□□□□ -1.22
USP3-AS1-205ENST00000560067 TMEM126AQ9H061 195 aa7.43□□□□□ -1.22
USP3-AS1-205ENST00000560067 HMCN2Q8NDA2 5059 aa7.43□□□□□ -1.22
USP3-AS1-205ENST00000560067 RPL13AP40429 203 aaKnown RBP7.42□□□□□ -1.22
USP3-AS1-205ENST00000560067 IGKV2D-26A0A0A0MRZ7 120 aa7.41□□□□□ -1.22
USP3-AS1-205ENST00000560067 NCR3O14931 201 aa7.41□□□□□ -1.22
USP3-AS1-205ENST00000560067 C3orf79P0CE67 100 aa7.41□□□□□ -1.22
USP3-AS1-205ENST00000560067 KRTDAPP60985 99 aa7.41□□□□□ -1.22
USP3-AS1-205ENST00000560067 KRTAP13-1Q8IUC0 172 aa7.41□□□□□ -1.22
USP3-AS1-205ENST00000560067 DAND5Q8N907 189 aa7.41□□□□□ -1.22
USP3-AS1-205ENST00000560067 PRLHP81277 87 aa7.4□□□□□ -1.22
USP3-AS1-205ENST00000560067 MIEN1Q9BRT3 115 aa7.4□□□□□ -1.22
USP3-AS1-205ENST00000560067 TNXBP22105 4242 aa7.4□□□□□ -1.22
USP3-AS1-205ENST00000560067 LOC107984156A0A0G2JMH3 177 aa7.39□□□□□ -1.23
USP3-AS1-205ENST00000560067 ARL17AQ8IVW1 177 aa7.39□□□□□ -1.23
USP3-AS1-205ENST00000560067 A0A0J9YXY3 114 aa7.38□□□□□ -1.23
USP3-AS1-205ENST00000560067 C20orf202A1L168 122 aa7.38□□□□□ -1.23
USP3-AS1-205ENST00000560067 S100A12P80511 92 aa7.38□□□□□ -1.23
USP3-AS1-205ENST00000560067 PRYO14603 147 aa7.37□□□□□ -1.23
USP3-AS1-205ENST00000560067 CRYGAP11844 174 aa7.37□□□□□ -1.23
USP3-AS1-205ENST00000560067 KCNQ1DNQ9H478 68 aa7.37□□□□□ -1.23
USP3-AS1-205ENST00000560067 TRBV10-3A0A0K0K1G6 114 aa7.36□□□□□ -1.23
USP3-AS1-205ENST00000560067 TRBV10-2A0A0K0K1G8 114 aa7.35□□□□□ -1.23
USP3-AS1-205ENST00000560067 ZNF815PA8K554 130 aa7.35□□□□□ -1.23
USP3-AS1-205ENST00000560067 ADAMTSL4-AS1Q5T5F5 129 aa7.35□□□□□ -1.23
USP3-AS1-205ENST00000560067 HIGD2AQ9BW72 106 aa7.35□□□□□ -1.23
USP3-AS1-205ENST00000560067 SPANXB1Q9NS25 103 aaPredicted RBP7.35□□□□□ -1.23
USP3-AS1-205ENST00000560067 ANAPC11Q9NYG5 84 aa7.35□□□□□ -1.23
USP3-AS1-205ENST00000560067 A0A087X002 238 aa7.34□□□□□ -1.23
USP3-AS1-205ENST00000560067 ETDCA0A1B0GVM5 59 aa7.34□□□□□ -1.23
USP3-AS1-205ENST00000560067 TIMM17BO60830 172 aa7.34□□□□□ -1.23
USP3-AS1-205ENST00000560067 NDUFC2O95298 119 aa7.34□□□□□ -1.23
USP3-AS1-205ENST00000560067 DDTP30046 118 aa7.34□□□□□ -1.23
USP3-AS1-205ENST00000560067 AKR1D1P51857 326 aa7.34□□□□□ -1.23
USP3-AS1-205ENST00000560067 NPC2P61916 151 aa7.34□□□□□ -1.23
USP3-AS1-205ENST00000560067 LINC00337Q8N6G1 96 aa7.34□□□□□ -1.23
USP3-AS1-205ENST00000560067 TYMSOSQ8TAI1 123 aa7.34□□□□□ -1.23
USP3-AS1-205ENST00000560067 S100A2P29034 98 aa7.33□□□□□ -1.24
USP3-AS1-205ENST00000560067 SPRR1AP35321 89 aa7.33□□□□□ -1.24
USP3-AS1-205ENST00000560067 FAM229BQ4G0N7 80 aa7.33□□□□□ -1.24
USP3-AS1-205ENST00000560067 S100A7L2Q5SY68 101 aa7.33□□□□□ -1.24
USP3-AS1-205ENST00000560067 SOSTDC1Q6X4U4 206 aa7.32□□□□□ -1.24
USP3-AS1-205ENST00000560067 TTTY13Q9BZ97 58 aa7.32□□□□□ -1.24
USP3-AS1-205ENST00000560067 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.31□□□□□ -1.24
USP3-AS1-205ENST00000560067 EIF4EBP3O60516 100 aaPredicted RBP7.31□□□□□ -1.24
USP3-AS1-205ENST00000560067 S100A6P06703 90 aa7.31□□□□□ -1.24
USP3-AS1-205ENST00000560067 ATOH7Q8N100 152 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms