RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 IGLV5-37A0A075B6J1 123 aa10.38□□□□□ -0.75
RPL28-209ENST00000560055 S100A6P06703 90 aa10.38□□□□□ -0.75
RPL28-209ENST00000560055 NMUP48645 174 aa10.38□□□□□ -0.75
RPL28-209ENST00000560055 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
RPL28-209ENST00000560055 LINC00158P58513 81 aa10.37□□□□□ -0.75
RPL28-209ENST00000560055 C20orf202A1L168 122 aa10.36□□□□□ -0.75
RPL28-209ENST00000560055 LINC00587B1AMM8 73 aa10.36□□□□□ -0.75
RPL28-209ENST00000560055 LGALS3P17931 250 aaKnown RBP10.36□□□□□ -0.75
RPL28-209ENST00000560055 S100A2P29034 98 aa10.36□□□□□ -0.75
RPL28-209ENST00000560055 MEIG1Q5JSS6 88 aa10.36□□□□□ -0.75
RPL28-209ENST00000560055 MRPL55Q7Z7F7 128 aaKnown RBP10.36□□□□□ -0.75
RPL28-209ENST00000560055 TNXBP22105 4242 aa10.36□□□□□ -0.75
RPL28-209ENST00000560055 A0A0U1RRA0 63 aa10.35□□□□□ -0.75
RPL28-209ENST00000560055 UBE2BP63146 152 aa10.35□□□□□ -0.75
RPL28-209ENST00000560055 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
RPL28-209ENST00000560055 LBHQ53QV2 105 aaPredicted RBP10.35□□□□□ -0.75
RPL28-209ENST00000560055 VPREB1P12018 145 aa10.34□□□□□ -0.75
RPL28-209ENST00000560055 SNRPEP62304 92 aaKnown RBP10.34□□□□□ -0.75
RPL28-209ENST00000560055 MIR7-3HGQ8N6C7 128 aa10.34□□□□□ -0.75
RPL28-209ENST00000560055 Q8NDZ9 215 aa10.34□□□□□ -0.75
RPL28-209ENST00000560055 C5orf52A6NGY3 159 aa10.33□□□□□ -0.76
RPL28-209ENST00000560055 C1orf137Q5JT78 98 aa10.33□□□□□ -0.76
RPL28-209ENST00000560055 IGKV2D-26A0A0A0MRZ7 120 aa10.32□□□□□ -0.76
RPL28-209ENST00000560055 J3QL48 77 aa10.32□□□□□ -0.76
RPL28-209ENST00000560055 LINC00167Q96N53 147 aa10.32□□□□□ -0.76
RPL28-209ENST00000560055 KRTAP29-1A8MX34 341 aaPredicted RBP10.31□□□□□ -0.76
RPL28-209ENST00000560055 AKR1D1P51857 326 aa10.31□□□□□ -0.76
RPL28-209ENST00000560055 RPL24P83731 157 aaKnown RBP10.31□□□□□ -0.76
RPL28-209ENST00000560055 SPINK6Q6UWN8 80 aa10.31□□□□□ -0.76
RPL28-209ENST00000560055 NKAPP1Q8N9T2 125 aa10.31□□□□□ -0.76
RPL28-209ENST00000560055 A0A0J9YXY3 114 aa10.3□□□□□ -0.76
RPL28-209ENST00000560055 IGLV7-43P04211 117 aa10.3□□□□□ -0.76
RPL28-209ENST00000560055 ATOH7Q8N100 152 aa10.3□□□□□ -0.76
RPL28-209ENST00000560055 LOC107984156A0A0G2JMH3 177 aa10.29□□□□□ -0.76
RPL28-209ENST00000560055 ANKRD39Q53RE8 183 aa10.29□□□□□ -0.76
RPL28-209ENST00000560055 ARL17AQ8IVW1 177 aa10.29□□□□□ -0.76
RPL28-209ENST00000560055 GAGE10A6NGK3 116 aa10.28□□□□□ -0.76
RPL28-209ENST00000560055 RPL37AP8A6NKH3 93 aa10.28□□□□□ -0.76
RPL28-209ENST00000560055 OXTP01178 125 aa10.28□□□□□ -0.76
RPL28-209ENST00000560055 DAND5Q8N907 189 aa10.28□□□□□ -0.76
RPL28-209ENST00000560055 TTTY13Q9BZ97 58 aa10.27□□□□□ -0.77
RPL28-209ENST00000560055 BOD1L2Q8IYS8 172 aa10.26□□□□□ -0.77
RPL28-209ENST00000560055 LITAFQ99732 161 aa10.26□□□□□ -0.77
RPL28-209ENST00000560055 IGLV1-50A0A075B6I6 118 aa10.25□□□□□ -0.77
RPL28-209ENST00000560055 ZNF815PA8K554 130 aa10.25□□□□□ -0.77
RPL28-209ENST00000560055 ADAMTSL4-AS1Q5T5F5 129 aa10.25□□□□□ -0.77
RPL28-209ENST00000560055 IGKV2-28A0A075B6P5 120 aa10.23□□□□□ -0.77
RPL28-209ENST00000560055 BCE1O60756 84 aa10.23□□□□□ -0.77
RPL28-209ENST00000560055 TIMM17BO60830 172 aa10.23□□□□□ -0.77
RPL28-209ENST00000560055 IGKV2D-28P01615 120 aa10.23□□□□□ -0.77
RPL28-209ENST00000560055 M0R378 163 aa10.22□□□□□ -0.77
RPL28-209ENST00000560055 SOSTDC1Q6X4U4 206 aa10.22□□□□□ -0.77
RPL28-209ENST00000560055 ZNF861PO60384 105 aa10.21□□□□□ -0.77
RPL28-209ENST00000560055 EIF4EBP3O60516 100 aaPredicted RBP10.21□□□□□ -0.77
RPL28-209ENST00000560055 H0Y9J4 135 aa10.2□□□□□ -0.78
RPL28-209ENST00000560055 REG3GQ6UW15 175 aa10.2□□□□□ -0.78
RPL28-209ENST00000560055 PCP2Q8IVA1 136 aa10.2□□□□□ -0.78
RPL28-209ENST00000560055 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
RPL28-209ENST00000560055 NCR3O14931 201 aa10.19□□□□□ -0.78
RPL28-209ENST00000560055 NDUFC2O95298 119 aa10.19□□□□□ -0.78
RPL28-209ENST00000560055 MT1HL1P0DM35 61 aa10.19□□□□□ -0.78
RPL28-209ENST00000560055 KRTAP13-1Q8IUC0 172 aa10.19□□□□□ -0.78
RPL28-209ENST00000560055 LINC01600Q96MT4 127 aa10.19□□□□□ -0.78
RPL28-209ENST00000560055 MIEN1Q9BRT3 115 aa10.19□□□□□ -0.78
RPL28-209ENST00000560055 TMEM126AQ9H061 195 aa10.19□□□□□ -0.78
RPL28-209ENST00000560055 TRBV10-2A0A0K0K1G8 114 aa10.18□□□□□ -0.78
RPL28-209ENST00000560055 TMEM238C9JI98 176 aa10.18□□□□□ -0.78
RPL28-209ENST00000560055 SCGB1D1O95968 90 aa10.17□□□□□ -0.78
RPL28-209ENST00000560055 NPC2P61916 151 aa10.17□□□□□ -0.78
RPL28-209ENST00000560055 LINC00308Q8TCZ7 52 aa10.17□□□□□ -0.78
RPL28-209ENST00000560055 SPANXB1Q9NS25 103 aaPredicted RBP10.17□□□□□ -0.78
RPL28-209ENST00000560055 HMCN2Q8NDA2 5059 aa10.17□□□□□ -0.78
RPL28-209ENST00000560055 HSBP1L1C9JCN9 74 aa10.16□□□□□ -0.78
RPL28-209ENST00000560055 RPL28P46779 137 aaKnown RBP10.16□□□□□ -0.78
RPL28-209ENST00000560055 SCGB1D4Q6XE38 83 aa10.15□□□□□ -0.78
RPL28-209ENST00000560055 SPANXDQ9BXN6 97 aa10.15□□□□□ -0.78
RPL28-209ENST00000560055 KCNQ1DNQ9H478 68 aa10.15□□□□□ -0.78
RPL28-209ENST00000560055 SPANXCQ9NY87 97 aa10.15□□□□□ -0.78
RPL28-209ENST00000560055 TRBV10-3A0A0K0K1G6 114 aa10.14□□□□□ -0.79
RPL28-209ENST00000560055 PRYO14603 147 aa10.14□□□□□ -0.79
RPL28-209ENST00000560055 KRTAP1-4P0C5Y4 121 aa10.13□□□□□ -0.79
RPL28-209ENST00000560055 SPRR1AP35321 89 aa10.13□□□□□ -0.79
RPL28-209ENST00000560055 IGLV6-57P01721 117 aa10.12□□□□□ -0.79
RPL28-209ENST00000560055 UBE2AP49459 152 aa10.12□□□□□ -0.79
RPL28-209ENST00000560055 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
RPL28-209ENST00000560055 PRLHP81277 87 aa10.11□□□□□ -0.79
RPL28-209ENST00000560055 JOSD1Q15040 202 aaPredicted RBP10.11□□□□□ -0.79
RPL28-209ENST00000560055 FAM19A1Q7Z5A9 133 aa10.11□□□□□ -0.79
RPL28-209ENST00000560055 PPDPFQ9H3Y8 114 aa10.11□□□□□ -0.79
RPL28-209ENST00000560055 TMA7Q9Y2S6 64 aaKnown RBP10.11□□□□□ -0.79
RPL28-209ENST00000560055 KRTAP4-16G5E9R7 235 aaPredicted RBP10.1□□□□□ -0.79
RPL28-209ENST00000560055 DDTP30046 118 aa10.1□□□□□ -0.79
RPL28-209ENST00000560055 Q6ZVH6 145 aa10.1□□□□□ -0.79
RPL28-209ENST00000560055 LINC00337Q8N6G1 96 aa10.1□□□□□ -0.79
RPL28-209ENST00000560055 IFITM1P13164 125 aa10.09□□□□□ -0.79
RPL28-209ENST00000560055 S100A7L2Q5SY68 101 aa10.07□□□□□ -0.8
RPL28-209ENST00000560055 COX8AP10176 69 aa10.06□□□□□ -0.8
RPL28-209ENST00000560055 COPS9Q8WXC6 57 aa10.06□□□□□ -0.8
RPL28-209ENST00000560055 S100A12P80511 92 aa10.05□□□□□ -0.8
RPL28-209ENST00000560055 TRAV23DV6A0A075B6W5 121 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms