RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 C9orf129Q5T035 196 aaKnown RBP6.68□□□□□ -1.34
TPM1-221ENST00000559831 SOSTDC1Q6X4U4 206 aa6.68□□□□□ -1.34
TPM1-221ENST00000559831 Q6ZVH6 145 aa6.68□□□□□ -1.34
TPM1-221ENST00000559831 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
TPM1-221ENST00000559831 IFITM1P13164 125 aa6.67□□□□□ -1.34
TPM1-221ENST00000559831 TAL2Q16559 108 aa6.67□□□□□ -1.34
TPM1-221ENST00000559831 COPS9Q8WXC6 57 aa6.67□□□□□ -1.34
TPM1-221ENST00000559831 DPH3Q96FX2 82 aa6.67□□□□□ -1.34
TPM1-221ENST00000559831 DNAH11Q96DT5 4516 aa6.66□□□□□ -1.34
TPM1-221ENST00000559831 KRTAP10-1P60331 282 aa6.66□□□□□ -1.34
TPM1-221ENST00000559831 CEND1Q8N111 149 aa6.66□□□□□ -1.34
TPM1-221ENST00000559831 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.66□□□□□ -1.34
TPM1-221ENST00000559831 FAM168BA1KXE4 195 aa6.65□□□□□ -1.34
TPM1-221ENST00000559831 PANO1I0J062 215 aa6.65□□□□□ -1.34
TPM1-221ENST00000559831 RPL24P83731 157 aaKnown RBP6.65□□□□□ -1.34
TPM1-221ENST00000559831 FAM19A5Q7Z5A7 132 aaPredicted RBP6.65□□□□□ -1.34
TPM1-221ENST00000559831 LINC00474Q9P2X8 69 aa6.65□□□□□ -1.34
TPM1-221ENST00000559831 PKD1P98161 4303 aa6.64□□□□□ -1.35
TPM1-221ENST00000559831 LOC107984156A0A0G2JMH3 177 aa6.64□□□□□ -1.35
TPM1-221ENST00000559831 A4D1N5 150 aa6.64□□□□□ -1.35
TPM1-221ENST00000559831 NCR3O14931 201 aa6.64□□□□□ -1.35
TPM1-221ENST00000559831 HINT1P49773 126 aaPredicted RBP6.64□□□□□ -1.35
TPM1-221ENST00000559831 SERTAD4-AS1Q5TG53 156 aa6.64□□□□□ -1.35
TPM1-221ENST00000559831 ARL17AQ8IVW1 177 aa6.64□□□□□ -1.35
TPM1-221ENST00000559831 SPACA4Q8TDM5 124 aa6.64□□□□□ -1.35
TPM1-221ENST00000559831 HECTD4Q9Y4D8 3996 aa6.64□□□□□ -1.35
TPM1-221ENST00000559831 A0A1W2PNN7 141 aa6.63□□□□□ -1.35
TPM1-221ENST00000559831 M0R143 59 aa6.63□□□□□ -1.35
TPM1-221ENST00000559831 FXYD2P54710 66 aa6.63□□□□□ -1.35
TPM1-221ENST00000559831 PRR3P79522 188 aaKnown RBP6.63□□□□□ -1.35
TPM1-221ENST00000559831 NKAPP1Q8N9T2 125 aa6.63□□□□□ -1.35
TPM1-221ENST00000559831 Q8NDZ9 215 aa6.63□□□□□ -1.35
TPM1-221ENST00000559831 DNAH5Q8TE73 4624 aa6.62□□□□□ -1.35
TPM1-221ENST00000559831 VPREB1P12018 145 aa6.62□□□□□ -1.35
TPM1-221ENST00000559831 BATFQ16520 125 aa6.62□□□□□ -1.35
TPM1-221ENST00000559831 FAM30AQ9NZY2 134 aa6.62□□□□□ -1.35
TPM1-221ENST00000559831 PLA2G2DQ9UNK4 145 aa6.62□□□□□ -1.35
TPM1-221ENST00000559831 TMEM238LA0A1B0GVL6 79 aa6.61□□□□□ -1.35
TPM1-221ENST00000559831 A6NJY4 79 aa6.61□□□□□ -1.35
TPM1-221ENST00000559831 NDUFC2O95298 119 aa6.61□□□□□ -1.35
TPM1-221ENST00000559831 BVES-AS1Q5T3Y7 98 aa6.61□□□□□ -1.35
TPM1-221ENST00000559831 PPDPFQ9H3Y8 114 aa6.61□□□□□ -1.35
TPM1-221ENST00000559831 A0A087WYN8 130 aa6.6□□□□□ -1.35
TPM1-221ENST00000559831 GAGE10A6NGK3 116 aa6.6□□□□□ -1.35
TPM1-221ENST00000559831 M0QXV9 152 aa6.6□□□□□ -1.35
TPM1-221ENST00000559831 HAMPP81172 84 aa6.6□□□□□ -1.35
TPM1-221ENST00000559831 KRTAP7-1Q8IUC3 87 aa6.6□□□□□ -1.35
TPM1-221ENST00000559831 OR13C6PQ8NH95 151 aa6.6□□□□□ -1.35
TPM1-221ENST00000559831 NHP2Q9NX24 153 aaKnown RBP6.6□□□□□ -1.35
TPM1-221ENST00000559831 C22orf24Q9Y442 160 aa6.6□□□□□ -1.35
TPM1-221ENST00000559831 IGLV5-37A0A075B6J1 123 aa6.59□□□□□ -1.35
TPM1-221ENST00000559831 IGKV2-28A0A075B6P5 120 aa6.59□□□□□ -1.35
TPM1-221ENST00000559831 M0R378 163 aa6.59□□□□□ -1.35
TPM1-221ENST00000559831 IGKV2D-28P01615 120 aa6.59□□□□□ -1.35
TPM1-221ENST00000559831 RAB37Q96AX2 223 aa6.59□□□□□ -1.35
TPM1-221ENST00000559831 A6NDN8 102 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 K7ERJ3 54 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 CFC1P0CG37 223 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 S100A7L2Q5SY68 101 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 Q6ZSA8 131 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 SCXQ7RTU7 201 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 PHF5AQ7RTV0 110 aaKnown RBP6.58□□□□□ -1.36
TPM1-221ENST00000559831 MRPL55Q7Z7F7 128 aaKnown RBP6.58□□□□□ -1.36
TPM1-221ENST00000559831 LINC00337Q8N6G1 96 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 C7orf33Q8WU49 177 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 PLAC8Q9NZF1 115 aa6.58□□□□□ -1.36
TPM1-221ENST00000559831 TRBV10-2A0A0K0K1G8 114 aa6.57□□□□□ -1.36
TPM1-221ENST00000559831 CIRBP-AS1Q8TBR5 109 aa6.57□□□□□ -1.36
TPM1-221ENST00000559831 LINC00167Q96N53 147 aa6.57□□□□□ -1.36
TPM1-221ENST00000559831 TRAV13-2A0A0B4J235 113 aa6.56□□□□□ -1.36
TPM1-221ENST00000559831 A0A0B4J2C4 111 aa6.56□□□□□ -1.36
TPM1-221ENST00000559831 TRBV10-3A0A0K0K1G6 114 aa6.56□□□□□ -1.36
TPM1-221ENST00000559831 RPL37AP8A6NKH3 93 aa6.56□□□□□ -1.36
TPM1-221ENST00000559831 H7C2G1 150 aa6.56□□□□□ -1.36
TPM1-221ENST00000559831 RPL13AP40429 203 aaKnown RBP6.56□□□□□ -1.36
TPM1-221ENST00000559831 UBE2BP63146 152 aa6.56□□□□□ -1.36
TPM1-221ENST00000559831 LBHQ53QV2 105 aaPredicted RBP6.56□□□□□ -1.36
TPM1-221ENST00000559831 DNAH8Q96JB1 4490 aa6.56□□□□□ -1.36
TPM1-221ENST00000559831 SNHG12Q9BXW3 62 aa6.55□□□□□ -1.36
TPM1-221ENST00000559831 EPPK1P58107 5090 aaKnown RBP6.54□□□□□ -1.36
TPM1-221ENST00000559831 A0A1B0GWB2 263 aa6.54□□□□□ -1.36
TPM1-221ENST00000559831 J3QL48 77 aa6.54□□□□□ -1.36
TPM1-221ENST00000559831 Q1RN00 199 aa6.54□□□□□ -1.36
TPM1-221ENST00000559831 PRO1854Q9UHT4 67 aa6.54□□□□□ -1.36
TPM1-221ENST00000559831 BIRC6Q9NR09 4857 aa6.53□□□□□ -1.36
TPM1-221ENST00000559831 EPM2AB3EWF7 344 aa6.53□□□□□ -1.36
TPM1-221ENST00000559831 IGLV6-57P01721 117 aa6.53□□□□□ -1.36
TPM1-221ENST00000559831 TMEM126AQ9H061 195 aa6.53□□□□□ -1.36
TPM1-221ENST00000559831 IGLV1-50A0A075B6I6 118 aa6.52□□□□□ -1.37
TPM1-221ENST00000559831 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
TPM1-221ENST00000559831 PKHD1P08F94 4074 aa6.52□□□□□ -1.37
TPM1-221ENST00000559831 DYNC1H1Q14204 4646 aaKnown RBP6.52□□□□□ -1.37
TPM1-221ENST00000559831 LRP1BQ9NZR2 4599 aa6.51□□□□□ -1.37
TPM1-221ENST00000559831 PRYO14603 147 aa6.51□□□□□ -1.37
TPM1-221ENST00000559831 XGP55808 180 aa6.51□□□□□ -1.37
TPM1-221ENST00000559831 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
TPM1-221ENST00000559831 SMIM11BQ8TCY0 68 aa6.51□□□□□ -1.37
TPM1-221ENST00000559831 TSPAN13O95857 204 aa6.5□□□□□ -1.37
TPM1-221ENST00000559831 CBY1Q9Y3M2 126 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms