RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 TP73-AS1Q9UF72 201 aa3.67□□□□□ -1.82
USP3-215ENST00000559771 CBY1Q9Y3M2 126 aa3.67□□□□□ -1.82
USP3-215ENST00000559771 IGLV4-69A0A075B6H9 119 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 IGLV4-60A0A075B6I1 120 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 IGLV10-54A0A075B6I4 117 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 A0A1W2PPM0 123 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 GAGE12HA6NDE8 117 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 K7ERU9 68 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 CRPP02741 224 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 CHTF8P0CG12 524 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 MRPS36P82909 103 aaKnown RBP3.66□□□□□ -1.82
USP3-215ENST00000559771 LYRM7Q5U5X0 104 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 Q6ZRU5 148 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 Q6ZVH6 145 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 PLEKHB2Q96CS7 222 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 AMELXQ99217 191 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 HIST1H4GQ99525 98 aa3.66□□□□□ -1.82
USP3-215ENST00000559771 A0A087WYN8 130 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 ZNF815PA8K554 130 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 H3BUT2 72 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 H7C423 109 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 LEPROTO15243 131 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 TRIAP1O43715 76 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 FXYD2P54710 66 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 REG3AQ06141 175 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 SCGB1D4Q6XE38 83 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 C15orf56Q8N910 161 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 SPACA4Q8TDM5 124 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 CSDC2Q9Y534 153 aaKnown RBP3.65□□□□□ -1.83
USP3-215ENST00000559771 SPCS1Q9Y6A9 102 aa3.65□□□□□ -1.83
USP3-215ENST00000559771 IGLV4-3A0A075B6K6 122 aa3.64□□□□□ -1.83
USP3-215ENST00000559771 A0A1B0GUV1 79 aa3.64□□□□□ -1.83
USP3-215ENST00000559771 TINCRA0A1B0GVN0 87 aa3.64□□□□□ -1.83
USP3-215ENST00000559771 TMEM223A0PJW6 202 aa3.64□□□□□ -1.83
USP3-215ENST00000559771 F8W1H4 67 aa3.64□□□□□ -1.83
USP3-215ENST00000559771 J3QQQ9 107 aa3.64□□□□□ -1.83
USP3-215ENST00000559771 LGALS3P17931 250 aaKnown RBP3.64□□□□□ -1.83
USP3-215ENST00000559771 RPL39P62891 51 aaKnown RBP3.64□□□□□ -1.83
USP3-215ENST00000559771 SRSF9Q13242 221 aaKnown RBP eCLIP3.64□□□□□ -1.83
USP3-215ENST00000559771 COTL1Q14019 142 aa3.64□□□□□ -1.83
USP3-215ENST00000559771 TMEM170BQ5T4T1 132 aa3.64□□□□□ -1.83
USP3-215ENST00000559771 NHP2Q9NX24 153 aaKnown RBP3.64□□□□□ -1.83
USP3-215ENST00000559771 PLAC8Q9NZF1 115 aa3.64□□□□□ -1.83
USP3-215ENST00000559771 TRBV20-1A0A075B6N2 111 aa3.63□□□□□ -1.83
USP3-215ENST00000559771 TRAV8-4A0A0B4J246 113 aa3.63□□□□□ -1.83
USP3-215ENST00000559771 TMEM238C9JI98 176 aa3.63□□□□□ -1.83
USP3-215ENST00000559771 UBE2D1P51668 147 aa3.63□□□□□ -1.83
USP3-215ENST00000559771 RPL24P83731 157 aaKnown RBP3.63□□□□□ -1.83
USP3-215ENST00000559771 OCIAD2Q56VL3 154 aa3.63□□□□□ -1.83
USP3-215ENST00000559771 FAM19A3Q7Z5A8 133 aa3.63□□□□□ -1.83
USP3-215ENST00000559771 COPS9Q8WXC6 57 aa3.63□□□□□ -1.83
USP3-215ENST00000559771 PPDPFQ9H3Y8 114 aa3.63□□□□□ -1.83
USP3-215ENST00000559771 UBE2D4Q9Y2X8 147 aa3.63□□□□□ -1.83
USP3-215ENST00000559771 IGHV3-64A0A075B6Q5 118 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 IGLV5-45A0A087WSX0 123 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.62□□□□□ -1.83
USP3-215ENST00000559771 IGHV1-58A0A0C4DH39 117 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 A0A0J9YXY3 114 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 J3QR89 54 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 TIMM17BO60830 172 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 ZNF22P17026 224 aaPredicted RBP3.62□□□□□ -1.83
USP3-215ENST00000559771 HERVK_113P63121 156 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 COX6A2Q02221 97 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 RAB37Q96AX2 223 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 LINC01600Q96MT4 127 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 TMEM243Q9BU79 118 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 TTTY13Q9BZ97 58 aa3.62□□□□□ -1.83
USP3-215ENST00000559771 A0A0B4J2C4 111 aa3.61□□□□□ -1.83
USP3-215ENST00000559771 IFITM1P13164 125 aa3.61□□□□□ -1.83
USP3-215ENST00000559771 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
USP3-215ENST00000559771 PRR3P79522 188 aaKnown RBP3.61□□□□□ -1.83
USP3-215ENST00000559771 Q8N9P0 234 aaPredicted RBP3.61□□□□□ -1.83
USP3-215ENST00000559771 GEMIN7Q9H840 131 aaKnown RBP3.61□□□□□ -1.83
USP3-215ENST00000559771 LPAP08519 4548 aa3.61□□□□□ -1.83
USP3-215ENST00000559771 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
USP3-215ENST00000559771 A0A096LNI7 61 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 A0A0J9YXV3 536 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 M0QXV9 152 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 FOXI1Q12951 378 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 HIGD2BQ4VC39 106 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 SFTA2Q6UW10 78 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 CHCHD10Q8WYQ3 142 aaPredicted RBP3.6□□□□□ -1.83
USP3-215ENST00000559771 FAM104AQ969W3 186 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 SPANXDQ9BXN6 97 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 SPANXCQ9NY87 97 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 PRO1854Q9UHT4 67 aa3.6□□□□□ -1.83
USP3-215ENST00000559771 GVQW2A0A096LPI5 108 aaPredicted RBP3.59□□□□□ -1.83
USP3-215ENST00000559771 IGKV2-24A0A0C4DH68 120 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 K7ERJ3 54 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 CFC1BP0CG36 223 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 CFC1P0CG37 223 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 TSPEAR-AS2P59090 65 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 HERV-K104P63124 156 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 LINC00526Q96FQ7 95 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 DPH3Q96FX2 82 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 TMEM101Q96IK0 257 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 OPRPNQ99935 248 aaPredicted RBP3.59□□□□□ -1.83
USP3-215ENST00000559771 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
USP3-215ENST00000559771 NDUFA12Q9UI09 145 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms