RNA–Protein interactions for RNA: ENST00000559289.1

SHC4-206, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-206ENST00000559289 CXCL5P42830 114 aa3.79□□□□□ -1.8
SHC4-206ENST00000559289 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.79□□□□□ -1.8
SHC4-206ENST00000559289 APOBP04114 4563 aaKnown RBP3.79□□□□□ -1.8
SHC4-206ENST00000559289 A0A096LNI7 61 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 C20orf202A1L168 122 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 J3QQQ9 107 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 TLX1NBP0CAT3 122 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 CKS1BP61024 79 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 CIRBPQ14011 172 aaKnown RBP3.78□□□□□ -1.8
SHC4-206ENST00000559289 Q6ZRP5 223 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 PLEKHB2Q96CS7 222 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 TTTY13Q9BZ97 58 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 V9GYY9 64 aa3.78□□□□□ -1.8
SHC4-206ENST00000559289 DDTP30046 118 aa3.77□□□□□ -1.81
SHC4-206ENST00000559289 XGP55808 180 aa3.77□□□□□ -1.81
SHC4-206ENST00000559289 HERVK_113P61574 105 aa3.77□□□□□ -1.81
SHC4-206ENST00000559289 HAMPP81172 84 aa3.77□□□□□ -1.81
SHC4-206ENST00000559289 SPACA4Q8TDM5 124 aa3.77□□□□□ -1.81
SHC4-206ENST00000559289 NDUFA12Q9UI09 145 aa3.77□□□□□ -1.81
SHC4-206ENST00000559289 LOC107984640A0A0U1RRK4 108 aa3.76□□□□□ -1.81
SHC4-206ENST00000559289 NDUFC2-KCTD14E9PQ53 114 aa3.76□□□□□ -1.81
SHC4-206ENST00000559289 C9orf129Q5T035 196 aaKnown RBP3.76□□□□□ -1.81
SHC4-206ENST00000559289 KRTAP7-1Q8IUC3 87 aa3.76□□□□□ -1.81
SHC4-206ENST00000559289 PAM16Q9Y3D7 125 aa3.76□□□□□ -1.81
SHC4-206ENST00000559289 HSPG2P98160 4391 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 IGKV2-24A0A0C4DH68 120 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 A0A0J9YXY3 114 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 MYMXA0A1B0GTQ4 84 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 A0A1W2PNN7 141 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 EPM2AB3EWF7 344 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 LGALS3P17931 250 aaKnown RBP3.75□□□□□ -1.81
SHC4-206ENST00000559289 PFN2P35080 140 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 NMUP48645 174 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 RPL18AQ02543 176 aaKnown RBP3.75□□□□□ -1.81
SHC4-206ENST00000559289 GAGE2BQ13066 116 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 GAGE2EQ4V326 116 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 GAGE2AQ6NT46 116 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 SFTA2Q6UW10 78 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 SCXQ7RTU7 201 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 PCP2Q8IVA1 136 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 CIRBP-AS1Q8TBR5 109 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 C14orf144Q96I85 54 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 VAMP8Q9BV40 100 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 GAGE2DQ9UEU5 116 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 TP73-AS1Q9UF72 201 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 ERG28Q9UKR5 140 aa3.75□□□□□ -1.81
SHC4-206ENST00000559289 A0A087WYN8 130 aa3.74□□□□□ -1.81
SHC4-206ENST00000559289 FAM168BA1KXE4 195 aa3.74□□□□□ -1.81
SHC4-206ENST00000559289 CDK2AP2O75956 126 aa3.74□□□□□ -1.81
SHC4-206ENST00000559289 SMIM13P0DJ93 91 aa3.74□□□□□ -1.81
SHC4-206ENST00000559289 RPL13AP40429 203 aaKnown RBP3.74□□□□□ -1.81
SHC4-206ENST00000559289 COX17Q14061 63 aa3.74□□□□□ -1.81
SHC4-206ENST00000559289 LCE4AQ5TA78 99 aa3.74□□□□□ -1.81
SHC4-206ENST00000559289 Q8NDZ9 215 aa3.74□□□□□ -1.81
SHC4-206ENST00000559289 LITAFQ99732 161 aa3.74□□□□□ -1.81
SHC4-206ENST00000559289 SPANXB1Q9NS25 103 aaPredicted RBP3.74□□□□□ -1.81
SHC4-206ENST00000559289 KIAA1109Q2LD37 5005 aa3.73□□□□□ -1.81
SHC4-206ENST00000559289 A0A1B0GV90 55 aa3.73□□□□□ -1.81
SHC4-206ENST00000559289 ZNF815PA8K554 130 aa3.73□□□□□ -1.81
SHC4-206ENST00000559289 B5MCH6 92 aa3.73□□□□□ -1.81
SHC4-206ENST00000559289 SPATA45Q537H7 98 aa3.73□□□□□ -1.81
SHC4-206ENST00000559289 ADAMTSL4-AS1Q5T5F5 129 aa3.73□□□□□ -1.81
SHC4-206ENST00000559289 SND1-IT1Q9HBX3 110 aa3.73□□□□□ -1.81
SHC4-206ENST00000559289 XAGE1AQ9HD64 81 aa3.73□□□□□ -1.81
SHC4-206ENST00000559289 PLAC8Q9NZF1 115 aa3.73□□□□□ -1.81
SHC4-206ENST00000559289 COX8AP10176 69 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 LINC00158P58513 81 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 MEIG1Q5JSS6 88 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 SOSTDC1Q6X4U4 206 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 MIR7-3HGQ8N6C7 128 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 DAND5Q8N907 189 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 MIEN1Q9BRT3 115 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 LINC00474Q9P2X8 69 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 PLA2G2DQ9UNK4 145 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 PKIGQ9Y2B9 76 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 BIRC6Q9NR09 4857 aa3.72□□□□□ -1.81
SHC4-206ENST00000559289 RYR1P21817 5038 aa3.71□□□□□ -1.82
SHC4-206ENST00000559289 LOC107984156A0A0G2JMH3 177 aa3.71□□□□□ -1.82
SHC4-206ENST00000559289 TIMM17BO60830 172 aa3.71□□□□□ -1.82
SHC4-206ENST00000559289 SMR3BP02814 79 aaPredicted RBP3.71□□□□□ -1.82
SHC4-206ENST00000559289 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
SHC4-206ENST00000559289 KRTAP11-1Q8IUC1 163 aa3.71□□□□□ -1.82
SHC4-206ENST00000559289 ARL17AQ8IVW1 177 aa3.71□□□□□ -1.82
SHC4-206ENST00000559289 FAT1Q14517 4588 aa3.71□□□□□ -1.82
SHC4-206ENST00000559289 IGLV5-37A0A075B6J1 123 aa3.7□□□□□ -1.82
SHC4-206ENST00000559289 M0R143 59 aa3.7□□□□□ -1.82
SHC4-206ENST00000559289 DLEU1O43261 78 aa3.7□□□□□ -1.82
SHC4-206ENST00000559289 HNRNPA3P51991 378 aaKnown RBP3.7□□□□□ -1.82
SHC4-206ENST00000559289 KRTAP10-4P60372 401 aaPredicted RBP3.7□□□□□ -1.82
SHC4-206ENST00000559289 BATFQ16520 125 aa3.7□□□□□ -1.82
SHC4-206ENST00000559289 PHF5AQ7RTV0 110 aaKnown RBP3.7□□□□□ -1.82
SHC4-206ENST00000559289 FAM19A5Q7Z5A7 132 aaPredicted RBP3.7□□□□□ -1.82
SHC4-206ENST00000559289 SPANXDQ9BXN6 97 aa3.7□□□□□ -1.82
SHC4-206ENST00000559289 SNHG12Q9BXW3 62 aa3.7□□□□□ -1.82
SHC4-206ENST00000559289 SPANXCQ9NY87 97 aa3.7□□□□□ -1.82
SHC4-206ENST00000559289 UQCR10Q9UDW1 63 aa3.7□□□□□ -1.82
SHC4-206ENST00000559289 C22orf24Q9Y442 160 aa3.7□□□□□ -1.82
SHC4-206ENST00000559289 NPC2P61916 151 aa3.69□□□□□ -1.82
SHC4-206ENST00000559289 PRR3P79522 188 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms