RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 TMEM126AQ9H061 195 aa10.48□□□□□ -0.73
TPM1-218ENST00000559281 FAM229BQ4G0N7 80 aa10.47□□□□□ -0.73
TPM1-218ENST00000559281 ANAPC11Q9NYG5 84 aa10.46□□□□□ -0.73
TPM1-218ENST00000559281 LINC00587B1AMM8 73 aa10.45□□□□□ -0.74
TPM1-218ENST00000559281 TMEM238C9JI98 176 aa10.45□□□□□ -0.74
TPM1-218ENST00000559281 PRLHP81277 87 aa10.45□□□□□ -0.74
TPM1-218ENST00000559281 RNF213Q63HN8 5207 aa10.45□□□□□ -0.74
TPM1-218ENST00000559281 A0A0U1RRA0 63 aa10.44□□□□□ -0.74
TPM1-218ENST00000559281 M0R378 163 aa10.44□□□□□ -0.74
TPM1-218ENST00000559281 HERV-K104P63124 156 aa10.44□□□□□ -0.74
TPM1-218ENST00000559281 IGKV2D-26A0A0A0MRZ7 120 aa10.43□□□□□ -0.74
TPM1-218ENST00000559281 MEIG1Q5JSS6 88 aa10.43□□□□□ -0.74
TPM1-218ENST00000559281 CBLN2Q8IUK8 224 aa10.43□□□□□ -0.74
TPM1-218ENST00000559281 FAM19A2Q8N3H0 131 aa10.43□□□□□ -0.74
TPM1-218ENST00000559281 Q8NDZ9 215 aa10.42□□□□□ -0.74
TPM1-218ENST00000559281 TRGC2P03986 189 aa10.41□□□□□ -0.74
TPM1-218ENST00000559281 SMIM13P0DJ93 91 aa10.41□□□□□ -0.74
TPM1-218ENST00000559281 KRTAP13-2Q52LG2 175 aa10.41□□□□□ -0.74
TPM1-218ENST00000559281 MYMXA0A1B0GTQ4 84 aa10.4□□□□□ -0.74
TPM1-218ENST00000559281 LEPROTL1O95214 131 aa10.4□□□□□ -0.74
TPM1-218ENST00000559281 PLEKHB2Q96CS7 222 aa10.4□□□□□ -0.74
TPM1-218ENST00000559281 MAP1LC3CQ9BXW4 147 aa10.4□□□□□ -0.74
TPM1-218ENST00000559281 NDUFA12Q9UI09 145 aa10.4□□□□□ -0.74
TPM1-218ENST00000559281 H0Y8G0 127 aa10.39□□□□□ -0.75
TPM1-218ENST00000559281 BOD1L2Q8IYS8 172 aa10.39□□□□□ -0.75
TPM1-218ENST00000559281 LINC00304Q8N9R0 145 aa10.39□□□□□ -0.75
TPM1-218ENST00000559281 HIGD2AQ9BW72 106 aa10.39□□□□□ -0.75
TPM1-218ENST00000559281 SLC7A5P1Q8MH63 180 aa10.38□□□□□ -0.75
TPM1-218ENST00000559281 MIR7-3HGQ8N6C7 128 aa10.38□□□□□ -0.75
TPM1-218ENST00000559281 CTAG1AP78358 180 aa10.37□□□□□ -0.75
TPM1-218ENST00000559281 HSPB8Q9UJY1 196 aa10.37□□□□□ -0.75
TPM1-218ENST00000559281 SERF1AO75920 110 aa10.36□□□□□ -0.75
TPM1-218ENST00000559281 PLNP26678 52 aa10.36□□□□□ -0.75
TPM1-218ENST00000559281 S100A12P80511 92 aa10.36□□□□□ -0.75
TPM1-218ENST00000559281 LPAP08519 4548 aa10.36□□□□□ -0.75
TPM1-218ENST00000559281 PRYO14603 147 aa10.35□□□□□ -0.75
TPM1-218ENST00000559281 ZNF706Q9Y5V0 76 aaPredicted RBP10.35□□□□□ -0.75
TPM1-218ENST00000559281 LEPROTO15243 131 aa10.34□□□□□ -0.75
TPM1-218ENST00000559281 NCR3O14931 201 aa10.33□□□□□ -0.76
TPM1-218ENST00000559281 HERVK_113P61574 105 aa10.33□□□□□ -0.76
TPM1-218ENST00000559281 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
TPM1-218ENST00000559281 DPM2O94777 84 aa10.32□□□□□ -0.76
TPM1-218ENST00000559281 FABP4P15090 132 aa10.32□□□□□ -0.76
TPM1-218ENST00000559281 LINC00337Q8N6G1 96 aa10.32□□□□□ -0.76
TPM1-218ENST00000559281 ETDCA0A1B0GVM5 59 aa10.31□□□□□ -0.76
TPM1-218ENST00000559281 SPRR4Q96PI1 79 aa10.31□□□□□ -0.76
TPM1-218ENST00000559281 J3QQQ9 107 aa10.3□□□□□ -0.76
TPM1-218ENST00000559281 SPRR1AP35321 89 aa10.3□□□□□ -0.76
TPM1-218ENST00000559281 NMUP48645 174 aa10.3□□□□□ -0.76
TPM1-218ENST00000559281 LINC00310P59036 64 aa10.3□□□□□ -0.76
TPM1-218ENST00000559281 SPAG11AQ6PDA7 123 aa10.3□□□□□ -0.76
TPM1-218ENST00000559281 IGKCP01834 107 aa10.29□□□□□ -0.76
TPM1-218ENST00000559281 LGALS3P17931 250 aaKnown RBP10.29□□□□□ -0.76
TPM1-218ENST00000559281 LOC107984156A0A0G2JMH3 177 aa10.28□□□□□ -0.76
TPM1-218ENST00000559281 TRBV10-3A0A0K0K1G6 114 aa10.28□□□□□ -0.76
TPM1-218ENST00000559281 TSPEAR-AS2P59090 65 aa10.28□□□□□ -0.76
TPM1-218ENST00000559281 ARL17AQ8IVW1 177 aa10.28□□□□□ -0.76
TPM1-218ENST00000559281 C3orf22Q8N5N4 141 aa10.28□□□□□ -0.76
TPM1-218ENST00000559281 MIEN1Q9BRT3 115 aa10.28□□□□□ -0.76
TPM1-218ENST00000559281 COLCA2A8K830 154 aa10.27□□□□□ -0.77
TPM1-218ENST00000559281 C4orf48Q5BLP8 95 aa10.27□□□□□ -0.77
TPM1-218ENST00000559281 SMCR5Q8TEV8 140 aa10.27□□□□□ -0.77
TPM1-218ENST00000559281 RETNLBQ9BQ08 111 aa10.27□□□□□ -0.77
TPM1-218ENST00000559281 TRBV10-2A0A0K0K1G8 114 aa10.26□□□□□ -0.77
TPM1-218ENST00000559281 DAND5Q8N907 189 aa10.26□□□□□ -0.77
TPM1-218ENST00000559281 PMCHL2Q9BQD1 86 aa10.26□□□□□ -0.77
TPM1-218ENST00000559281 KRTAP4-16G5E9R7 235 aaPredicted RBP10.25□□□□□ -0.77
TPM1-218ENST00000559281 DDTP30046 118 aa10.25□□□□□ -0.77
TPM1-218ENST00000559281 IGLV7-46A0A075B6I9 117 aa10.24□□□□□ -0.77
TPM1-218ENST00000559281 A0A0U1RQV1 116 aa10.23□□□□□ -0.77
TPM1-218ENST00000559281 SPANXB1Q9NS25 103 aaPredicted RBP10.23□□□□□ -0.77
TPM1-218ENST00000559281 NDUFC2O95298 119 aa10.22□□□□□ -0.77
TPM1-218ENST00000559281 S100A7L2Q5SY68 101 aa10.22□□□□□ -0.77
TPM1-218ENST00000559281 CDIP1Q9H305 208 aa10.22□□□□□ -0.77
TPM1-218ENST00000559281 B5MCH6 92 aa10.21□□□□□ -0.77
TPM1-218ENST00000559281 TPRXLQ17RH7 258 aa10.21□□□□□ -0.77
TPM1-218ENST00000559281 PPDPFQ9H3Y8 114 aa10.21□□□□□ -0.77
TPM1-218ENST00000559281 E9PLD3 99 aa10.19□□□□□ -0.78
TPM1-218ENST00000559281 GAGE2AQ6NT46 116 aa10.19□□□□□ -0.78
TPM1-218ENST00000559281 LINC00483Q53H64 154 aa10.18□□□□□ -0.78
TPM1-218ENST00000559281 Q8NBF4 154 aa10.18□□□□□ -0.78
TPM1-218ENST00000559281 A0A0J9YXY3 114 aa10.17□□□□□ -0.78
TPM1-218ENST00000559281 SYS1-DBNDD2H3BUS1 97 aa10.17□□□□□ -0.78
TPM1-218ENST00000559281 IGLV6-57P01721 117 aa10.17□□□□□ -0.78
TPM1-218ENST00000559281 JOSD1Q15040 202 aaPredicted RBP10.17□□□□□ -0.78
TPM1-218ENST00000559281 Q6ZRX8 168 aa10.17□□□□□ -0.78
TPM1-218ENST00000559281 CBY1Q9Y3M2 126 aa10.17□□□□□ -0.78
TPM1-218ENST00000559281 SPINK1P00995 79 aa10.16□□□□□ -0.78
TPM1-218ENST00000559281 FP248Q71RG6 208 aaPredicted RBP10.16□□□□□ -0.78
TPM1-218ENST00000559281 TRAV23DV6A0A075B6W5 121 aa10.14□□□□□ -0.79
TPM1-218ENST00000559281 HIST1H2BKO60814 126 aa10.14□□□□□ -0.79
TPM1-218ENST00000559281 ERC2-IT1O76042 136 aa10.14□□□□□ -0.79
TPM1-218ENST00000559281 HIST1H2BJP06899 126 aa10.14□□□□□ -0.79
TPM1-218ENST00000559281 HIST1H2BOP23527 126 aa10.14□□□□□ -0.79
TPM1-218ENST00000559281 HIST1H2BBP33778 126 aa10.14□□□□□ -0.79
TPM1-218ENST00000559281 HINT1P49773 126 aaPredicted RBP10.14□□□□□ -0.79
TPM1-218ENST00000559281 HIST1H2BDP58876 126 aa10.14□□□□□ -0.79
TPM1-218ENST00000559281 NPC2P61916 151 aa10.14□□□□□ -0.79
TPM1-218ENST00000559281 HIST1H2BCP62807 126 aa10.14□□□□□ -0.79
TPM1-218ENST00000559281 HIST2H2BEQ16778 126 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 204 ms