RNA–Protein interactions for RNA: ENST00000558952.1

CRNDE-205, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 4

Gene CRNDE, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-205ENST00000558952 A0A0U1RRA0 63 aa12.8□□□□□ -0.36
CRNDE-205ENST00000558952 MEIG1Q5JSS6 88 aa12.8□□□□□ -0.36
CRNDE-205ENST00000558952 HERV-K104P63124 156 aa12.78□□□□□ -0.36
CRNDE-205ENST00000558952 HSPB8Q9UJY1 196 aa12.78□□□□□ -0.36
CRNDE-205ENST00000558952 FAM19A1Q7Z5A9 133 aa12.77□□□□□ -0.37
CRNDE-205ENST00000558952 KRTAP13-1Q8IUC0 172 aa12.77□□□□□ -0.37
CRNDE-205ENST00000558952 TMEM126AQ9H061 195 aa12.77□□□□□ -0.37
CRNDE-205ENST00000558952 LINC00587B1AMM8 73 aa12.76□□□□□ -0.37
CRNDE-205ENST00000558952 SMIM13P0DJ93 91 aa12.76□□□□□ -0.37
CRNDE-205ENST00000558952 CRYGAP11844 174 aa12.76□□□□□ -0.37
CRNDE-205ENST00000558952 LINC00310P59036 64 aa12.76□□□□□ -0.37
CRNDE-205ENST00000558952 Q8NDZ9 215 aa12.76□□□□□ -0.37
CRNDE-205ENST00000558952 LRP2P98164 4655 aa12.75□□□□□ -0.37
CRNDE-205ENST00000558952 COLCA2A8K830 154 aa12.75□□□□□ -0.37
CRNDE-205ENST00000558952 TMEM238C9JI98 176 aa12.75□□□□□ -0.37
CRNDE-205ENST00000558952 PLNP26678 52 aa12.75□□□□□ -0.37
CRNDE-205ENST00000558952 NDUFA12Q9UI09 145 aa12.75□□□□□ -0.37
CRNDE-205ENST00000558952 MYMXA0A1B0GTQ4 84 aa12.74□□□□□ -0.37
CRNDE-205ENST00000558952 FABP4P15090 132 aa12.74□□□□□ -0.37
CRNDE-205ENST00000558952 PRLHP81277 87 aa12.74□□□□□ -0.37
CRNDE-205ENST00000558952 A0A087X002 238 aa12.73□□□□□ -0.37
CRNDE-205ENST00000558952 TYMSOSQ8TAI1 123 aa12.73□□□□□ -0.37
CRNDE-205ENST00000558952 MAP1LC3CQ9BXW4 147 aa12.73□□□□□ -0.37
CRNDE-205ENST00000558952 M0R378 163 aa12.72□□□□□ -0.37
CRNDE-205ENST00000558952 BOD1L2Q8IYS8 172 aa12.72□□□□□ -0.37
CRNDE-205ENST00000558952 MIR7-3HGQ8N6C7 128 aa12.72□□□□□ -0.37
CRNDE-205ENST00000558952 HERVK_113P61574 105 aa12.71□□□□□ -0.37
CRNDE-205ENST00000558952 LEPROTO15243 131 aa12.7□□□□□ -0.38
CRNDE-205ENST00000558952 DPM2O94777 84 aa12.7□□□□□ -0.38
CRNDE-205ENST00000558952 PLEKHB2Q96CS7 222 aa12.7□□□□□ -0.38
CRNDE-205ENST00000558952 ANAPC11Q9NYG5 84 aa12.69□□□□□ -0.38
CRNDE-205ENST00000558952 IGKCP01834 107 aa12.68□□□□□ -0.38
CRNDE-205ENST00000558952 FAM229BQ4G0N7 80 aa12.68□□□□□ -0.38
CRNDE-205ENST00000558952 PMCHL2Q9BQD1 86 aa12.67□□□□□ -0.38
CRNDE-205ENST00000558952 NCR3O14931 201 aa12.66□□□□□ -0.38
CRNDE-205ENST00000558952 TSPAN13O95857 204 aa12.66□□□□□ -0.38
CRNDE-205ENST00000558952 TSPEAR-AS2P59090 65 aa12.66□□□□□ -0.38
CRNDE-205ENST00000558952 PRR4Q16378 134 aa12.66□□□□□ -0.38
CRNDE-205ENST00000558952 IGKV2D-26A0A0A0MRZ7 120 aa12.65□□□□□ -0.38
CRNDE-205ENST00000558952 J3QQQ9 107 aa12.65□□□□□ -0.38
CRNDE-205ENST00000558952 LGALS3P17931 250 aaKnown RBP12.65□□□□□ -0.38
CRNDE-205ENST00000558952 HIGD2AQ9BW72 106 aa12.65□□□□□ -0.38
CRNDE-205ENST00000558952 PRYO14603 147 aa12.64□□□□□ -0.39
CRNDE-205ENST00000558952 NMUP48645 174 aa12.64□□□□□ -0.39
CRNDE-205ENST00000558952 S100A12P80511 92 aa12.62□□□□□ -0.39
CRNDE-205ENST00000558952 KRTAP13-2Q52LG2 175 aa12.62□□□□□ -0.39
CRNDE-205ENST00000558952 DAND5Q8N907 189 aa12.61□□□□□ -0.39
CRNDE-205ENST00000558952 HIST1H2BKO60814 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST1H2BJP06899 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST1H2BOP23527 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST1H2BBP33778 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST1H2BDP58876 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST1H2BCP62807 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST2H2BEQ16778 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST1H2BHQ93079 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST1H2BNQ99877 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 HIST1H2BMQ99879 126 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 MIEN1Q9BRT3 115 aa12.6□□□□□ -0.39
CRNDE-205ENST00000558952 KCNQ1DNQ9H478 68 aa12.59□□□□□ -0.39
CRNDE-205ENST00000558952 TRBV10-3A0A0K0K1G6 114 aa12.58□□□□□ -0.4
CRNDE-205ENST00000558952 ETDCA0A1B0GVM5 59 aa12.58□□□□□ -0.4
CRNDE-205ENST00000558952 LINC00337Q8N6G1 96 aa12.58□□□□□ -0.4
CRNDE-205ENST00000558952 LINC00304Q8N9R0 145 aa12.57□□□□□ -0.4
CRNDE-205ENST00000558952 ZNF706Q9Y5V0 76 aaPredicted RBP12.57□□□□□ -0.4
CRNDE-205ENST00000558952 LOC107984156A0A0G2JMH3 177 aa12.56□□□□□ -0.4
CRNDE-205ENST00000558952 SYS1-DBNDD2H3BUS1 97 aa12.56□□□□□ -0.4
CRNDE-205ENST00000558952 ARL17AQ8IVW1 177 aa12.56□□□□□ -0.4
CRNDE-205ENST00000558952 LPAP08519 4548 aa12.56□□□□□ -0.4
CRNDE-205ENST00000558952 SPRR1AP35321 89 aa12.55□□□□□ -0.4
CRNDE-205ENST00000558952 TRBV10-2A0A0K0K1G8 114 aa12.54□□□□□ -0.4
CRNDE-205ENST00000558952 E9PLD3 99 aa12.54□□□□□ -0.4
CRNDE-205ENST00000558952 SPRR4Q96PI1 79 aa12.54□□□□□ -0.4
CRNDE-205ENST00000558952 DDTP30046 118 aa12.53□□□□□ -0.4
CRNDE-205ENST00000558952 SPANXB1Q9NS25 103 aaPredicted RBP12.53□□□□□ -0.4
CRNDE-205ENST00000558952 RNF213Q63HN8 5207 aa12.52□□□□□ -0.41
CRNDE-205ENST00000558952 A0A0J9YXY3 114 aa12.5□□□□□ -0.41
CRNDE-205ENST00000558952 KRTAP4-16G5E9R7 235 aaPredicted RBP12.5□□□□□ -0.41
CRNDE-205ENST00000558952 NDUFC2O95298 119 aa12.5□□□□□ -0.41
CRNDE-205ENST00000558952 S100A7L2Q5SY68 101 aa12.5□□□□□ -0.41
CRNDE-205ENST00000558952 C3orf22Q8N5N4 141 aa12.5□□□□□ -0.41
CRNDE-205ENST00000558952 SMCR5Q8TEV8 140 aa12.5□□□□□ -0.41
CRNDE-205ENST00000558952 PET117Q6UWS5 81 aa12.49□□□□□ -0.41
CRNDE-205ENST00000558952 NPC2P61916 151 aa12.48□□□□□ -0.41
CRNDE-205ENST00000558952 LINC01545Q5VT33 79 aa12.48□□□□□ -0.41
CRNDE-205ENST00000558952 CTAG1AP78358 180 aa12.47□□□□□ -0.41
CRNDE-205ENST00000558952 B5MCH6 92 aa12.46□□□□□ -0.41
CRNDE-205ENST00000558952 ADAMTSL4-AS1Q5T5F5 129 aa12.45□□□□□ -0.42
CRNDE-205ENST00000558952 SOSTDC1Q6X4U4 206 aa12.44□□□□□ -0.42
CRNDE-205ENST00000558952 RETNLBQ9BQ08 111 aa12.44□□□□□ -0.42
CRNDE-205ENST00000558952 PPDPFQ9H3Y8 114 aa12.44□□□□□ -0.42
CRNDE-205ENST00000558952 IGLV6-57P01721 117 aa12.43□□□□□ -0.42
CRNDE-205ENST00000558952 SPAG11AQ6PDA7 123 aa12.43□□□□□ -0.42
CRNDE-205ENST00000558952 TRAV23DV6A0A075B6W5 121 aa12.42□□□□□ -0.42
CRNDE-205ENST00000558952 C3orf79P0CE67 100 aa12.42□□□□□ -0.42
CRNDE-205ENST00000558952 KRTDAPP60985 99 aa12.42□□□□□ -0.42
CRNDE-205ENST00000558952 C4orf48Q5BLP8 95 aa12.42□□□□□ -0.42
CRNDE-205ENST00000558952 ZNF815PA8K554 130 aa12.41□□□□□ -0.42
CRNDE-205ENST00000558952 COA6Q5JTJ3 125 aaKnown RBP12.41□□□□□ -0.42
CRNDE-205ENST00000558952 Q6ZRX8 168 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms