RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 MEIG1Q5JSS6 88 aa7.71□□□□□ -1.18
LRRC28-206ENST00000558471 HIST1H2BLQ99880 126 aa7.71□□□□□ -1.18
LRRC28-206ENST00000558471 SNRPEP62304 92 aaKnown RBP7.7□□□□□ -1.18
LRRC28-206ENST00000558471 UBE2BP63146 152 aa7.7□□□□□ -1.18
LRRC28-206ENST00000558471 TP73-AS1Q9UF72 201 aa7.7□□□□□ -1.18
LRRC28-206ENST00000558471 IGLV5-37A0A075B6J1 123 aa7.69□□□□□ -1.18
LRRC28-206ENST00000558471 NMUP48645 174 aa7.69□□□□□ -1.18
LRRC28-206ENST00000558471 LBHQ53QV2 105 aaPredicted RBP7.69□□□□□ -1.18
LRRC28-206ENST00000558471 C1orf137Q5JT78 98 aa7.69□□□□□ -1.18
LRRC28-206ENST00000558471 MRPL55Q7Z7F7 128 aaKnown RBP7.69□□□□□ -1.18
LRRC28-206ENST00000558471 C20orf202A1L168 122 aa7.68□□□□□ -1.18
LRRC28-206ENST00000558471 LINC00587B1AMM8 73 aa7.68□□□□□ -1.18
LRRC28-206ENST00000558471 SRSF9Q13242 221 aaKnown RBP eCLIP7.68□□□□□ -1.18
LRRC28-206ENST00000558471 MIR7-3HGQ8N6C7 128 aa7.68□□□□□ -1.18
LRRC28-206ENST00000558471 LINC00167Q96N53 147 aa7.68□□□□□ -1.18
LRRC28-206ENST00000558471 IGKV2D-26A0A0A0MRZ7 120 aa7.67□□□□□ -1.18
LRRC28-206ENST00000558471 C5orf52A6NGY3 159 aa7.67□□□□□ -1.18
LRRC28-206ENST00000558471 VPREB1P12018 145 aa7.67□□□□□ -1.18
LRRC28-206ENST00000558471 Q8NDZ9 215 aa7.67□□□□□ -1.18
LRRC28-206ENST00000558471 MYCBP2O75592 4640 aa7.67□□□□□ -1.18
LRRC28-206ENST00000558471 GAGE10A6NGK3 116 aa7.66□□□□□ -1.18
LRRC28-206ENST00000558471 RPL37AP8A6NKH3 93 aa7.66□□□□□ -1.18
LRRC28-206ENST00000558471 RPL24P83731 157 aaKnown RBP7.66□□□□□ -1.18
LRRC28-206ENST00000558471 SPINK6Q6UWN8 80 aa7.66□□□□□ -1.18
LRRC28-206ENST00000558471 ATOH7Q8N100 152 aa7.66□□□□□ -1.18
LRRC28-206ENST00000558471 NKAPP1Q8N9T2 125 aa7.66□□□□□ -1.18
LRRC28-206ENST00000558471 A0A0J9YXY3 114 aa7.65□□□□□ -1.18
LRRC28-206ENST00000558471 KRTAP29-1A8MX34 341 aaPredicted RBP7.65□□□□□ -1.18
LRRC28-206ENST00000558471 IGLV7-43P04211 117 aa7.65□□□□□ -1.18
LRRC28-206ENST00000558471 LRP1Q07954 4544 aaKnown RBP7.65□□□□□ -1.18
LRRC28-206ENST00000558471 DAND5Q8N907 189 aa7.65□□□□□ -1.18
LRRC28-206ENST00000558471 ANKRD39Q53RE8 183 aa7.64□□□□□ -1.19
LRRC28-206ENST00000558471 TTTY13Q9BZ97 58 aa7.64□□□□□ -1.19
LRRC28-206ENST00000558471 FAT3Q8TDW7 4589 aa7.63□□□□□ -1.19
LRRC28-206ENST00000558471 OXTP01178 125 aa7.63□□□□□ -1.19
LRRC28-206ENST00000558471 AKR1D1P51857 326 aa7.63□□□□□ -1.19
LRRC28-206ENST00000558471 BOD1L2Q8IYS8 172 aa7.63□□□□□ -1.19
LRRC28-206ENST00000558471 LOC107984156A0A0G2JMH3 177 aa7.62□□□□□ -1.19
LRRC28-206ENST00000558471 ZNF815PA8K554 130 aa7.62□□□□□ -1.19
LRRC28-206ENST00000558471 ADAMTSL4-AS1Q5T5F5 129 aa7.62□□□□□ -1.19
LRRC28-206ENST00000558471 ARL17AQ8IVW1 177 aa7.62□□□□□ -1.19
LRRC28-206ENST00000558471 IGLV1-50A0A075B6I6 118 aa7.61□□□□□ -1.19
LRRC28-206ENST00000558471 IGKV2-28A0A075B6P5 120 aa7.61□□□□□ -1.19
LRRC28-206ENST00000558471 IGKV2D-28P01615 120 aa7.61□□□□□ -1.19
LRRC28-206ENST00000558471 J3QL48 77 aa7.6□□□□□ -1.19
LRRC28-206ENST00000558471 M0R378 163 aa7.59□□□□□ -1.19
LRRC28-206ENST00000558471 EIF4EBP3O60516 100 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-206ENST00000558471 BCE1O60756 84 aa7.59□□□□□ -1.19
LRRC28-206ENST00000558471 NPC2P61916 151 aa7.59□□□□□ -1.19
LRRC28-206ENST00000558471 SOSTDC1Q6X4U4 206 aa7.59□□□□□ -1.19
LRRC28-206ENST00000558471 PCP2Q8IVA1 136 aa7.59□□□□□ -1.19
LRRC28-206ENST00000558471 LITAFQ99732 161 aa7.59□□□□□ -1.19
LRRC28-206ENST00000558471 NCR3O14931 201 aa7.58□□□□□ -1.2
LRRC28-206ENST00000558471 ZNF861PO60384 105 aa7.58□□□□□ -1.2
LRRC28-206ENST00000558471 TIMM17BO60830 172 aa7.58□□□□□ -1.2
LRRC28-206ENST00000558471 SCGB1D1O95968 90 aa7.58□□□□□ -1.2
LRRC28-206ENST00000558471 DIRC1Q969H9 104 aa7.58□□□□□ -1.2
LRRC28-206ENST00000558471 MIEN1Q9BRT3 115 aa7.58□□□□□ -1.2
LRRC28-206ENST00000558471 DMBT1Q9UGM3 2413 aaPredicted RBP7.58□□□□□ -1.2
LRRC28-206ENST00000558471 TMEM238C9JI98 176 aa7.57□□□□□ -1.2
LRRC28-206ENST00000558471 REG3GQ6UW15 175 aa7.57□□□□□ -1.2
LRRC28-206ENST00000558471 TMEM126AQ9H061 195 aa7.57□□□□□ -1.2
LRRC28-206ENST00000558471 H0Y9J4 135 aa7.56□□□□□ -1.2
LRRC28-206ENST00000558471 MT1HL1P0DM35 61 aa7.56□□□□□ -1.2
LRRC28-206ENST00000558471 LINC01600Q96MT4 127 aa7.56□□□□□ -1.2
LRRC28-206ENST00000558471 HSBP1L1C9JCN9 74 aa7.55□□□□□ -1.2
LRRC28-206ENST00000558471 NDUFC2O95298 119 aa7.55□□□□□ -1.2
LRRC28-206ENST00000558471 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
LRRC28-206ENST00000558471 LINC00308Q8TCZ7 52 aa7.55□□□□□ -1.2
LRRC28-206ENST00000558471 TRBV10-2A0A0K0K1G8 114 aa7.54□□□□□ -1.2
LRRC28-206ENST00000558471 RPL28P46779 137 aaKnown RBP7.54□□□□□ -1.2
LRRC28-206ENST00000558471 KRTAP13-1Q8IUC0 172 aa7.54□□□□□ -1.2
LRRC28-206ENST00000558471 TRBV10-3A0A0K0K1G6 114 aa7.53□□□□□ -1.2
LRRC28-206ENST00000558471 UBE2AP49459 152 aa7.53□□□□□ -1.2
LRRC28-206ENST00000558471 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
LRRC28-206ENST00000558471 KCNQ1DNQ9H478 68 aa7.53□□□□□ -1.2
LRRC28-206ENST00000558471 SPANXB1Q9NS25 103 aaPredicted RBP7.53□□□□□ -1.2
LRRC28-206ENST00000558471 TMA7Q9Y2S6 64 aaKnown RBP7.53□□□□□ -1.2
LRRC28-206ENST00000558471 PRLHP81277 87 aa7.52□□□□□ -1.21
LRRC28-206ENST00000558471 SPANXDQ9BXN6 97 aa7.52□□□□□ -1.21
LRRC28-206ENST00000558471 SPANXCQ9NY87 97 aa7.52□□□□□ -1.21
LRRC28-206ENST00000558471 PRYO14603 147 aa7.51□□□□□ -1.21
LRRC28-206ENST00000558471 KRTAP1-4P0C5Y4 121 aa7.51□□□□□ -1.21
LRRC28-206ENST00000558471 DDTP30046 118 aa7.51□□□□□ -1.21
LRRC28-206ENST00000558471 KRTAP10-8P60410 259 aa7.51□□□□□ -1.21
LRRC28-206ENST00000558471 SPRR1AP35321 89 aa7.5□□□□□ -1.21
LRRC28-206ENST00000558471 JOSD1Q15040 202 aaPredicted RBP7.5□□□□□ -1.21
LRRC28-206ENST00000558471 S100A7L2Q5SY68 101 aa7.5□□□□□ -1.21
LRRC28-206ENST00000558471 HERC1Q15751 4861 aa7.49□□□□□ -1.21
LRRC28-206ENST00000558471 TNXBP22105 4242 aa7.49□□□□□ -1.21
LRRC28-206ENST00000558471 IGLV6-57P01721 117 aa7.49□□□□□ -1.21
LRRC28-206ENST00000558471 KRTAP4-16G5E9R7 235 aaPredicted RBP7.48□□□□□ -1.21
LRRC28-206ENST00000558471 IFITM1P13164 125 aa7.48□□□□□ -1.21
LRRC28-206ENST00000558471 S100A12P80511 92 aa7.48□□□□□ -1.21
LRRC28-206ENST00000558471 Q6ZVH6 145 aa7.48□□□□□ -1.21
LRRC28-206ENST00000558471 MUSTN1Q8IVN3 82 aa7.48□□□□□ -1.21
LRRC28-206ENST00000558471 LINC00337Q8N6G1 96 aa7.48□□□□□ -1.21
LRRC28-206ENST00000558471 PRR26Q8N8Z3 221 aa7.48□□□□□ -1.21
LRRC28-206ENST00000558471 ETDCA0A1B0GVM5 59 aa7.46□□□□□ -1.22
LRRC28-206ENST00000558471 COX8AP10176 69 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms