RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 PCP2Q8IVA1 136 aa6.58□□□□□ -1.36
LRRC28-204ENST00000558172 VAMP8Q9BV40 100 aa6.58□□□□□ -1.36
LRRC28-204ENST00000558172 TTTY13Q9BZ97 58 aa6.58□□□□□ -1.36
LRRC28-204ENST00000558172 IGLV5-37A0A075B6J1 123 aa6.57□□□□□ -1.36
LRRC28-204ENST00000558172 LOC107984156A0A0G2JMH3 177 aa6.57□□□□□ -1.36
LRRC28-204ENST00000558172 LBHQ53QV2 105 aaPredicted RBP6.57□□□□□ -1.36
LRRC28-204ENST00000558172 SERTAD4-AS1Q5TG53 156 aa6.57□□□□□ -1.36
LRRC28-204ENST00000558172 ARL17AQ8IVW1 177 aa6.57□□□□□ -1.36
LRRC28-204ENST00000558172 LINC00528Q8N1L1 170 aa6.57□□□□□ -1.36
LRRC28-204ENST00000558172 Q8N1X5 172 aa6.57□□□□□ -1.36
LRRC28-204ENST00000558172 TP73-AS1Q9UF72 201 aa6.57□□□□□ -1.36
LRRC28-204ENST00000558172 HERC2O95714 4834 aa6.57□□□□□ -1.36
LRRC28-204ENST00000558172 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
LRRC28-204ENST00000558172 M0QXV9 152 aa6.56□□□□□ -1.36
LRRC28-204ENST00000558172 SPATA45Q537H7 98 aa6.56□□□□□ -1.36
LRRC28-204ENST00000558172 Q6ZVH6 145 aa6.56□□□□□ -1.36
LRRC28-204ENST00000558172 KRTAP7-1Q8IUC3 87 aa6.56□□□□□ -1.36
LRRC28-204ENST00000558172 NKAPP1Q8N9T2 125 aa6.56□□□□□ -1.36
LRRC28-204ENST00000558172 MIEN1Q9BRT3 115 aa6.56□□□□□ -1.36
LRRC28-204ENST00000558172 C22orf24Q9Y442 160 aa6.56□□□□□ -1.36
LRRC28-204ENST00000558172 DLEU1O43261 78 aa6.55□□□□□ -1.36
LRRC28-204ENST00000558172 PLA2G1BP04054 148 aaKnown RBP6.55□□□□□ -1.36
LRRC28-204ENST00000558172 COX8AP10176 69 aa6.55□□□□□ -1.36
LRRC28-204ENST00000558172 VPREB1P12018 145 aa6.55□□□□□ -1.36
LRRC28-204ENST00000558172 ADAMTSL4-AS1Q5T5F5 129 aa6.55□□□□□ -1.36
LRRC28-204ENST00000558172 PHF5AQ7RTV0 110 aaKnown RBP6.55□□□□□ -1.36
LRRC28-204ENST00000558172 BOD1L2Q8IYS8 172 aa6.55□□□□□ -1.36
LRRC28-204ENST00000558172 DAND5Q8N907 189 aa6.55□□□□□ -1.36
LRRC28-204ENST00000558172 COPS9Q8WXC6 57 aa6.55□□□□□ -1.36
LRRC28-204ENST00000558172 LITAFQ99732 161 aa6.55□□□□□ -1.36
LRRC28-204ENST00000558172 PAM16Q9Y3D7 125 aa6.55□□□□□ -1.36
LRRC28-204ENST00000558172 MRPL55Q7Z7F7 128 aaKnown RBP6.54□□□□□ -1.36
LRRC28-204ENST00000558172 SPANXDQ9BXN6 97 aa6.54□□□□□ -1.36
LRRC28-204ENST00000558172 SPANXCQ9NY87 97 aa6.54□□□□□ -1.36
LRRC28-204ENST00000558172 VPS13BQ7Z7G8 4022 aa6.53□□□□□ -1.36
LRRC28-204ENST00000558172 NDUFC2O95298 119 aa6.53□□□□□ -1.36
LRRC28-204ENST00000558172 IFITM1P13164 125 aa6.53□□□□□ -1.36
LRRC28-204ENST00000558172 RPL37AP61513 92 aaKnown RBP6.53□□□□□ -1.36
LRRC28-204ENST00000558172 UBE2BP63146 152 aa6.53□□□□□ -1.36
LRRC28-204ENST00000558172 S100A12P80511 92 aa6.53□□□□□ -1.36
LRRC28-204ENST00000558172 Q5VSD8 79 aa6.53□□□□□ -1.36
LRRC28-204ENST00000558172 LINC00308Q8TCZ7 52 aa6.53□□□□□ -1.36
LRRC28-204ENST00000558172 M0R378 163 aa6.52□□□□□ -1.37
LRRC28-204ENST00000558172 SLC25A34Q6PIV7 304 aa6.52□□□□□ -1.37
LRRC28-204ENST00000558172 LINC00167Q96N53 147 aa6.52□□□□□ -1.37
LRRC28-204ENST00000558172 PPDPFQ9H3Y8 114 aa6.52□□□□□ -1.37
LRRC28-204ENST00000558172 SPANXB1Q9NS25 103 aaPredicted RBP6.52□□□□□ -1.37
LRRC28-204ENST00000558172 NPC2P61916 151 aa6.51□□□□□ -1.37
LRRC28-204ENST00000558172 C14orf144Q96I85 54 aa6.51□□□□□ -1.37
LRRC28-204ENST00000558172 TRBV10-2A0A0K0K1G8 114 aa6.5□□□□□ -1.37
LRRC28-204ENST00000558172 SRSF9Q13242 221 aaKnown RBP eCLIP6.5□□□□□ -1.37
LRRC28-204ENST00000558172 SOSTDC1Q6X4U4 206 aa6.5□□□□□ -1.37
LRRC28-204ENST00000558172 Q8NDZ9 215 aa6.5□□□□□ -1.37
LRRC28-204ENST00000558172 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
LRRC28-204ENST00000558172 LOC105371267A0A1B0GV96 52 aa6.49□□□□□ -1.37
LRRC28-204ENST00000558172 GAGE10A6NGK3 116 aa6.49□□□□□ -1.37
LRRC28-204ENST00000558172 SMIM6P0DI80 62 aa6.49□□□□□ -1.37
LRRC28-204ENST00000558172 MUSTN1Q8IVN3 82 aa6.49□□□□□ -1.37
LRRC28-204ENST00000558172 LINC00518Q8N0U6 118 aa6.49□□□□□ -1.37
LRRC28-204ENST00000558172 KRTAP17-1Q9BYP8 105 aa6.49□□□□□ -1.37
LRRC28-204ENST00000558172 HIGD1BQ9P298 99 aa6.49□□□□□ -1.37
LRRC28-204ENST00000558172 IGLV1-50A0A075B6I6 118 aa6.48□□□□□ -1.37
LRRC28-204ENST00000558172 RPL37AP8A6NKH3 93 aa6.48□□□□□ -1.37
LRRC28-204ENST00000558172 EIF4EBP3O60516 100 aaPredicted RBP6.48□□□□□ -1.37
LRRC28-204ENST00000558172 PRR3P79522 188 aaKnown RBP6.48□□□□□ -1.37
LRRC28-204ENST00000558172 SRRM2Q9UQ35 2752 aaKnown RBP6.47□□□□□ -1.37
LRRC28-204ENST00000558172 NCR3O14931 201 aa6.47□□□□□ -1.37
LRRC28-204ENST00000558172 KRTAP10-4P60372 401 aaPredicted RBP6.47□□□□□ -1.37
LRRC28-204ENST00000558172 C1orf137Q5JT78 98 aa6.47□□□□□ -1.37
LRRC28-204ENST00000558172 KRTAP11-1Q8IUC1 163 aa6.47□□□□□ -1.37
LRRC28-204ENST00000558172 IGKV2-28A0A075B6P5 120 aa6.46□□□□□ -1.38
LRRC28-204ENST00000558172 IGKV2D-28P01615 120 aa6.46□□□□□ -1.38
LRRC28-204ENST00000558172 S100A7L2Q5SY68 101 aa6.46□□□□□ -1.38
LRRC28-204ENST00000558172 HIST1H4GQ99525 98 aa6.46□□□□□ -1.38
LRRC28-204ENST00000558172 CBY1Q9Y3M2 126 aa6.46□□□□□ -1.38
LRRC28-204ENST00000558172 DDTP30046 118 aa6.45□□□□□ -1.38
LRRC28-204ENST00000558172 TAL2Q16559 108 aa6.45□□□□□ -1.38
LRRC28-204ENST00000558172 REG3GQ6UW15 175 aa6.45□□□□□ -1.38
LRRC28-204ENST00000558172 UQCR10Q9UDW1 63 aa6.45□□□□□ -1.38
LRRC28-204ENST00000558172 TRBV10-3A0A0K0K1G6 114 aa6.44□□□□□ -1.38
LRRC28-204ENST00000558172 PRYO14603 147 aa6.44□□□□□ -1.38
LRRC28-204ENST00000558172 BCE1O60756 84 aa6.44□□□□□ -1.38
LRRC28-204ENST00000558172 IGLV6-57P01721 117 aa6.44□□□□□ -1.38
LRRC28-204ENST00000558172 IGLV7-43P04211 117 aa6.44□□□□□ -1.38
LRRC28-204ENST00000558172 C2orf91Q6ZV80 131 aa6.44□□□□□ -1.38
LRRC28-204ENST00000558172 TMEM126AQ9H061 195 aa6.44□□□□□ -1.38
LRRC28-204ENST00000558172 KCNQ1DNQ9H478 68 aa6.44□□□□□ -1.38
LRRC28-204ENST00000558172 PKHD1L1Q86WI1 4243 aa6.43□□□□□ -1.38
LRRC28-204ENST00000558172 INAFM2P0DMQ5 153 aa6.43□□□□□ -1.38
LRRC28-204ENST00000558172 SPINK6Q6UWN8 80 aa6.43□□□□□ -1.38
LRRC28-204ENST00000558172 OR13C6PQ8NH95 151 aa6.43□□□□□ -1.38
LRRC28-204ENST00000558172 KRTAP4-5Q9BYR2 181 aa6.43□□□□□ -1.38
LRRC28-204ENST00000558172 TRAV13-2A0A0B4J235 113 aa6.42□□□□□ -1.38
LRRC28-204ENST00000558172 A4D1N5 150 aa6.42□□□□□ -1.38
LRRC28-204ENST00000558172 TRAV23DV6A0A075B6W5 121 aa6.41□□□□□ -1.38
LRRC28-204ENST00000558172 ZNF861PO60384 105 aa6.41□□□□□ -1.38
LRRC28-204ENST00000558172 SPRR1AP35321 89 aa6.41□□□□□ -1.38
LRRC28-204ENST00000558172 RPL28P46779 137 aaKnown RBP6.41□□□□□ -1.38
LRRC28-204ENST00000558172 LINC00337Q8N6G1 96 aa6.41□□□□□ -1.38
LRRC28-204ENST00000558172 C12orf57Q99622 126 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms