RNA–Protein interactions for RNA: ENST00000558157.5

USP3-206, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,439 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-206ENST00000558157 BRK1Q8WUW1 75 aa7.57□□□□□ -1.2
USP3-206ENST00000558157 RMI2Q96E14 147 aa7.57□□□□□ -1.2
USP3-206ENST00000558157 TOMM7Q9P0U1 55 aa7.57□□□□□ -1.2
USP3-206ENST00000558157 VWFP04275 2813 aa7.56□□□□□ -1.2
USP3-206ENST00000558157 A0A087WZ39 114 aa7.56□□□□□ -1.2
USP3-206ENST00000558157 TRBV7-4A0A0J9YYF1 115 aa7.56□□□□□ -1.2
USP3-206ENST00000558157 IGLV1-51P01701 117 aa7.56□□□□□ -1.2
USP3-206ENST00000558157 SNURFQ9Y675 71 aa7.56□□□□□ -1.2
USP3-206ENST00000558157 IGHV3OR16-9A0A0B4J2B5 98 aa7.55□□□□□ -1.2
USP3-206ENST00000558157 ZNF561-AS1K7EIQ3 104 aa7.55□□□□□ -1.2
USP3-206ENST00000558157 INSP01308 110 aa7.55□□□□□ -1.2
USP3-206ENST00000558157 MIFP14174 115 aa7.55□□□□□ -1.2
USP3-206ENST00000558157 DEFB131AP59861 70 aa7.54□□□□□ -1.2
USP3-206ENST00000558157 MAP6D1Q9H9H5 199 aa7.54□□□□□ -1.2
USP3-206ENST00000558157 LAMTOR3Q9UHA4 124 aa7.54□□□□□ -1.2
USP3-206ENST00000558157 C6orf223Q8N319 242 aa7.54□□□□□ -1.2
USP3-206ENST00000558157 TRAV10A0A0B4J240 114 aa7.53□□□□□ -1.2
USP3-206ENST00000558157 Q6ZVQ6 151 aa7.53□□□□□ -1.2
USP3-206ENST00000558157 IL17DQ8TAD2 202 aa7.53□□□□□ -1.2
USP3-206ENST00000558157 C9orf66Q5T8R8 295 aa7.53□□□□□ -1.2
USP3-206ENST00000558157 LINC00474Q9P2X8 69 aa7.53□□□□□ -1.2
USP3-206ENST00000558157 NANOS2P60321 138 aaKnown RBP7.52□□□□□ -1.2
USP3-206ENST00000558157 ODF3L2Q3SX64 289 aa7.52□□□□□ -1.2
USP3-206ENST00000558157 Q6ZTI0 123 aa7.52□□□□□ -1.2
USP3-206ENST00000558157 PRM2P04554 102 aa7.52□□□□□ -1.21
USP3-206ENST00000558157 HAMPP81172 84 aa7.52□□□□□ -1.21
USP3-206ENST00000558157 SORL1Q92673 2214 aa7.52□□□□□ -1.21
USP3-206ENST00000558157 TRRAPQ9Y4A5 3859 aa7.52□□□□□ -1.21
USP3-206ENST00000558157 STAB1Q9NY15 2570 aa7.51□□□□□ -1.21
USP3-206ENST00000558157 CMYA5Q8N3K9 4069 aa7.51□□□□□ -1.21
USP3-206ENST00000558157 Q8N3U1 123 aa7.51□□□□□ -1.21
USP3-206ENST00000558157 ANK2Q01484 3957 aa7.5□□□□□ -1.21
USP3-206ENST00000558157 C6orf226Q5I0X4 101 aa7.5□□□□□ -1.21
USP3-206ENST00000558157 LINC00575Q6W349 94 aa7.5□□□□□ -1.21
USP3-206ENST00000558157 TMEM254Q8TBM7 123 aa7.5□□□□□ -1.21
USP3-206ENST00000558157 TRGV1A0A0A0MS02 117 aa7.49□□□□□ -1.21
USP3-206ENST00000558157 COX17Q14061 63 aa7.49□□□□□ -1.21
USP3-206ENST00000558157 WFDC10AQ9H1F0 79 aa7.49□□□□□ -1.21
USP3-206ENST00000558157 A0A0U1RQV1 116 aa7.49□□□□□ -1.21
USP3-206ENST00000558157 Q8IZM0 81 aa7.49□□□□□ -1.21
USP3-206ENST00000558157 COL6A5A8TX70 2615 aa7.48□□□□□ -1.21
USP3-206ENST00000558157 NREPQ16612 68 aa7.48□□□□□ -1.21
USP3-206ENST00000558157 ESRGQ1W209 222 aa7.48□□□□□ -1.21
USP3-206ENST00000558157 TM2D3Q9BRN9 247 aa7.48□□□□□ -1.21
USP3-206ENST00000558157 C19orf73Q9NVV2 129 aa7.48□□□□□ -1.21
USP3-206ENST00000558157 PLAC8L1A1L4L8 177 aa7.47□□□□□ -1.21
USP3-206ENST00000558157 PRR15Q8IV56 129 aa7.47□□□□□ -1.21
USP3-206ENST00000558157 C1orf158Q8N1D5 194 aa7.47□□□□□ -1.21
USP3-206ENST00000558157 STHQ8IWL8 128 aa7.47□□□□□ -1.21
USP3-206ENST00000558157 CMC4P56277 68 aaPredicted RBP7.46□□□□□ -1.22
USP3-206ENST00000558157 C11orf68Q9H3H3 251 aaKnown RBP7.46□□□□□ -1.22
USP3-206ENST00000558157 NOTCH3Q9UM47 2321 aa7.45□□□□□ -1.22
USP3-206ENST00000558157 BPY2O14599 106 aa7.45□□□□□ -1.22
USP3-206ENST00000558157 C6orf99Q4VX62 202 aa7.45□□□□□ -1.22
USP3-206ENST00000558157 PRYO14603 147 aa7.44□□□□□ -1.22
USP3-206ENST00000558157 MUC7Q8TAX7 377 aa7.44□□□□□ -1.22
USP3-206ENST00000558157 MDFIQ99750 246 aa7.44□□□□□ -1.22
USP3-206ENST00000558157 FUSP35637 526 aaKnown RBP eCLIP7.44□□□□□ -1.22
USP3-206ENST00000558157 IGLV4-60A0A075B6I1 120 aa7.43□□□□□ -1.22
USP3-206ENST00000558157 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
USP3-206ENST00000558157 LINC00959A0A1B0GUT2 108 aa7.43□□□□□ -1.22
USP3-206ENST00000558157 Q6ZRU5 148 aa7.43□□□□□ -1.22
USP3-206ENST00000558157 FAM229BQ4G0N7 80 aa7.43□□□□□ -1.22
USP3-206ENST00000558157 OXLD1Q5BKU9 147 aa7.43□□□□□ -1.22
USP3-206ENST00000558157 MPLKIPQ8TAP9 179 aa7.43□□□□□ -1.22
USP3-206ENST00000558157 IGKV3OR2-268A0A0C4DH90 116 aa7.42□□□□□ -1.22
USP3-206ENST00000558157 PMAIP1Q13794 54 aa7.42□□□□□ -1.22
USP3-206ENST00000558157 IGHV4-28A0A0C4DH34 117 aa7.41□□□□□ -1.22
USP3-206ENST00000558157 M0R2N4 97 aa7.41□□□□□ -1.22
USP3-206ENST00000558157 Q6ZTC4 211 aa7.41□□□□□ -1.22
USP3-206ENST00000558157 PKD1L1Q8TDX9 2849 aa7.41□□□□□ -1.22
USP3-206ENST00000558157 OCR1Q9BZK8 76 aa7.4□□□□□ -1.22
USP3-206ENST00000558157 DNAH3Q8TD57 4116 aa7.4□□□□□ -1.22
USP3-206ENST00000558157 GIG44P09565 113 aaPredicted RBP7.4□□□□□ -1.23
USP3-206ENST00000558157 KRTAP10-11P60412 298 aa7.4□□□□□ -1.23
USP3-206ENST00000558157 PRR3P79522 188 aaKnown RBP7.4□□□□□ -1.23
USP3-206ENST00000558157 Q1T7F1 81 aa7.39□□□□□ -1.23
USP3-206ENST00000558157 A0A1B0GUV1 79 aa7.38□□□□□ -1.23
USP3-206ENST00000558157 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.38□□□□□ -1.23
USP3-206ENST00000558157 EGFEM1PQ0D2K5 195 aa7.38□□□□□ -1.23
USP3-206ENST00000558157 C16orf74Q96GX8 76 aa7.38□□□□□ -1.23
USP3-206ENST00000558157 Q6ZQY7 126 aa7.37□□□□□ -1.23
USP3-206ENST00000558157 TRGV2A0A075B6R0 118 aa7.37□□□□□ -1.23
USP3-206ENST00000558157 IGLV6-57P01721 117 aa7.37□□□□□ -1.23
USP3-206ENST00000558157 NOP10Q9NPE3 64 aaKnown RBP7.37□□□□□ -1.23
USP3-206ENST00000558157 hDV103S1A0JD37 113 aa7.36□□□□□ -1.23
USP3-206ENST00000558157 COX7BP24311 80 aa7.36□□□□□ -1.23
USP3-206ENST00000558157 KIAA0087Q14695 138 aa7.36□□□□□ -1.23
USP3-206ENST00000558157 TRGV4A0A0C4DH28 118 aa7.36□□□□□ -1.23
USP3-206ENST00000558157 LOC100131303A0A0U1RQF7 123 aa7.36□□□□□ -1.23
USP3-206ENST00000558157 CSNK1G2-AS1Q8NCQ2 148 aa7.36□□□□□ -1.23
USP3-206ENST00000558157 IGHV4-30-4P0DP06 118 aa7.35□□□□□ -1.23
USP3-206ENST00000558157 IGKV4-1P06312 121 aa7.35□□□□□ -1.23
USP3-206ENST00000558157 CD164L2Q6UWJ8 174 aa7.34□□□□□ -1.23
USP3-206ENST00000558157 SCXQ7RTU7 201 aa7.34□□□□□ -1.23
USP3-206ENST00000558157 LCE6AA0A183 80 aa7.33□□□□□ -1.24
USP3-206ENST00000558157 APOC4P55056 127 aa7.32□□□□□ -1.24
USP3-206ENST00000558157 CD164Q04900 197 aa7.32□□□□□ -1.24
USP3-206ENST00000558157 DIRC1Q969H9 104 aa7.32□□□□□ -1.24
USP3-206ENST00000558157 DEFB135Q30KP9 77 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms