RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 Q6ZRP5 223 aa8□□□□□ -1.13
TPM1-209ENST00000558072 GAGE2DQ9UEU5 116 aa8□□□□□ -1.13
TPM1-209ENST00000558072 PLA2G2DQ9UNK4 145 aa8□□□□□ -1.13
TPM1-209ENST00000558072 CBY1Q9Y3M2 126 aa8□□□□□ -1.13
TPM1-209ENST00000558072 A0A1B0GVY2 172 aa7.99□□□□□ -1.13
TPM1-209ENST00000558072 LINC01620Q4KN68 170 aa7.99□□□□□ -1.13
TPM1-209ENST00000558072 CEND1Q8N111 149 aa7.99□□□□□ -1.13
TPM1-209ENST00000558072 MUSTN1Q8IVN3 82 aa7.98□□□□□ -1.13
TPM1-209ENST00000558072 DPH3Q96FX2 82 aa7.98□□□□□ -1.13
TPM1-209ENST00000558072 PKD1P98161 4303 aa7.98□□□□□ -1.13
TPM1-209ENST00000558072 CTAG1AP78358 180 aa7.97□□□□□ -1.13
TPM1-209ENST00000558072 DAND5Q8N907 189 aa7.97□□□□□ -1.13
TPM1-209ENST00000558072 TRBV10-2A0A0K0K1G8 114 aa7.96□□□□□ -1.14
TPM1-209ENST00000558072 TRAV13-2A0A0B4J235 113 aa7.95□□□□□ -1.14
TPM1-209ENST00000558072 A6NDN8 102 aa7.95□□□□□ -1.14
TPM1-209ENST00000558072 LBHQ53QV2 105 aaPredicted RBP7.95□□□□□ -1.14
TPM1-209ENST00000558072 NKAPP1Q8N9T2 125 aa7.95□□□□□ -1.14
TPM1-209ENST00000558072 XAGE1AQ9HD64 81 aa7.95□□□□□ -1.14
TPM1-209ENST00000558072 A0A096LNI7 61 aa7.94□□□□□ -1.14
TPM1-209ENST00000558072 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
TPM1-209ENST00000558072 NPC2P61916 151 aa7.94□□□□□ -1.14
TPM1-209ENST00000558072 EPPK1P58107 5090 aaKnown RBP7.93□□□□□ -1.14
TPM1-209ENST00000558072 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
TPM1-209ENST00000558072 IGLV5-37A0A075B6J1 123 aa7.93□□□□□ -1.14
TPM1-209ENST00000558072 M0R378 163 aa7.93□□□□□ -1.14
TPM1-209ENST00000558072 C9orf129Q5T035 196 aaKnown RBP7.93□□□□□ -1.14
TPM1-209ENST00000558072 SPACA4Q8TDM5 124 aa7.93□□□□□ -1.14
TPM1-209ENST00000558072 A4D1N5 150 aa7.92□□□□□ -1.14
TPM1-209ENST00000558072 SOSTDC1Q6X4U4 206 aa7.92□□□□□ -1.14
TPM1-209ENST00000558072 RAB37Q96AX2 223 aa7.92□□□□□ -1.14
TPM1-209ENST00000558072 HECTD4Q9Y4D8 3996 aa7.92□□□□□ -1.14
TPM1-209ENST00000558072 A0A0B4J2C4 111 aa7.91□□□□□ -1.14
TPM1-209ENST00000558072 PCP4L1A6NKN8 68 aa7.91□□□□□ -1.14
TPM1-209ENST00000558072 S100A7L2Q5SY68 101 aa7.91□□□□□ -1.14
TPM1-209ENST00000558072 BVES-AS1Q5T3Y7 98 aa7.91□□□□□ -1.14
TPM1-209ENST00000558072 TMEM126AQ9H061 195 aa7.91□□□□□ -1.14
TPM1-209ENST00000558072 DYNC1H1Q14204 4646 aaKnown RBP7.91□□□□□ -1.14
TPM1-209ENST00000558072 VPREB1P12018 145 aa7.9□□□□□ -1.14
TPM1-209ENST00000558072 HINT1P49773 126 aaPredicted RBP7.9□□□□□ -1.14
TPM1-209ENST00000558072 HAMPP81172 84 aa7.9□□□□□ -1.14
TPM1-209ENST00000558072 KRTAP10-1P60331 282 aa7.89□□□□□ -1.15
TPM1-209ENST00000558072 PLAC8Q9NZF1 115 aa7.89□□□□□ -1.15
TPM1-209ENST00000558072 FXYD2P54710 66 aa7.88□□□□□ -1.15
TPM1-209ENST00000558072 Q6ZSA8 131 aa7.88□□□□□ -1.15
TPM1-209ENST00000558072 FAM19A5Q7Z5A7 132 aaPredicted RBP7.88□□□□□ -1.15
TPM1-209ENST00000558072 MRPL55Q7Z7F7 128 aaKnown RBP7.88□□□□□ -1.15
TPM1-209ENST00000558072 OR13C6PQ8NH95 151 aa7.88□□□□□ -1.15
TPM1-209ENST00000558072 NHP2Q9NX24 153 aaKnown RBP7.88□□□□□ -1.15
TPM1-209ENST00000558072 PRO1854Q9UHT4 67 aa7.88□□□□□ -1.15
TPM1-209ENST00000558072 C22orf24Q9Y442 160 aa7.88□□□□□ -1.15
TPM1-209ENST00000558072 A0A087WYN8 130 aa7.87□□□□□ -1.15
TPM1-209ENST00000558072 A0A1B0GWB2 263 aa7.87□□□□□ -1.15
TPM1-209ENST00000558072 EPM2AB3EWF7 344 aa7.87□□□□□ -1.15
TPM1-209ENST00000558072 PANO1I0J062 215 aa7.87□□□□□ -1.15
TPM1-209ENST00000558072 M0QXV9 152 aa7.87□□□□□ -1.15
TPM1-209ENST00000558072 CHTF8P0CG12 524 aa7.87□□□□□ -1.15
TPM1-209ENST00000558072 CFC1BP0CG36 223 aa7.87□□□□□ -1.15
TPM1-209ENST00000558072 CFC1P0CG37 223 aa7.87□□□□□ -1.15
TPM1-209ENST00000558072 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.87□□□□□ -1.15
TPM1-209ENST00000558072 A0A1W2PNN7 141 aa7.85□□□□□ -1.15
TPM1-209ENST00000558072 NCR3O14931 201 aa7.85□□□□□ -1.15
TPM1-209ENST00000558072 EIF4EBP3O60516 100 aaPredicted RBP7.85□□□□□ -1.15
TPM1-209ENST00000558072 BATFQ16520 125 aa7.85□□□□□ -1.15
TPM1-209ENST00000558072 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
TPM1-209ENST00000558072 C7orf33Q8WU49 177 aa7.85□□□□□ -1.15
TPM1-209ENST00000558072 FAM30AQ9NZY2 134 aa7.85□□□□□ -1.15
TPM1-209ENST00000558072 PKHD1P08F94 4074 aa7.84□□□□□ -1.15
TPM1-209ENST00000558072 IGKV2-28A0A075B6P5 120 aa7.84□□□□□ -1.15
TPM1-209ENST00000558072 IGKV2D-28P01615 120 aa7.84□□□□□ -1.15
TPM1-209ENST00000558072 IGLV6-57P01721 117 aa7.84□□□□□ -1.15
TPM1-209ENST00000558072 UBE2BP63146 152 aa7.84□□□□□ -1.15
TPM1-209ENST00000558072 COL5A1-AS1Q5SY13 56 aa7.84□□□□□ -1.15
TPM1-209ENST00000558072 FAM168BA1KXE4 195 aa7.83□□□□□ -1.16
TPM1-209ENST00000558072 COX6CP09669 75 aa7.83□□□□□ -1.16
TPM1-209ENST00000558072 RPL13AP40429 203 aaKnown RBP7.83□□□□□ -1.16
TPM1-209ENST00000558072 VAMP3Q15836 100 aa7.83□□□□□ -1.16
TPM1-209ENST00000558072 Q1RN00 199 aa7.83□□□□□ -1.16
TPM1-209ENST00000558072 LINC00167Q96N53 147 aa7.83□□□□□ -1.16
TPM1-209ENST00000558072 IGLV1-50A0A075B6I6 118 aa7.82□□□□□ -1.16
TPM1-209ENST00000558072 PRYO14603 147 aa7.82□□□□□ -1.16
TPM1-209ENST00000558072 PRR3P79522 188 aaKnown RBP7.82□□□□□ -1.16
TPM1-209ENST00000558072 LINC00337Q8N6G1 96 aa7.82□□□□□ -1.16
TPM1-209ENST00000558072 KCNQ1DNQ9H478 68 aa7.82□□□□□ -1.16
TPM1-209ENST00000558072 LRP1BQ9NZR2 4599 aa7.82□□□□□ -1.16
TPM1-209ENST00000558072 DNAH8Q96JB1 4490 aa7.82□□□□□ -1.16
TPM1-209ENST00000558072 TRAV23DV6A0A075B6W5 121 aa7.81□□□□□ -1.16
TPM1-209ENST00000558072 TRBV10-3A0A0K0K1G6 114 aa7.81□□□□□ -1.16
TPM1-209ENST00000558072 SNCGO76070 127 aa7.81□□□□□ -1.16
TPM1-209ENST00000558072 LYRM7Q5U5X0 104 aa7.81□□□□□ -1.16
TPM1-209ENST00000558072 CIRBP-AS1Q8TBR5 109 aa7.81□□□□□ -1.16
TPM1-209ENST00000558072 SNHG12Q9BXW3 62 aa7.81□□□□□ -1.16
TPM1-209ENST00000558072 TRBV7-6A0A0J9YX20 115 aa7.8□□□□□ -1.16
TPM1-209ENST00000558072 RPL28P46779 137 aaKnown RBP7.8□□□□□ -1.16
TPM1-209ENST00000558072 SCXQ7RTU7 201 aa7.8□□□□□ -1.16
TPM1-209ENST00000558072 Q8NDZ9 215 aa7.8□□□□□ -1.16
TPM1-209ENST00000558072 GAGE10A6NGK3 116 aa7.79□□□□□ -1.16
TPM1-209ENST00000558072 PHF5AQ7RTV0 110 aaKnown RBP7.79□□□□□ -1.16
TPM1-209ENST00000558072 KRTAP7-1Q8IUC3 87 aa7.79□□□□□ -1.16
TPM1-209ENST00000558072 DIRC1Q969H9 104 aa7.79□□□□□ -1.16
TPM1-209ENST00000558072 BIRC6Q9NR09 4857 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms