RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 RPL24P83731 157 aaKnown RBP13.02□□□□□ -0.33
CRNDE-203ENST00000557792 IGKV2-28A0A075B6P5 120 aa13.01□□□□□ -0.33
CRNDE-203ENST00000557792 IGKV2D-28P01615 120 aa13.01□□□□□ -0.33
CRNDE-203ENST00000557792 RPL28P46779 137 aaKnown RBP13.01□□□□□ -0.33
CRNDE-203ENST00000557792 IGLV1-50A0A075B6I6 118 aa13□□□□□ -0.33
CRNDE-203ENST00000557792 SMIM13P0DJ93 91 aa13□□□□□ -0.33
CRNDE-203ENST00000557792 PMCHL2Q9BQD1 86 aa13□□□□□ -0.33
CRNDE-203ENST00000557792 PLNP26678 52 aa12.99□□□□□ -0.33
CRNDE-203ENST00000557792 NDUFA12Q9UI09 145 aa12.99□□□□□ -0.33
CRNDE-203ENST00000557792 HIST1H2BKO60814 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST1H2BJP06899 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST1H2BOP23527 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST1H2BBP33778 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST1H2BDP58876 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST1H2BCP62807 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HERV-K104P63124 156 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST2H2BEQ16778 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST1H2BHQ93079 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST1H2BNQ99877 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 HIST1H2BMQ99879 126 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 LPAP08519 4548 aa12.98□□□□□ -0.33
CRNDE-203ENST00000557792 DPM2O94777 84 aa12.97□□□□□ -0.33
CRNDE-203ENST00000557792 TSPEAR-AS2P59090 65 aa12.97□□□□□ -0.33
CRNDE-203ENST00000557792 MEIG1Q5JSS6 88 aa12.97□□□□□ -0.33
CRNDE-203ENST00000557792 KRTAP13-1Q8IUC0 172 aa12.97□□□□□ -0.33
CRNDE-203ENST00000557792 LEPROTO15243 131 aa12.96□□□□□ -0.33
CRNDE-203ENST00000557792 ATP6V1G1O75348 118 aa12.96□□□□□ -0.33
CRNDE-203ENST00000557792 MYMXA0A1B0GTQ4 84 aa12.95□□□□□ -0.34
CRNDE-203ENST00000557792 IGKCP01834 107 aa12.95□□□□□ -0.34
CRNDE-203ENST00000557792 MAP1LC3CQ9BXW4 147 aa12.95□□□□□ -0.34
CRNDE-203ENST00000557792 TMEM238C9JI98 176 aa12.94□□□□□ -0.34
CRNDE-203ENST00000557792 UBE2AP49459 152 aa12.94□□□□□ -0.34
CRNDE-203ENST00000557792 MIR7-3HGQ8N6C7 128 aa12.94□□□□□ -0.34
CRNDE-203ENST00000557792 PLEKHB2Q96CS7 222 aa12.94□□□□□ -0.34
CRNDE-203ENST00000557792 LINC00587B1AMM8 73 aa12.93□□□□□ -0.34
CRNDE-203ENST00000557792 TMEM126AQ9H061 195 aa12.93□□□□□ -0.34
CRNDE-203ENST00000557792 J3QQQ9 107 aa12.92□□□□□ -0.34
CRNDE-203ENST00000557792 M0R378 163 aa12.92□□□□□ -0.34
CRNDE-203ENST00000557792 RPL13AP40429 203 aaKnown RBP12.91□□□□□ -0.34
CRNDE-203ENST00000557792 BOD1L2Q8IYS8 172 aa12.91□□□□□ -0.34
CRNDE-203ENST00000557792 HERVK_113P61574 105 aa12.9□□□□□ -0.34
CRNDE-203ENST00000557792 PRLHP81277 87 aa12.89□□□□□ -0.35
CRNDE-203ENST00000557792 FAM19A1Q7Z5A9 133 aa12.89□□□□□ -0.35
CRNDE-203ENST00000557792 SYS1-DBNDD2H3BUS1 97 aa12.88□□□□□ -0.35
CRNDE-203ENST00000557792 ANAPC11Q9NYG5 84 aa12.88□□□□□ -0.35
CRNDE-203ENST00000557792 A0A087X002 238 aa12.87□□□□□ -0.35
CRNDE-203ENST00000557792 LGALS3P17931 250 aaKnown RBP12.86□□□□□ -0.35
CRNDE-203ENST00000557792 DAND5Q8N907 189 aa12.86□□□□□ -0.35
CRNDE-203ENST00000557792 NMUP48645 174 aa12.85□□□□□ -0.35
CRNDE-203ENST00000557792 NCR3O14931 201 aa12.84□□□□□ -0.35
CRNDE-203ENST00000557792 CRYGAP11844 174 aa12.84□□□□□ -0.35
CRNDE-203ENST00000557792 LOC107984156A0A0G2JMH3 177 aa12.83□□□□□ -0.36
CRNDE-203ENST00000557792 E9PLD3 99 aa12.83□□□□□ -0.36
CRNDE-203ENST00000557792 ARL17AQ8IVW1 177 aa12.83□□□□□ -0.36
CRNDE-203ENST00000557792 IGKV2D-26A0A0A0MRZ7 120 aa12.82□□□□□ -0.36
CRNDE-203ENST00000557792 COA6Q5JTJ3 125 aaKnown RBP12.82□□□□□ -0.36
CRNDE-203ENST00000557792 LINC01545Q5VT33 79 aa12.81□□□□□ -0.36
CRNDE-203ENST00000557792 PET117Q6UWS5 81 aa12.8□□□□□ -0.36
CRNDE-203ENST00000557792 KCNQ1DNQ9H478 68 aa12.8□□□□□ -0.36
CRNDE-203ENST00000557792 TYMSOSQ8TAI1 123 aa12.79□□□□□ -0.36
CRNDE-203ENST00000557792 A0A0J9YXY3 114 aa12.78□□□□□ -0.36
CRNDE-203ENST00000557792 TRBV10-3A0A0K0K1G6 114 aa12.78□□□□□ -0.36
CRNDE-203ENST00000557792 PRYO14603 147 aa12.78□□□□□ -0.36
CRNDE-203ENST00000557792 C3orf79P0CE67 100 aa12.78□□□□□ -0.36
CRNDE-203ENST00000557792 KRTAP13-2Q52LG2 175 aa12.78□□□□□ -0.36
CRNDE-203ENST00000557792 FAM229BQ4G0N7 80 aa12.77□□□□□ -0.37
CRNDE-203ENST00000557792 ADAMTSL4-AS1Q5T5F5 129 aa12.77□□□□□ -0.37
CRNDE-203ENST00000557792 HIGD2AQ9BW72 106 aa12.77□□□□□ -0.37
CRNDE-203ENST00000557792 SPRR1AP35321 89 aa12.76□□□□□ -0.37
CRNDE-203ENST00000557792 KRTAP4-16G5E9R7 235 aaPredicted RBP12.74□□□□□ -0.37
CRNDE-203ENST00000557792 EIF4EBP3O60516 100 aaPredicted RBP12.74□□□□□ -0.37
CRNDE-203ENST00000557792 LINC00337Q8N6G1 96 aa12.74□□□□□ -0.37
CRNDE-203ENST00000557792 MIEN1Q9BRT3 115 aa12.74□□□□□ -0.37
CRNDE-203ENST00000557792 TRBV10-2A0A0K0K1G8 114 aa12.73□□□□□ -0.37
CRNDE-203ENST00000557792 TSPAN13O95857 204 aa12.73□□□□□ -0.37
CRNDE-203ENST00000557792 KRTDAPP60985 99 aa12.73□□□□□ -0.37
CRNDE-203ENST00000557792 SOSTDC1Q6X4U4 206 aa12.73□□□□□ -0.37
CRNDE-203ENST00000557792 NDUFC2O95298 119 aa12.71□□□□□ -0.37
CRNDE-203ENST00000557792 DDTP30046 118 aa12.71□□□□□ -0.37
CRNDE-203ENST00000557792 NPC2P61916 151 aa12.71□□□□□ -0.37
CRNDE-203ENST00000557792 PRR4Q16378 134 aa12.71□□□□□ -0.37
CRNDE-203ENST00000557792 SPANXB1Q9NS25 103 aaPredicted RBP12.71□□□□□ -0.37
CRNDE-203ENST00000557792 ETDCA0A1B0GVM5 59 aa12.7□□□□□ -0.38
CRNDE-203ENST00000557792 SPRR4Q96PI1 79 aa12.69□□□□□ -0.38
CRNDE-203ENST00000557792 LITAFQ99732 161 aa12.69□□□□□ -0.38
CRNDE-203ENST00000557792 S100A12P80511 92 aa12.68□□□□□ -0.38
CRNDE-203ENST00000557792 SMCR5Q8TEV8 140 aa12.68□□□□□ -0.38
CRNDE-203ENST00000557792 TTTY13Q9BZ97 58 aa12.68□□□□□ -0.38
CRNDE-203ENST00000557792 ZNF815PA8K554 130 aa12.66□□□□□ -0.38
CRNDE-203ENST00000557792 B5MCH6 92 aa12.66□□□□□ -0.38
CRNDE-203ENST00000557792 IGLV6-57P01721 117 aa12.66□□□□□ -0.38
CRNDE-203ENST00000557792 S100A7L2Q5SY68 101 aa12.66□□□□□ -0.38
CRNDE-203ENST00000557792 TIMM17BO60830 172 aa12.65□□□□□ -0.38
CRNDE-203ENST00000557792 S100A1P23297 94 aa12.65□□□□□ -0.38
CRNDE-203ENST00000557792 C3orf22Q8N5N4 141 aa12.65□□□□□ -0.38
CRNDE-203ENST00000557792 LINC00308Q8TCZ7 52 aa12.64□□□□□ -0.39
CRNDE-203ENST00000557792 C20orf202A1L168 122 aa12.63□□□□□ -0.39
CRNDE-203ENST00000557792 LINC00304Q8N9R0 145 aa12.63□□□□□ -0.39
CRNDE-203ENST00000557792 ZNF706Q9Y5V0 76 aaPredicted RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms