RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 PPDPFQ9H3Y8 114 aa8.88□□□□□ -0.99
SUPT16H-208ENST00000557652 MIEN1Q9BRT3 115 aa8.87□□□□□ -0.99
SUPT16H-208ENST00000557652 DLEU1O43261 78 aa8.86□□□□□ -0.99
SUPT16H-208ENST00000557652 PLA2G1BP04054 148 aaKnown RBP8.86□□□□□ -0.99
SUPT16H-208ENST00000557652 PYY3Q5JQD4 70 aa8.86□□□□□ -0.99
SUPT16H-208ENST00000557652 RYR1P21817 5038 aa8.86□□□□□ -0.99
SUPT16H-208ENST00000557652 KIAA1109Q2LD37 5005 aa8.86□□□□□ -0.99
SUPT16H-208ENST00000557652 M0QXV9 152 aa8.85□□□□□ -0.99
SUPT16H-208ENST00000557652 FAM19A5Q7Z5A7 132 aaPredicted RBP8.85□□□□□ -0.99
SUPT16H-208ENST00000557652 PCP2Q8IVA1 136 aa8.85□□□□□ -0.99
SUPT16H-208ENST00000557652 LINC00528Q8N1L1 170 aa8.85□□□□□ -0.99
SUPT16H-208ENST00000557652 NKAPP1Q8N9T2 125 aa8.85□□□□□ -0.99
SUPT16H-208ENST00000557652 A0A0U1RRA0 63 aa8.84□□□□□ -0.99
SUPT16H-208ENST00000557652 NDUFC2O95298 119 aa8.84□□□□□ -0.99
SUPT16H-208ENST00000557652 COX8AP10176 69 aa8.84□□□□□ -0.99
SUPT16H-208ENST00000557652 IFITM1P13164 125 aa8.84□□□□□ -0.99
SUPT16H-208ENST00000557652 BOD1L2Q8IYS8 172 aa8.84□□□□□ -0.99
SUPT16H-208ENST00000557652 LITAFQ99732 161 aa8.84□□□□□ -0.99
SUPT16H-208ENST00000557652 SPANXDQ9BXN6 97 aa8.84□□□□□ -0.99
SUPT16H-208ENST00000557652 SPANXCQ9NY87 97 aa8.84□□□□□ -0.99
SUPT16H-208ENST00000557652 FAM168BA1KXE4 195 aa8.83□□□□□ -1
SUPT16H-208ENST00000557652 VPREB1P12018 145 aa8.83□□□□□ -1
SUPT16H-208ENST00000557652 HAMPP81172 84 aa8.83□□□□□ -1
SUPT16H-208ENST00000557652 SPATA45Q537H7 98 aa8.83□□□□□ -1
SUPT16H-208ENST00000557652 SERTAD4-AS1Q5TG53 156 aa8.83□□□□□ -1
SUPT16H-208ENST00000557652 MRPL55Q7Z7F7 128 aaKnown RBP8.83□□□□□ -1
SUPT16H-208ENST00000557652 TTTY13Q9BZ97 58 aa8.83□□□□□ -1
SUPT16H-208ENST00000557652 C22orf24Q9Y442 160 aa8.83□□□□□ -1
SUPT16H-208ENST00000557652 HSPG2P98160 4391 aa8.82□□□□□ -1
SUPT16H-208ENST00000557652 S100A12P80511 92 aa8.82□□□□□ -1
SUPT16H-208ENST00000557652 KRTAP7-1Q8IUC3 87 aa8.82□□□□□ -1
SUPT16H-208ENST00000557652 PAM16Q9Y3D7 125 aa8.82□□□□□ -1
SUPT16H-208ENST00000557652 TRBV10-2A0A0K0K1G8 114 aa8.81□□□□□ -1
SUPT16H-208ENST00000557652 SMR3BP02814 79 aaPredicted RBP8.81□□□□□ -1
SUPT16H-208ENST00000557652 ADAMTSL4-AS1Q5T5F5 129 aa8.81□□□□□ -1
SUPT16H-208ENST00000557652 SPANXB1Q9NS25 103 aaPredicted RBP8.81□□□□□ -1
SUPT16H-208ENST00000557652 M0R378 163 aa8.8□□□□□ -1
SUPT16H-208ENST00000557652 RPL37AP61513 92 aaKnown RBP8.8□□□□□ -1
SUPT16H-208ENST00000557652 UBE2BP63146 152 aa8.8□□□□□ -1
SUPT16H-208ENST00000557652 Q5VSD8 79 aa8.8□□□□□ -1
SUPT16H-208ENST00000557652 PHF5AQ7RTV0 110 aaKnown RBP8.8□□□□□ -1
SUPT16H-208ENST00000557652 LINC00308Q8TCZ7 52 aa8.8□□□□□ -1
SUPT16H-208ENST00000557652 SMIM6P0DI80 62 aa8.79□□□□□ -1
SUPT16H-208ENST00000557652 SLC25A34Q6PIV7 304 aa8.79□□□□□ -1
SUPT16H-208ENST00000557652 DAND5Q8N907 189 aa8.79□□□□□ -1
SUPT16H-208ENST00000557652 CBY1Q9Y3M2 126 aa8.79□□□□□ -1
SUPT16H-208ENST00000557652 LINC00518Q8N0U6 118 aa8.78□□□□□ -1
SUPT16H-208ENST00000557652 HIGD1BQ9P298 99 aa8.78□□□□□ -1
SUPT16H-208ENST00000557652 LINC00167Q96N53 147 aa8.77□□□□□ -1.01
SUPT16H-208ENST00000557652 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
SUPT16H-208ENST00000557652 SRSF9Q13242 221 aaKnown RBP eCLIP8.76□□□□□ -1.01
SUPT16H-208ENST00000557652 IGLV1-50A0A075B6I6 118 aa8.75□□□□□ -1.01
SUPT16H-208ENST00000557652 SOSTDC1Q6X4U4 206 aa8.75□□□□□ -1.01
SUPT16H-208ENST00000557652 C14orf144Q96I85 54 aa8.75□□□□□ -1.01
SUPT16H-208ENST00000557652 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
SUPT16H-208ENST00000557652 VPS13BQ7Z7G8 4022 aa8.73□□□□□ -1.01
SUPT16H-208ENST00000557652 KRTAP10-4P60372 401 aaPredicted RBP8.73□□□□□ -1.01
SUPT16H-208ENST00000557652 TAL2Q16559 108 aa8.73□□□□□ -1.01
SUPT16H-208ENST00000557652 Q8NDZ9 215 aa8.73□□□□□ -1.01
SUPT16H-208ENST00000557652 HERC2O95714 4834 aa8.73□□□□□ -1.01
SUPT16H-208ENST00000557652 LOC105371267A0A1B0GV96 52 aa8.72□□□□□ -1.01
SUPT16H-208ENST00000557652 PRYO14603 147 aa8.72□□□□□ -1.01
SUPT16H-208ENST00000557652 NPC2P61916 151 aa8.71□□□□□ -1.02
SUPT16H-208ENST00000557652 C1orf137Q5JT78 98 aa8.71□□□□□ -1.02
SUPT16H-208ENST00000557652 S100A7L2Q5SY68 101 aa8.71□□□□□ -1.02
SUPT16H-208ENST00000557652 MUSTN1Q8IVN3 82 aa8.71□□□□□ -1.02
SUPT16H-208ENST00000557652 HIST1H4GQ99525 98 aa8.71□□□□□ -1.02
SUPT16H-208ENST00000557652 TMEM126AQ9H061 195 aa8.71□□□□□ -1.02
SUPT16H-208ENST00000557652 KCNQ1DNQ9H478 68 aa8.71□□□□□ -1.02
SUPT16H-208ENST00000557652 UQCR10Q9UDW1 63 aa8.71□□□□□ -1.02
SUPT16H-208ENST00000557652 GAGE10A6NGK3 116 aa8.7□□□□□ -1.02
SUPT16H-208ENST00000557652 RPL37AP8A6NKH3 93 aa8.7□□□□□ -1.02
SUPT16H-208ENST00000557652 NCR3O14931 201 aa8.7□□□□□ -1.02
SUPT16H-208ENST00000557652 EIF4EBP3O60516 100 aaPredicted RBP8.7□□□□□ -1.02
SUPT16H-208ENST00000557652 BCE1O60756 84 aa8.7□□□□□ -1.02
SUPT16H-208ENST00000557652 IGLV6-57P01721 117 aa8.7□□□□□ -1.02
SUPT16H-208ENST00000557652 DDTP30046 118 aa8.7□□□□□ -1.02
SUPT16H-208ENST00000557652 REG3GQ6UW15 175 aa8.7□□□□□ -1.02
SUPT16H-208ENST00000557652 SRRM2Q9UQ35 2752 aaKnown RBP8.69□□□□□ -1.02
SUPT16H-208ENST00000557652 IGKV2-28A0A075B6P5 120 aa8.69□□□□□ -1.02
SUPT16H-208ENST00000557652 IGKV2D-28P01615 120 aa8.69□□□□□ -1.02
SUPT16H-208ENST00000557652 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
SUPT16H-208ENST00000557652 SPINK6Q6UWN8 80 aa8.69□□□□□ -1.02
SUPT16H-208ENST00000557652 FAT1Q14517 4588 aa8.69□□□□□ -1.02
SUPT16H-208ENST00000557652 TRAV13-2A0A0B4J235 113 aa8.68□□□□□ -1.02
SUPT16H-208ENST00000557652 TRBV10-3A0A0K0K1G6 114 aa8.68□□□□□ -1.02
SUPT16H-208ENST00000557652 LCE2BO14633 110 aa8.68□□□□□ -1.02
SUPT16H-208ENST00000557652 C2orf91Q6ZV80 131 aa8.68□□□□□ -1.02
SUPT16H-208ENST00000557652 KRTAP11-1Q8IUC1 163 aa8.68□□□□□ -1.02
SUPT16H-208ENST00000557652 H0Y9J4 135 aa8.67□□□□□ -1.02
SUPT16H-208ENST00000557652 SPRR1AP35321 89 aa8.67□□□□□ -1.02
SUPT16H-208ENST00000557652 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
SUPT16H-208ENST00000557652 LINC00337Q8N6G1 96 aa8.67□□□□□ -1.02
SUPT16H-208ENST00000557652 KRTAP17-1Q9BYP8 105 aa8.67□□□□□ -1.02
SUPT16H-208ENST00000557652 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
SUPT16H-208ENST00000557652 A6NJY4 79 aa8.66□□□□□ -1.02
SUPT16H-208ENST00000557652 ZNF861PO60384 105 aa8.66□□□□□ -1.02
SUPT16H-208ENST00000557652 INAFM2P0DMQ5 153 aa8.65□□□□□ -1.02
SUPT16H-208ENST00000557652 DIRC1Q969H9 104 aa8.65□□□□□ -1.02
SUPT16H-208ENST00000557652 TRAV23DV6A0A075B6W5 121 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms