RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 S100A1P23297 94 aa7.72□□□□□ -1.17
SLIRP-211ENST00000557623 PLNP26678 52 aa7.72□□□□□ -1.17
SLIRP-211ENST00000557623 UBE2BP63146 152 aa7.72□□□□□ -1.17
SLIRP-211ENST00000557623 LBHQ53QV2 105 aaPredicted RBP7.72□□□□□ -1.17
SLIRP-211ENST00000557623 MAP1LC3CQ9BXW4 147 aa7.72□□□□□ -1.17
SLIRP-211ENST00000557623 ERG28Q9UKR5 140 aa7.72□□□□□ -1.17
SLIRP-211ENST00000557623 PFN2P35080 140 aa7.71□□□□□ -1.18
SLIRP-211ENST00000557623 C1orf137Q5JT78 98 aa7.71□□□□□ -1.18
SLIRP-211ENST00000557623 TP73-AS1Q9UF72 201 aa7.71□□□□□ -1.18
SLIRP-211ENST00000557623 C22orf24Q9Y442 160 aa7.71□□□□□ -1.18
SLIRP-211ENST00000557623 DPM2O94777 84 aa7.7□□□□□ -1.18
SLIRP-211ENST00000557623 SERTAD4-AS1Q5TG53 156 aa7.7□□□□□ -1.18
SLIRP-211ENST00000557623 ZNF625Q96I27 306 aaPredicted RBP7.7□□□□□ -1.18
SLIRP-211ENST00000557623 SRSF9Q13242 221 aaKnown RBP eCLIP7.69□□□□□ -1.18
SLIRP-211ENST00000557623 PKHD1L1Q86WI1 4243 aa7.68□□□□□ -1.18
SLIRP-211ENST00000557623 IGKCP01834 107 aa7.68□□□□□ -1.18
SLIRP-211ENST00000557623 HERVK_113P61574 105 aa7.68□□□□□ -1.18
SLIRP-211ENST00000557623 HERV-K104P63124 156 aa7.68□□□□□ -1.18
SLIRP-211ENST00000557623 REG3GQ6UW15 175 aa7.68□□□□□ -1.18
SLIRP-211ENST00000557623 MRPL55Q7Z7F7 128 aaKnown RBP7.68□□□□□ -1.18
SLIRP-211ENST00000557623 MYCBP2O75592 4640 aa7.67□□□□□ -1.18
SLIRP-211ENST00000557623 IGLV5-37A0A075B6J1 123 aa7.67□□□□□ -1.18
SLIRP-211ENST00000557623 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
SLIRP-211ENST00000557623 LEPROTO15243 131 aa7.67□□□□□ -1.18
SLIRP-211ENST00000557623 IGLV7-43P04211 117 aa7.67□□□□□ -1.18
SLIRP-211ENST00000557623 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
SLIRP-211ENST00000557623 KRTAP11-1Q8IUC1 163 aa7.67□□□□□ -1.18
SLIRP-211ENST00000557623 NKAPP1Q8N9T2 125 aa7.67□□□□□ -1.18
SLIRP-211ENST00000557623 PLEKHB2Q96CS7 222 aa7.67□□□□□ -1.18
SLIRP-211ENST00000557623 SND1-IT1Q9HBX3 110 aa7.67□□□□□ -1.18
SLIRP-211ENST00000557623 MYMXA0A1B0GTQ4 84 aa7.66□□□□□ -1.18
SLIRP-211ENST00000557623 SYS1-DBNDD2H3BUS1 97 aa7.66□□□□□ -1.18
SLIRP-211ENST00000557623 LINC00158P58513 81 aa7.66□□□□□ -1.18
SLIRP-211ENST00000557623 PMCHL2Q9BQD1 86 aa7.66□□□□□ -1.18
SLIRP-211ENST00000557623 NDUFA12Q9UI09 145 aa7.66□□□□□ -1.18
SLIRP-211ENST00000557623 ATP6V1G1O75348 118 aa7.65□□□□□ -1.18
SLIRP-211ENST00000557623 RPL24P83731 157 aaKnown RBP7.65□□□□□ -1.18
SLIRP-211ENST00000557623 MEIG1Q5JSS6 88 aa7.65□□□□□ -1.18
SLIRP-211ENST00000557623 DMBT1Q9UGM3 2413 aaPredicted RBP7.64□□□□□ -1.19
SLIRP-211ENST00000557623 PET117Q6UWS5 81 aa7.64□□□□□ -1.19
SLIRP-211ENST00000557623 DIRC1Q969H9 104 aa7.64□□□□□ -1.19
SLIRP-211ENST00000557623 LINC01600Q96MT4 127 aa7.64□□□□□ -1.19
SLIRP-211ENST00000557623 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
SLIRP-211ENST00000557623 J3QQQ9 107 aa7.63□□□□□ -1.19
SLIRP-211ENST00000557623 LGALS3P17931 250 aaKnown RBP7.63□□□□□ -1.19
SLIRP-211ENST00000557623 NMUP48645 174 aa7.63□□□□□ -1.19
SLIRP-211ENST00000557623 KRTAP4-7Q9BYR0 210 aa7.63□□□□□ -1.19
SLIRP-211ENST00000557623 A0A0U1RRA0 63 aa7.62□□□□□ -1.19
SLIRP-211ENST00000557623 SMIM13P0DJ93 91 aa7.62□□□□□ -1.19
SLIRP-211ENST00000557623 VPREB1P12018 145 aa7.62□□□□□ -1.19
SLIRP-211ENST00000557623 LINC01545Q5VT33 79 aa7.62□□□□□ -1.19
SLIRP-211ENST00000557623 LRP1Q07954 4544 aaKnown RBP7.61□□□□□ -1.19
SLIRP-211ENST00000557623 GAGE10A6NGK3 116 aa7.61□□□□□ -1.19
SLIRP-211ENST00000557623 RPL37AP8A6NKH3 93 aa7.61□□□□□ -1.19
SLIRP-211ENST00000557623 E9PLD3 99 aa7.61□□□□□ -1.19
SLIRP-211ENST00000557623 TSPEAR-AS2P59090 65 aa7.61□□□□□ -1.19
SLIRP-211ENST00000557623 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
SLIRP-211ENST00000557623 H0Y9J4 135 aa7.6□□□□□ -1.19
SLIRP-211ENST00000557623 BCE1O60756 84 aa7.6□□□□□ -1.19
SLIRP-211ENST00000557623 C3orf79P0CE67 100 aa7.6□□□□□ -1.19
SLIRP-211ENST00000557623 MT1HL1P0DM35 61 aa7.6□□□□□ -1.19
SLIRP-211ENST00000557623 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
SLIRP-211ENST00000557623 ZNF861PO60384 105 aa7.59□□□□□ -1.19
SLIRP-211ENST00000557623 KRTDAPP60985 99 aa7.59□□□□□ -1.19
SLIRP-211ENST00000557623 IGLV1-50A0A075B6I6 118 aa7.58□□□□□ -1.2
SLIRP-211ENST00000557623 C20orf202A1L168 122 aa7.58□□□□□ -1.2
SLIRP-211ENST00000557623 RPL28P46779 137 aaKnown RBP7.58□□□□□ -1.2
SLIRP-211ENST00000557623 IGKV2-28A0A075B6P5 120 aa7.57□□□□□ -1.2
SLIRP-211ENST00000557623 IGKV2D-28P01615 120 aa7.57□□□□□ -1.2
SLIRP-211ENST00000557623 AKR1D1P51857 326 aa7.57□□□□□ -1.2
SLIRP-211ENST00000557623 C21orf62-AS1Q17RA5 79 aa7.57□□□□□ -1.2
SLIRP-211ENST00000557623 BOD1L2Q8IYS8 172 aa7.57□□□□□ -1.2
SLIRP-211ENST00000557623 M0R378 163 aa7.56□□□□□ -1.2
SLIRP-211ENST00000557623 IGKV2D-26A0A0A0MRZ7 120 aa7.55□□□□□ -1.2
SLIRP-211ENST00000557623 LOC107984156A0A0G2JMH3 177 aa7.55□□□□□ -1.2
SLIRP-211ENST00000557623 KRTAP10-8P60410 259 aa7.55□□□□□ -1.2
SLIRP-211ENST00000557623 ARL17AQ8IVW1 177 aa7.55□□□□□ -1.2
SLIRP-211ENST00000557623 Q8NDZ9 215 aa7.55□□□□□ -1.2
SLIRP-211ENST00000557623 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
SLIRP-211ENST00000557623 S100A6P06703 90 aa7.54□□□□□ -1.2
SLIRP-211ENST00000557623 S100A2P29034 98 aa7.54□□□□□ -1.2
SLIRP-211ENST00000557623 UBE2AP49459 152 aa7.54□□□□□ -1.2
SLIRP-211ENST00000557623 MIEN1Q9BRT3 115 aa7.54□□□□□ -1.2
SLIRP-211ENST00000557623 DAND5Q8N907 189 aa7.53□□□□□ -1.2
SLIRP-211ENST00000557623 TMEM126AQ9H061 195 aa7.53□□□□□ -1.2
SLIRP-211ENST00000557623 NCR3O14931 201 aa7.52□□□□□ -1.21
SLIRP-211ENST00000557623 FAM19A1Q7Z5A9 133 aa7.52□□□□□ -1.21
SLIRP-211ENST00000557623 HIST3H2BBQ8N257 126 aa7.52□□□□□ -1.21
SLIRP-211ENST00000557623 KRTAP4-9Q9BYQ8 210 aa7.52□□□□□ -1.21
SLIRP-211ENST00000557623 ZNF815PA8K554 130 aa7.51□□□□□ -1.21
SLIRP-211ENST00000557623 TMEM238C9JI98 176 aa7.51□□□□□ -1.21
SLIRP-211ENST00000557623 S100A12P80511 92 aa7.51□□□□□ -1.21
SLIRP-211ENST00000557623 KRTAP13-1Q8IUC0 172 aa7.51□□□□□ -1.21
SLIRP-211ENST00000557623 HERC1Q15751 4861 aa7.5□□□□□ -1.21
SLIRP-211ENST00000557623 TRBV10-2A0A0K0K1G8 114 aa7.5□□□□□ -1.21
SLIRP-211ENST00000557623 PRYO14603 147 aa7.5□□□□□ -1.21
SLIRP-211ENST00000557623 TIMM17BO60830 172 aa7.5□□□□□ -1.21
SLIRP-211ENST00000557623 NDUFC2O95298 119 aa7.5□□□□□ -1.21
SLIRP-211ENST00000557623 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
SLIRP-211ENST00000557623 HIST1H2BLQ99880 126 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms