RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 TMEM238C9JI98 176 aa1.84□□□□□ -2.11
CHD8-212ENST00000557329 F2Z2F3 143 aa1.84□□□□□ -2.11
CHD8-212ENST00000557329 ATP6V1G2O95670 118 aa1.84□□□□□ -2.11
CHD8-212ENST00000557329 PLEKHB2Q96CS7 222 aa1.84□□□□□ -2.11
CHD8-212ENST00000557329 MUC12Q9UKN1 5478 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 BPY2O14599 106 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 SSNA1O43805 119 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 PFDN1O60925 122 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 IGLV6-57P01721 117 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 S100A9P06702 114 aaKnown RBP1.83□□□□□ -2.12
CHD8-212ENST00000557329 CXCL1P09341 107 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 PET100P0DJ07 73 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 AKR1C8PQ5T2L2 129 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 C9orf153Q5TBE3 101 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 TEX261Q6UWH6 196 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 AKAP14Q86UN6 197 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 PPP1R1CQ8WVI7 109 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 ZNF706Q9Y5V0 76 aaPredicted RBP1.83□□□□□ -2.12
CHD8-212ENST00000557329 V9GYH0 126 aa1.83□□□□□ -2.12
CHD8-212ENST00000557329 BORCS7-ASMTA0A0B4J1R7 106 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 CTXND1A0A1B0GTU2 59 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 FAM240BA0A1B0GVZ2 78 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 RAB19A4D1S5 217 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 LYRM1O43325 122 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 HBBP68871 147 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 SERF2P84101 59 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 IL15RAQ13261 267 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 MRPL52Q86TS9 123 aaKnown RBP1.82□□□□□ -2.12
CHD8-212ENST00000557329 BORCS7Q96B45 105 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 TP73-AS1Q9UF72 201 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 TNFSF18Q9UNG2 199 aa1.82□□□□□ -2.12
CHD8-212ENST00000557329 FLGP20930 4061 aaPredicted RBP1.81□□□□□ -2.12
CHD8-212ENST00000557329 TRBV20OR9-2A0A075B6H5 130 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 IGHV3OR16-9A0A0B4J2B5 98 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 FAM236DA0A1B0GTK5 79 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 C20orf202A1L168 122 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 MAP1LC3B2A6NCE7 125 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 SMKR1H3BMG3 65 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 MPC2O95563 127 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 IGLC6P0CF74 106 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 FAM236CP0DP71 79 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 RPL35P42766 123 aaKnown RBP1.81□□□□□ -2.12
CHD8-212ENST00000557329 GNG4P50150 75 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 RAB14P61106 215 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 RPL39P62891 51 aaKnown RBP1.81□□□□□ -2.12
CHD8-212ENST00000557329 ZNF726P1Q15940 193 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 RPL7L1Q6DKI1 246 aaKnown RBP1.81□□□□□ -2.12
CHD8-212ENST00000557329 SPRR4Q96PI1 79 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 GNB1LQ9BYB4 327 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 MAP1LC3BQ9GZQ8 125 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 TMEM126AQ9H061 195 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 MED9Q9NWA0 146 aa1.81□□□□□ -2.12
CHD8-212ENST00000557329 TRBV20-1A0A075B6N2 111 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 IL7P13232 177 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 RAB5AP20339 215 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 PFN2P35080 140 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 CENPWQ5EE01 88 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 FAM19A3Q7Z5A8 133 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 KRTAP13-1Q8IUC0 172 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 C9orf62Q8N4C0 152 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 KCNRGQ8N5I3 272 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 SMCR5Q8TEV8 140 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 SFT2D1Q8WV19 159 aa1.8□□□□□ -2.12
CHD8-212ENST00000557329 PSMG3Q9BT73 122 aaPredicted RBP1.8□□□□□ -2.12
CHD8-212ENST00000557329 F8VRH5 84 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 H7C2G1 150 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 PLA2G10O15496 165 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 MT2AP02795 61 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 H2BFSP57053 126 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 ATP11AUNQ6ZP68 121 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 FAM231DQ6ZW35 169 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 SSBP3-AS1Q7Z2R9 100 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 AMN1Q8IY45 258 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 ENKURQ8TC29 256 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 TCEAL7Q9BRU2 100 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 C2orf88Q9BSF0 95 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 TMEM191AQ9H0A3 160 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 BIN3Q9NQY0 253 aa1.79□□□□□ -2.12
CHD8-212ENST00000557329 CSDC2Q9Y534 153 aaKnown RBP1.79□□□□□ -2.12
CHD8-212ENST00000557329 TRBV6-5A0A0K0K1A5 114 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 ETDCA0A1B0GVM5 59 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 M0R378 163 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 TCAPO15273 167 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 MT1FP04733 61 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 KRTAP2-3P0C7H8 128 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 IFI27P40305 119 aaPredicted RBP1.78□□□□□ -2.12
CHD8-212ENST00000557329 POLR2KP53803 58 aaKnown RBP1.78□□□□□ -2.12
CHD8-212ENST00000557329 RPL37P61927 97 aaKnown RBP1.78□□□□□ -2.12
CHD8-212ENST00000557329 KRTAP19-6Q3LI70 58 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 ORMDL2Q53FV1 153 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 FAM213BQ8TBF2 198 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 KRTAP2-4Q9BYR9 128 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 GNG13Q9P2W3 67 aa1.78□□□□□ -2.12
CHD8-212ENST00000557329 TRBV27A0A0K0K1C4 114 aa1.77□□□□□ -2.13
CHD8-212ENST00000557329 LOC389332A0A1B0GUA5 103 aa1.77□□□□□ -2.13
CHD8-212ENST00000557329 A8MWL6 223 aa1.77□□□□□ -2.13
CHD8-212ENST00000557329 GATCO43716 136 aaKnown RBP1.77□□□□□ -2.13
CHD8-212ENST00000557329 RAB4AP20338 218 aa1.77□□□□□ -2.13
CHD8-212ENST00000557329 TAGLN2P37802 199 aaKnown RBP1.77□□□□□ -2.13
CHD8-212ENST00000557329 Q8IZM0 81 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms