RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 LINC00310P59036 64 aa9.88□□□□□ -0.83
VSX1-207ENST00000557285 RPL24P83731 157 aaKnown RBP9.88□□□□□ -0.83
VSX1-207ENST00000557285 TMEM238C9JI98 176 aa9.87□□□□□ -0.83
VSX1-207ENST00000557285 FABP4P15090 132 aa9.87□□□□□ -0.83
VSX1-207ENST00000557285 RPL13AP40429 203 aaKnown RBP9.87□□□□□ -0.83
VSX1-207ENST00000557285 MEIG1Q5JSS6 88 aa9.87□□□□□ -0.83
VSX1-207ENST00000557285 ATP6V1G1O75348 118 aa9.86□□□□□ -0.83
VSX1-207ENST00000557285 SMIM13P0DJ93 91 aa9.86□□□□□ -0.83
VSX1-207ENST00000557285 COLCA2A8K830 154 aa9.85□□□□□ -0.83
VSX1-207ENST00000557285 PRLHP81277 87 aa9.85□□□□□ -0.83
VSX1-207ENST00000557285 FAM19A1Q7Z5A9 133 aa9.85□□□□□ -0.83
VSX1-207ENST00000557285 PMCHL2Q9BQD1 86 aa9.85□□□□□ -0.83
VSX1-207ENST00000557285 ANAPC11Q9NYG5 84 aa9.85□□□□□ -0.83
VSX1-207ENST00000557285 A0A087X002 238 aa9.83□□□□□ -0.84
VSX1-207ENST00000557285 TMEM126AQ9H061 195 aa9.83□□□□□ -0.84
VSX1-207ENST00000557285 NDUFA12Q9UI09 145 aa9.83□□□□□ -0.84
VSX1-207ENST00000557285 HSPB8Q9UJY1 196 aa9.83□□□□□ -0.84
VSX1-207ENST00000557285 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
VSX1-207ENST00000557285 M0R378 163 aa9.81□□□□□ -0.84
VSX1-207ENST00000557285 NCR3O14931 201 aa9.81□□□□□ -0.84
VSX1-207ENST00000557285 TSPEAR-AS2P59090 65 aa9.81□□□□□ -0.84
VSX1-207ENST00000557285 BOD1L2Q8IYS8 172 aa9.81□□□□□ -0.84
VSX1-207ENST00000557285 MIR7-3HGQ8N6C7 128 aa9.81□□□□□ -0.84
VSX1-207ENST00000557285 MYMXA0A1B0GTQ4 84 aa9.8□□□□□ -0.84
VSX1-207ENST00000557285 TSPAN13O95857 204 aa9.8□□□□□ -0.84
VSX1-207ENST00000557285 CRYGAP11844 174 aa9.8□□□□□ -0.84
VSX1-207ENST00000557285 PLNP26678 52 aa9.8□□□□□ -0.84
VSX1-207ENST00000557285 HERV-K104P63124 156 aa9.8□□□□□ -0.84
VSX1-207ENST00000557285 DPM2O94777 84 aa9.79□□□□□ -0.84
VSX1-207ENST00000557285 TYMSOSQ8TAI1 123 aa9.79□□□□□ -0.84
VSX1-207ENST00000557285 LPAP08519 4548 aa9.79□□□□□ -0.84
VSX1-207ENST00000557285 LEPROTO15243 131 aa9.78□□□□□ -0.84
VSX1-207ENST00000557285 RNF213Q63HN8 5207 aa9.77□□□□□ -0.85
VSX1-207ENST00000557285 HERVK_113P61574 105 aa9.77□□□□□ -0.85
VSX1-207ENST00000557285 PRR4Q16378 134 aa9.77□□□□□ -0.85
VSX1-207ENST00000557285 DAND5Q8N907 189 aa9.77□□□□□ -0.85
VSX1-207ENST00000557285 PLEKHB2Q96CS7 222 aa9.77□□□□□ -0.85
VSX1-207ENST00000557285 IGKCP01834 107 aa9.76□□□□□ -0.85
VSX1-207ENST00000557285 HIGD2AQ9BW72 106 aa9.76□□□□□ -0.85
VSX1-207ENST00000557285 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
VSX1-207ENST00000557285 LINC00587B1AMM8 73 aa9.75□□□□□ -0.85
VSX1-207ENST00000557285 J3QQQ9 107 aa9.75□□□□□ -0.85
VSX1-207ENST00000557285 LGALS3P17931 250 aaKnown RBP9.74□□□□□ -0.85
VSX1-207ENST00000557285 KRTAP13-2Q52LG2 175 aa9.74□□□□□ -0.85
VSX1-207ENST00000557285 HIST1H2BKO60814 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST1H2BJP06899 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST1H2BOP23527 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST1H2BBP33778 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST1H2BDP58876 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST1H2BCP62807 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST2H2BEQ16778 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST1H2BHQ93079 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST1H2BNQ99877 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 HIST1H2BMQ99879 126 aa9.73□□□□□ -0.85
VSX1-207ENST00000557285 IGKV2D-26A0A0A0MRZ7 120 aa9.71□□□□□ -0.86
VSX1-207ENST00000557285 FAM229BQ4G0N7 80 aa9.71□□□□□ -0.86
VSX1-207ENST00000557285 TRBV10-3A0A0K0K1G6 114 aa9.7□□□□□ -0.86
VSX1-207ENST00000557285 PRYO14603 147 aa9.7□□□□□ -0.86
VSX1-207ENST00000557285 NMUP48645 174 aa9.69□□□□□ -0.86
VSX1-207ENST00000557285 NPC2P61916 151 aa9.69□□□□□ -0.86
VSX1-207ENST00000557285 MIEN1Q9BRT3 115 aa9.69□□□□□ -0.86
VSX1-207ENST00000557285 ETDCA0A1B0GVM5 59 aa9.68□□□□□ -0.86
VSX1-207ENST00000557285 SYS1-DBNDD2H3BUS1 97 aa9.68□□□□□ -0.86
VSX1-207ENST00000557285 C3orf22Q8N5N4 141 aa9.67□□□□□ -0.86
VSX1-207ENST00000557285 LINC00304Q8N9R0 145 aa9.67□□□□□ -0.86
VSX1-207ENST00000557285 KCNQ1DNQ9H478 68 aa9.66□□□□□ -0.86
VSX1-207ENST00000557285 E9PLD3 99 aa9.65□□□□□ -0.86
VSX1-207ENST00000557285 DDTP30046 118 aa9.65□□□□□ -0.86
VSX1-207ENST00000557285 S100A12P80511 92 aa9.65□□□□□ -0.86
VSX1-207ENST00000557285 SPRR4Q96PI1 79 aa9.65□□□□□ -0.86
VSX1-207ENST00000557285 A0A0J9YXY3 114 aa9.64□□□□□ -0.87
VSX1-207ENST00000557285 LINC00337Q8N6G1 96 aa9.64□□□□□ -0.87
VSX1-207ENST00000557285 RETNLBQ9BQ08 111 aa9.64□□□□□ -0.87
VSX1-207ENST00000557285 PPDPFQ9H3Y8 114 aa9.64□□□□□ -0.87
VSX1-207ENST00000557285 SPRR1AP35321 89 aa9.63□□□□□ -0.87
VSX1-207ENST00000557285 S100A7L2Q5SY68 101 aa9.63□□□□□ -0.87
VSX1-207ENST00000557285 ADAMTSL4-AS1Q5T5F5 129 aa9.63□□□□□ -0.87
VSX1-207ENST00000557285 SMCR5Q8TEV8 140 aa9.63□□□□□ -0.87
VSX1-207ENST00000557285 SPANXB1Q9NS25 103 aaPredicted RBP9.63□□□□□ -0.87
VSX1-207ENST00000557285 ZNF706Q9Y5V0 76 aaPredicted RBP9.63□□□□□ -0.87
VSX1-207ENST00000557285 LOC107984156A0A0G2JMH3 177 aa9.62□□□□□ -0.87
VSX1-207ENST00000557285 EIF4EBP3O60516 100 aaPredicted RBP9.62□□□□□ -0.87
VSX1-207ENST00000557285 KRTDAPP60985 99 aa9.62□□□□□ -0.87
VSX1-207ENST00000557285 LINC01545Q5VT33 79 aa9.62□□□□□ -0.87
VSX1-207ENST00000557285 SOSTDC1Q6X4U4 206 aa9.62□□□□□ -0.87
VSX1-207ENST00000557285 ARL17AQ8IVW1 177 aa9.62□□□□□ -0.87
VSX1-207ENST00000557285 TRBV10-2A0A0K0K1G8 114 aa9.61□□□□□ -0.87
VSX1-207ENST00000557285 KRTAP4-16G5E9R7 235 aaPredicted RBP9.61□□□□□ -0.87
VSX1-207ENST00000557285 PET117Q6UWS5 81 aa9.61□□□□□ -0.87
VSX1-207ENST00000557285 C3orf79P0CE67 100 aa9.6□□□□□ -0.87
VSX1-207ENST00000557285 B5MCH6 92 aa9.59□□□□□ -0.87
VSX1-207ENST00000557285 TTTY13Q9BZ97 58 aa9.59□□□□□ -0.87
VSX1-207ENST00000557285 ZNF815PA8K554 130 aa9.58□□□□□ -0.88
VSX1-207ENST00000557285 NDUFC2O95298 119 aa9.58□□□□□ -0.88
VSX1-207ENST00000557285 GAGE2AQ6NT46 116 aa9.58□□□□□ -0.88
VSX1-207ENST00000557285 TRAV23DV6A0A075B6W5 121 aa9.57□□□□□ -0.88
VSX1-207ENST00000557285 ERC2-IT1O76042 136 aa9.57□□□□□ -0.88
VSX1-207ENST00000557285 IGLV6-57P01721 117 aa9.56□□□□□ -0.88
VSX1-207ENST00000557285 LINC00308Q8TCZ7 52 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms