RNA–Protein interactions for RNA: ENST00000557024.1

SYNE2-224, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 998 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-224ENST00000557024 ORAOV1Q8WV07 137 aa5.81□□□□□ -1.48
SYNE2-224ENST00000557024 IGLV5-45A0A087WSX0 123 aa5.8□□□□□ -1.48
SYNE2-224ENST00000557024 TMEM223A0PJW6 202 aa5.8□□□□□ -1.48
SYNE2-224ENST00000557024 SLPIP03973 132 aa5.8□□□□□ -1.48
SYNE2-224ENST00000557024 SPINK6Q6UWN8 80 aa5.8□□□□□ -1.48
SYNE2-224ENST00000557024 MUC2Q02817 5179 aa5.79□□□□□ -1.48
SYNE2-224ENST00000557024 SPAG11BQ08648 103 aa5.79□□□□□ -1.48
SYNE2-224ENST00000557024 HIGD2BQ4VC39 106 aa5.79□□□□□ -1.48
SYNE2-224ENST00000557024 C6orf226Q5I0X4 101 aa5.79□□□□□ -1.48
SYNE2-224ENST00000557024 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.78□□□□□ -1.48
SYNE2-224ENST00000557024 A0A0U1RQV1 116 aa5.78□□□□□ -1.48
SYNE2-224ENST00000557024 SMIM1B2RUZ4 78 aa5.78□□□□□ -1.48
SYNE2-224ENST00000557024 LGALS3P17931 250 aaKnown RBP5.78□□□□□ -1.48
SYNE2-224ENST00000557024 MAJINQ3KP22 176 aa5.78□□□□□ -1.48
SYNE2-224ENST00000557024 STPG4Q8N801 248 aa5.78□□□□□ -1.48
SYNE2-224ENST00000557024 COX7B2Q8TF08 81 aa5.78□□□□□ -1.48
SYNE2-224ENST00000557024 PLEKHB2Q96CS7 222 aa5.78□□□□□ -1.48
SYNE2-224ENST00000557024 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 IGKV2-24A0A0C4DH68 120 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 LOC105371267A0A1B0GV96 52 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 LEPROTO15243 131 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 CKS1BP61024 79 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 S100A12P80511 92 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 PYY3Q5JQD4 70 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 Q8IZM0 81 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 CAMK2N2Q96S95 79 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 VAMP8Q9BV40 100 aa5.77□□□□□ -1.49
SYNE2-224ENST00000557024 E9PLD3 99 aa5.76□□□□□ -1.49
SYNE2-224ENST00000557024 NDUFA1O15239 70 aa5.76□□□□□ -1.49
SYNE2-224ENST00000557024 CXCL5P42830 114 aa5.76□□□□□ -1.49
SYNE2-224ENST00000557024 NMUP48645 174 aa5.76□□□□□ -1.49
SYNE2-224ENST00000557024 SRSF9Q13242 221 aaKnown RBP eCLIP5.76□□□□□ -1.49
SYNE2-224ENST00000557024 C15orf56Q8N910 161 aa5.76□□□□□ -1.49
SYNE2-224ENST00000557024 LINC00526Q96FQ7 95 aa5.76□□□□□ -1.49
SYNE2-224ENST00000557024 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
SYNE2-224ENST00000557024 GVQW2A0A096LPI5 108 aaPredicted RBP5.75□□□□□ -1.49
SYNE2-224ENST00000557024 IGLV5-39A0A0G2JS06 123 aa5.75□□□□□ -1.49
SYNE2-224ENST00000557024 F8WDY8 70 aa5.75□□□□□ -1.49
SYNE2-224ENST00000557024 J3QQQ9 107 aa5.75□□□□□ -1.49
SYNE2-224ENST00000557024 PCP4P48539 62 aa5.75□□□□□ -1.49
SYNE2-224ENST00000557024 SPATA45Q537H7 98 aa5.75□□□□□ -1.49
SYNE2-224ENST00000557024 SFTA2Q6UW10 78 aa5.75□□□□□ -1.49
SYNE2-224ENST00000557024 C2orf48Q96LS8 159 aa5.75□□□□□ -1.49
SYNE2-224ENST00000557024 PAM16Q9Y3D7 125 aa5.75□□□□□ -1.49
SYNE2-224ENST00000557024 MYMXA0A1B0GTQ4 84 aa5.74□□□□□ -1.49
SYNE2-224ENST00000557024 SYCNQ0VAF6 134 aa5.74□□□□□ -1.49
SYNE2-224ENST00000557024 NDUFA12Q9UI09 145 aa5.74□□□□□ -1.49
SYNE2-224ENST00000557024 PRYO14603 147 aa5.73□□□□□ -1.49
SYNE2-224ENST00000557024 SMIM6P0DI80 62 aa5.73□□□□□ -1.49
SYNE2-224ENST00000557024 KIAA0087Q14695 138 aa5.73□□□□□ -1.49
SYNE2-224ENST00000557024 MEIG1Q5JSS6 88 aa5.73□□□□□ -1.49
SYNE2-224ENST00000557024 C2orf82Q6UX34 121 aa5.73□□□□□ -1.49
SYNE2-224ENST00000557024 CARD19Q96LW7 228 aa5.73□□□□□ -1.49
SYNE2-224ENST00000557024 A0A096LNI7 61 aa5.72□□□□□ -1.49
SYNE2-224ENST00000557024 IGKV2D-26A0A0A0MRZ7 120 aa5.72□□□□□ -1.49
SYNE2-224ENST00000557024 TRBV30A0A0K0K1B3 111 aa5.72□□□□□ -1.49
SYNE2-224ENST00000557024 ZNF815PA8K554 130 aa5.72□□□□□ -1.49
SYNE2-224ENST00000557024 HERV-K104P63124 156 aa5.72□□□□□ -1.49
SYNE2-224ENST00000557024 UNQ6190/PRO20217Q6UXQ8 127 aa5.72□□□□□ -1.49
SYNE2-224ENST00000557024 Q6ZRP5 223 aa5.72□□□□□ -1.49
SYNE2-224ENST00000557024 ZNF625Q96I27 306 aaPredicted RBP5.72□□□□□ -1.49
SYNE2-224ENST00000557024 LINC00587B1AMM8 73 aa5.71□□□□□ -1.5
SYNE2-224ENST00000557024 SCGB1D4Q6XE38 83 aa5.71□□□□□ -1.5
SYNE2-224ENST00000557024 PKIGQ9Y2B9 76 aa5.71□□□□□ -1.5
SYNE2-224ENST00000557024 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
SYNE2-224ENST00000557024 PRR4Q16378 134 aa5.7□□□□□ -1.5
SYNE2-224ENST00000557024 A0A0U1RRA0 63 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 COX8AP10176 69 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 PFN2P35080 140 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 LINC00158P58513 81 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 RPL18AQ02543 176 aaKnown RBP5.69□□□□□ -1.5
SYNE2-224ENST00000557024 C10orf25Q5T742 122 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 PCP2Q8IVA1 136 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 C14orf144Q96I85 54 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 C12orf57Q99622 126 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 TTTY13Q9BZ97 58 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 C6orf48Q9UBA6 75 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 PSORS1C2Q9UIG4 136 aa5.69□□□□□ -1.5
SYNE2-224ENST00000557024 LOC107984640A0A0U1RRK4 108 aa5.68□□□□□ -1.5
SYNE2-224ENST00000557024 C9orf116Q5BN46 136 aaPredicted RBP5.68□□□□□ -1.5
SYNE2-224ENST00000557024 SLC25A34Q6PIV7 304 aa5.68□□□□□ -1.5
SYNE2-224ENST00000557024 ERG28Q9UKR5 140 aa5.68□□□□□ -1.5
SYNE2-224ENST00000557024 A0A0J9YXY3 114 aa5.67□□□□□ -1.5
SYNE2-224ENST00000557024 TMEM238C9JI98 176 aa5.67□□□□□ -1.5
SYNE2-224ENST00000557024 SMIM13P0DJ93 91 aa5.67□□□□□ -1.5
SYNE2-224ENST00000557024 GAGE2BQ13066 116 aa5.67□□□□□ -1.5
SYNE2-224ENST00000557024 COX17Q14061 63 aa5.67□□□□□ -1.5
SYNE2-224ENST00000557024 LINC00474Q9P2X8 69 aa5.67□□□□□ -1.5
SYNE2-224ENST00000557024 GAGE2EQ4V326 116 aa5.66□□□□□ -1.5
SYNE2-224ENST00000557024 BOD1L2Q8IYS8 172 aa5.66□□□□□ -1.5
SYNE2-224ENST00000557024 PRO1933Q9H354 126 aa5.66□□□□□ -1.5
SYNE2-224ENST00000557024 UQCR10Q9UDW1 63 aa5.66□□□□□ -1.5
SYNE2-224ENST00000557024 GAGE2DQ9UEU5 116 aa5.66□□□□□ -1.5
SYNE2-224ENST00000557024 NDUFC2-KCTD14E9PQ53 114 aa5.65□□□□□ -1.5
SYNE2-224ENST00000557024 TSTD3H0UI37 97 aa5.65□□□□□ -1.5
SYNE2-224ENST00000557024 DLEU1O43261 78 aa5.65□□□□□ -1.5
SYNE2-224ENST00000557024 TIMM17BO60830 172 aa5.65□□□□□ -1.5
SYNE2-224ENST00000557024 LINC00518Q8N0U6 118 aa5.65□□□□□ -1.5
SYNE2-224ENST00000557024 MIEN1Q9BRT3 115 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms