RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 DSCR8Q96T75 97 aa7.73□□□□□ -1.17
SRP54-213ENST00000556994 UBL5Q9BZL1 73 aa7.73□□□□□ -1.17
SRP54-213ENST00000556994 CYSRT1A8MQ03 144 aa7.72□□□□□ -1.17
SRP54-213ENST00000556994 HTN3P15516 51 aa7.72□□□□□ -1.17
SRP54-213ENST00000556994 RBM3P98179 157 aaKnown RBP7.72□□□□□ -1.17
SRP54-213ENST00000556994 SPAG11BQ08648 103 aa7.72□□□□□ -1.17
SRP54-213ENST00000556994 DPH3Q96FX2 82 aa7.72□□□□□ -1.17
SRP54-213ENST00000556994 SMR3AQ99954 134 aa7.72□□□□□ -1.17
SRP54-213ENST00000556994 CELA1Q9UNI1 258 aa7.72□□□□□ -1.17
SRP54-213ENST00000556994 LYPD5Q6UWN5 251 aa7.71□□□□□ -1.18
SRP54-213ENST00000556994 Q6ZQT0 140 aa7.71□□□□□ -1.18
SRP54-213ENST00000556994 SMIM9A6NGZ8 99 aa7.7□□□□□ -1.18
SRP54-213ENST00000556994 TMEM258P61165 79 aa7.7□□□□□ -1.18
SRP54-213ENST00000556994 DAD1P61803 113 aa7.7□□□□□ -1.18
SRP54-213ENST00000556994 LYRM9A8MSI8 78 aa7.7□□□□□ -1.18
SRP54-213ENST00000556994 OXTP01178 125 aa7.7□□□□□ -1.18
SRP54-213ENST00000556994 Q6ZQY7 126 aa7.7□□□□□ -1.18
SRP54-213ENST00000556994 XAGE1AQ9HD64 81 aa7.7□□□□□ -1.18
SRP54-213ENST00000556994 KLK12Q9UKR0 248 aa7.7□□□□□ -1.18
SRP54-213ENST00000556994 ATP5EP2Q5VTU8 51 aa7.69□□□□□ -1.18
SRP54-213ENST00000556994 RPS28P62857 69 aaKnown RBP7.69□□□□□ -1.18
SRP54-213ENST00000556994 HAMPP81172 84 aa7.69□□□□□ -1.18
SRP54-213ENST00000556994 ZNF561-AS1K7EIQ3 104 aa7.68□□□□□ -1.18
SRP54-213ENST00000556994 C20orf197Q8N268 126 aa7.68□□□□□ -1.18
SRP54-213ENST00000556994 TENM1Q9UKZ4 2725 aa7.68□□□□□ -1.18
SRP54-213ENST00000556994 TRBV10-3A0A0K0K1G6 114 aa7.68□□□□□ -1.18
SRP54-213ENST00000556994 IGLV6-57P01721 117 aa7.68□□□□□ -1.18
SRP54-213ENST00000556994 TRRAPQ9Y4A5 3859 aa7.67□□□□□ -1.18
SRP54-213ENST00000556994 LINC01547P58512 204 aaPredicted RBP7.66□□□□□ -1.18
SRP54-213ENST00000556994 A0A0J9YWU9 116 aa7.66□□□□□ -1.18
SRP54-213ENST00000556994 IGHV4-30-4P0DP06 118 aa7.66□□□□□ -1.18
SRP54-213ENST00000556994 Q6ZVQ6 151 aa7.66□□□□□ -1.18
SRP54-213ENST00000556994 LOC110117498A0A087WWA1 95 aa7.65□□□□□ -1.18
SRP54-213ENST00000556994 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
SRP54-213ENST00000556994 HIVEP1P15822 2718 aa7.64□□□□□ -1.19
SRP54-213ENST00000556994 TRAV10A0A0B4J240 114 aa7.64□□□□□ -1.19
SRP54-213ENST00000556994 LELP1Q5T871 98 aa7.64□□□□□ -1.19
SRP54-213ENST00000556994 SCXQ7RTU7 201 aa7.64□□□□□ -1.19
SRP54-213ENST00000556994 Q8NAQ8 132 aa7.63□□□□□ -1.19
SRP54-213ENST00000556994 HIGD2BQ4VC39 106 aa7.63□□□□□ -1.19
SRP54-213ENST00000556994 DIRC1Q969H9 104 aa7.62□□□□□ -1.19
SRP54-213ENST00000556994 PRR34Q9NV39 138 aa7.62□□□□□ -1.19
SRP54-213ENST00000556994 HECTD1Q9ULT8 2610 aa7.62□□□□□ -1.19
SRP54-213ENST00000556994 J3QKU1 62 aa7.62□□□□□ -1.19
SRP54-213ENST00000556994 C9orf66Q5T8R8 295 aa7.62□□□□□ -1.19
SRP54-213ENST00000556994 MUC7Q8TAX7 377 aa7.62□□□□□ -1.19
SRP54-213ENST00000556994 PKD1L1Q8TDX9 2849 aa7.62□□□□□ -1.19
SRP54-213ENST00000556994 UNC79Q9P2D8 2635 aa7.61□□□□□ -1.19
SRP54-213ENST00000556994 ZNF73O43830 326 aaPredicted RBP7.61□□□□□ -1.19
SRP54-213ENST00000556994 APOC4P55056 127 aa7.61□□□□□ -1.19
SRP54-213ENST00000556994 C4orf26Q17RF5 130 aa7.61□□□□□ -1.19
SRP54-213ENST00000556994 SNURFQ9Y675 71 aa7.61□□□□□ -1.19
SRP54-213ENST00000556994 SPART-AS1P0CW21 52 aa7.6□□□□□ -1.19
SRP54-213ENST00000556994 C5orf47Q569G3 176 aa7.6□□□□□ -1.19
SRP54-213ENST00000556994 NOTCH2Q04721 2471 aa7.6□□□□□ -1.19
SRP54-213ENST00000556994 COX7BP24311 80 aa7.6□□□□□ -1.19
SRP54-213ENST00000556994 ATRQ13535 2644 aa7.59□□□□□ -1.19
SRP54-213ENST00000556994 TRAV7A0A075B6U4 112 aa7.58□□□□□ -1.2
SRP54-213ENST00000556994 GVQW2A0A096LPI5 108 aaPredicted RBP7.58□□□□□ -1.2
SRP54-213ENST00000556994 MIFP14174 115 aa7.58□□□□□ -1.2
SRP54-213ENST00000556994 OTOGQ6ZRI0 2925 aa7.58□□□□□ -1.2
SRP54-213ENST00000556994 WFDC10BQ8IUB3 73 aa7.58□□□□□ -1.2
SRP54-213ENST00000556994 CAMK2N2Q96S95 79 aa7.58□□□□□ -1.2
SRP54-213ENST00000556994 TRBV7-4A0A0J9YYF1 115 aa7.57□□□□□ -1.2
SRP54-213ENST00000556994 H7BZZ5 65 aa7.57□□□□□ -1.2
SRP54-213ENST00000556994 ELOF1P60002 83 aaKnown RBP7.57□□□□□ -1.2
SRP54-213ENST00000556994 RMI2Q96E14 147 aa7.57□□□□□ -1.2
SRP54-213ENST00000556994 FAM236DA0A1B0GTK5 79 aa7.57□□□□□ -1.2
SRP54-213ENST00000556994 FAM236CP0DP71 79 aa7.57□□□□□ -1.2
SRP54-213ENST00000556994 PDE6GP18545 87 aa7.57□□□□□ -1.2
SRP54-213ENST00000556994 Q5XG85 94 aa7.57□□□□□ -1.2
SRP54-213ENST00000556994 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.57□□□□□ -1.2
SRP54-213ENST00000556994 NDUFC2-KCTD14E9PQ53 114 aa7.56□□□□□ -1.2
SRP54-213ENST00000556994 VPREB1P12018 145 aa7.56□□□□□ -1.2
SRP54-213ENST00000556994 HRCT1Q6UXD1 115 aa7.56□□□□□ -1.2
SRP54-213ENST00000556994 Q6ZRU5 148 aa7.56□□□□□ -1.2
SRP54-213ENST00000556994 CXCL6P80162 114 aa7.56□□□□□ -1.2
SRP54-213ENST00000556994 TM2D3Q9BRN9 247 aa7.56□□□□□ -1.2
SRP54-213ENST00000556994 FLNBO75369 2602 aaKnown RBP7.56□□□□□ -1.2
SRP54-213ENST00000556994 TEP1Q99973 2627 aaKnown RBP7.55□□□□□ -1.2
SRP54-213ENST00000556994 Q8N9L7 120 aa7.55□□□□□ -1.2
SRP54-213ENST00000556994 BAHCC1Q9P281 2608 aa7.54□□□□□ -1.2
SRP54-213ENST00000556994 H3BQ85 93 aa7.53□□□□□ -1.2
SRP54-213ENST00000556994 F8WEM9 126 aa7.52□□□□□ -1.2
SRP54-213ENST00000556994 M0R378 163 aa7.52□□□□□ -1.2
SRP54-213ENST00000556994 BCE1O60756 84 aa7.52□□□□□ -1.2
SRP54-213ENST00000556994 KLKP1Q107X0 134 aa7.52□□□□□ -1.2
SRP54-213ENST00000556994 INAFM1C9JVW0 142 aa7.52□□□□□ -1.21
SRP54-213ENST00000556994 C15orf56Q8N910 161 aa7.52□□□□□ -1.21
SRP54-213ENST00000556994 RETNQ9HD89 108 aa7.52□□□□□ -1.21
SRP54-213ENST00000556994 KPRPQ5T749 579 aaPredicted RBP7.51□□□□□ -1.21
SRP54-213ENST00000556994 KRTAP26-1Q6PEX3 210 aa7.51□□□□□ -1.21
SRP54-213ENST00000556994 Q6ZRP5 223 aa7.51□□□□□ -1.21
SRP54-213ENST00000556994 LINC00528Q8N1L1 170 aa7.51□□□□□ -1.21
SRP54-213ENST00000556994 TRBV7-6A0A0J9YX20 115 aa7.51□□□□□ -1.21
SRP54-213ENST00000556994 EGFEM1PQ0D2K5 195 aa7.51□□□□□ -1.21
SRP54-213ENST00000556994 DEFB105AQ8NG35 78 aa7.51□□□□□ -1.21
SRP54-213ENST00000556994 NSD1Q96L73 2696 aaPredicted RBP7.5□□□□□ -1.21
SRP54-213ENST00000556994 C3orf84H3BNL1 204 aa7.49□□□□□ -1.21
SRP54-213ENST00000556994 BPY2O14599 106 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 204.9 ms