RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 HIST1H2BJP06899 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 RAB4AP20338 218 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST1H2BOP23527 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 FCER1GP30273 86 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST1H2BBP33778 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 NDUFA6P56556 154 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST1H2BDP58876 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST1H2BCP62807 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST2H2BEQ16778 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 COX19Q49B96 90 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-245ENST00000556958 C5orf38Q86SI9 138 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST3H2BBQ8N257 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 LINC00469Q8N7U9 141 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST1H2BHQ93079 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 PACRGQ96M98 296 aaPredicted RBP3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST1H2BNQ99877 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 HIST1H2BMQ99879 126 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 TMEM191AQ9H0A3 160 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 CDC42SE2Q9NRR3 84 aa3.11□□□□□ -1.91
ATXN3-245ENST00000556958 IGLV5-45A0A087WSX0 123 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 LOC389332A0A1B0GUA5 103 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 SDHAF1A6NFY7 115 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 NDUFC2-KCTD14E9PQ53 114 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 I3L3M4 83 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 TRGC2P03986 189 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 RPL24P83731 157 aaKnown RBP3.1□□□□□ -1.91
ATXN3-245ENST00000556958 KRTAP19-6Q3LI70 58 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
ATXN3-245ENST00000556958 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 UNQ6190/PRO20217Q6UXQ8 127 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 TP73-AS1Q9UF72 201 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 MUC12Q9UKN1 5478 aa3.1□□□□□ -1.91
ATXN3-245ENST00000556958 FLGP20930 4061 aaPredicted RBP3.09□□□□□ -1.91
ATXN3-245ENST00000556958 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 A0A1B0GW15 77 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 IFITM10A6NMD0 228 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 SLC25A20O43772 301 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 PPP1R17O96001 155 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 HBBP68871 147 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 C9orf129Q5T035 196 aaKnown RBP3.09□□□□□ -1.91
ATXN3-245ENST00000556958 FAM104BQ5XKR9 115 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 MRPL55Q7Z7F7 128 aaKnown RBP3.09□□□□□ -1.91
ATXN3-245ENST00000556958 C3orf22Q8N5N4 141 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 ORAOV1Q8WV07 137 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 MRAP2Q96G30 205 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 CNFNQ9BYD5 112 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 C6orf48Q9UBA6 75 aa3.09□□□□□ -1.91
ATXN3-245ENST00000556958 TRBV30A0A0K0K1B3 111 aa3.08□□□□□ -1.92
ATXN3-245ENST00000556958 D6R8Y8 96 aa3.08□□□□□ -1.92
ATXN3-245ENST00000556958 DDTP30046 118 aa3.08□□□□□ -1.92
ATXN3-245ENST00000556958 SMAGPQ0VAQ4 97 aa3.08□□□□□ -1.92
ATXN3-245ENST00000556958 KIAA1644Q3SXP7 199 aa3.08□□□□□ -1.92
ATXN3-245ENST00000556958 TMEM136Q6ZRR5 245 aa3.08□□□□□ -1.92
ATXN3-245ENST00000556958 PRELID3AQ96N28 172 aa3.08□□□□□ -1.92
ATXN3-245ENST00000556958 TRAV13-1A0A0B4J241 112 aa3.07□□□□□ -1.92
ATXN3-245ENST00000556958 TCAPO15273 167 aa3.07□□□□□ -1.92
ATXN3-245ENST00000556958 FABP4P15090 132 aa3.07□□□□□ -1.92
ATXN3-245ENST00000556958 RPS29P62273 56 aaKnown RBP3.07□□□□□ -1.92
ATXN3-245ENST00000556958 RNASE13Q5GAN3 156 aaKnown RBP3.07□□□□□ -1.92
ATXN3-245ENST00000556958 KRTAP13-1Q8IUC0 172 aa3.07□□□□□ -1.92
ATXN3-245ENST00000556958 ORMDL3Q8N138 153 aa3.07□□□□□ -1.92
ATXN3-245ENST00000556958 Q8NBF4 154 aa3.07□□□□□ -1.92
ATXN3-245ENST00000556958 C14orf144Q96I85 54 aa3.07□□□□□ -1.92
ATXN3-245ENST00000556958 KMT2DO14686 5537 aa3.07□□□□□ -1.92
ATXN3-245ENST00000556958 TRBV6-5A0A0K0K1A5 114 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 NPYP01303 97 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 PPBPP02775 128 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 POLR2KP53803 58 aaKnown RBP3.06□□□□□ -1.92
ATXN3-245ENST00000556958 Q6Q795 121 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 ATP5L2Q7Z4Y8 100 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 PLEKHB2Q96CS7 222 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 C20orf78Q9BR46 151 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 GNB1LQ9BYB4 327 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 MAP1LC3AQ9H492 121 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 TRAPPC1Q9Y5R8 145 aa3.06□□□□□ -1.92
ATXN3-245ENST00000556958 TRBV27A0A0K0K1C4 114 aa3.05□□□□□ -1.92
ATXN3-245ENST00000556958 A0A1B0GXF2 115 aa3.05□□□□□ -1.92
ATXN3-245ENST00000556958 RPL37AP8A6NKH3 93 aa3.05□□□□□ -1.92
ATXN3-245ENST00000556958 M0R143 59 aa3.05□□□□□ -1.92
ATXN3-245ENST00000556958 KRTAP2-3P0C7H8 128 aa3.05□□□□□ -1.92
ATXN3-245ENST00000556958 RPL39P62891 51 aaKnown RBP3.05□□□□□ -1.92
ATXN3-245ENST00000556958 Q8N377 158 aa3.05□□□□□ -1.92
ATXN3-245ENST00000556958 LINC00167Q96N53 147 aa3.05□□□□□ -1.92
ATXN3-245ENST00000556958 KRTAP2-4Q9BYR9 128 aa3.05□□□□□ -1.92
ATXN3-245ENST00000556958 CSDC2Q9Y534 153 aaKnown RBP3.05□□□□□ -1.92
ATXN3-245ENST00000556958 C20orf202A1L168 122 aa3.04□□□□□ -1.92
ATXN3-245ENST00000556958 IFI27P40305 119 aaPredicted RBP3.04□□□□□ -1.92
ATXN3-245ENST00000556958 Q8N8P6 123 aa3.04□□□□□ -1.92
ATXN3-245ENST00000556958 SMIM2Q9BVW6 85 aa3.04□□□□□ -1.92
ATXN3-245ENST00000556958 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
ATXN3-245ENST00000556958 TEX43Q6ZNM6 134 aa3.03□□□□□ -1.92
ATXN3-245ENST00000556958 FA2HQ7L5A8 372 aa3.03□□□□□ -1.92
ATXN3-245ENST00000556958 SMIM29Q86T20 159 aa3.03□□□□□ -1.92
ATXN3-245ENST00000556958 GEMIN7Q9H840 131 aaKnown RBP3.03□□□□□ -1.92
ATXN3-245ENST00000556958 XAGE1AQ9HD64 81 aa3.03□□□□□ -1.92
ATXN3-245ENST00000556958 IGHV3OR16-9A0A0B4J2B5 98 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms