RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 TP73-AS1Q9UF72 201 aa10.98□□□□□ -0.65
PSEN1-218ENST00000556864 TIMM17BO60830 172 aa10.97□□□□□ -0.65
PSEN1-218ENST00000556864 RPL24P83731 157 aaKnown RBP10.97□□□□□ -0.65
PSEN1-218ENST00000556864 LBHQ53QV2 105 aaPredicted RBP10.97□□□□□ -0.65
PSEN1-218ENST00000556864 IGLV5-37A0A075B6J1 123 aa10.96□□□□□ -0.65
PSEN1-218ENST00000556864 UBE2BP63146 152 aa10.96□□□□□ -0.65
PSEN1-218ENST00000556864 JOSD1Q15040 202 aaPredicted RBP10.96□□□□□ -0.65
PSEN1-218ENST00000556864 SCGB1D4Q6XE38 83 aa10.96□□□□□ -0.65
PSEN1-218ENST00000556864 PHF5AQ7RTV0 110 aaKnown RBP10.96□□□□□ -0.65
PSEN1-218ENST00000556864 MIEN1Q9BRT3 115 aa10.96□□□□□ -0.65
PSEN1-218ENST00000556864 TTTY13Q9BZ97 58 aa10.95□□□□□ -0.66
PSEN1-218ENST00000556864 MRPL55Q7Z7F7 128 aaKnown RBP10.94□□□□□ -0.66
PSEN1-218ENST00000556864 KRTAP7-1Q8IUC3 87 aa10.94□□□□□ -0.66
PSEN1-218ENST00000556864 C22orf24Q9Y442 160 aa10.94□□□□□ -0.66
PSEN1-218ENST00000556864 TMEM238C9JI98 176 aa10.93□□□□□ -0.66
PSEN1-218ENST00000556864 VPREB1P12018 145 aa10.93□□□□□ -0.66
PSEN1-218ENST00000556864 PCP2Q8IVA1 136 aa10.92□□□□□ -0.66
PSEN1-218ENST00000556864 BOD1L2Q8IYS8 172 aa10.92□□□□□ -0.66
PSEN1-218ENST00000556864 DAND5Q8N907 189 aa10.92□□□□□ -0.66
PSEN1-218ENST00000556864 VAMP8Q9BV40 100 aa10.92□□□□□ -0.66
PSEN1-218ENST00000556864 PRR3P79522 188 aaKnown RBP10.91□□□□□ -0.66
PSEN1-218ENST00000556864 FAT1Q14517 4588 aa10.91□□□□□ -0.66
PSEN1-218ENST00000556864 LOC107984156A0A0G2JMH3 177 aa10.89□□□□□ -0.67
PSEN1-218ENST00000556864 ARL17AQ8IVW1 177 aa10.89□□□□□ -0.67
PSEN1-218ENST00000556864 COPS9Q8WXC6 57 aa10.89□□□□□ -0.67
PSEN1-218ENST00000556864 LITAFQ99732 161 aa10.89□□□□□ -0.67
PSEN1-218ENST00000556864 KRTAP17-1Q9BYP8 105 aa10.89□□□□□ -0.67
PSEN1-218ENST00000556864 ADAMTSL4-AS1Q5T5F5 129 aa10.88□□□□□ -0.67
PSEN1-218ENST00000556864 PAM16Q9Y3D7 125 aa10.88□□□□□ -0.67
PSEN1-218ENST00000556864 ABCA13Q86UQ4 5058 aa10.87□□□□□ -0.67
PSEN1-218ENST00000556864 GAGE10A6NGK3 116 aa10.87□□□□□ -0.67
PSEN1-218ENST00000556864 SPATA45Q537H7 98 aa10.87□□□□□ -0.67
PSEN1-218ENST00000556864 LINC00167Q96N53 147 aa10.87□□□□□ -0.67
PSEN1-218ENST00000556864 SPANXDQ9BXN6 97 aa10.87□□□□□ -0.67
PSEN1-218ENST00000556864 SPANXCQ9NY87 97 aa10.87□□□□□ -0.67
PSEN1-218ENST00000556864 PSORS1C2Q9UIG4 136 aa10.87□□□□□ -0.67
PSEN1-218ENST00000556864 M0R378 163 aa10.86□□□□□ -0.67
PSEN1-218ENST00000556864 KRTAP10-4P60372 401 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-218ENST00000556864 PYY3Q5JQD4 70 aa10.86□□□□□ -0.67
PSEN1-218ENST00000556864 Q6ZVH6 145 aa10.86□□□□□ -0.67
PSEN1-218ENST00000556864 Q8NDZ9 215 aa10.86□□□□□ -0.67
PSEN1-218ENST00000556864 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
PSEN1-218ENST00000556864 NCR3O14931 201 aa10.85□□□□□ -0.67
PSEN1-218ENST00000556864 NDUFC2O95298 119 aa10.85□□□□□ -0.67
PSEN1-218ENST00000556864 COX8AP10176 69 aa10.85□□□□□ -0.67
PSEN1-218ENST00000556864 NPC2P61916 151 aa10.85□□□□□ -0.67
PSEN1-218ENST00000556864 LINC00308Q8TCZ7 52 aa10.85□□□□□ -0.67
PSEN1-218ENST00000556864 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
PSEN1-218ENST00000556864 C1orf137Q5JT78 98 aa10.84□□□□□ -0.67
PSEN1-218ENST00000556864 KRTAP4-5Q9BYR2 181 aa10.84□□□□□ -0.67
PSEN1-218ENST00000556864 TRBV10-2A0A0K0K1G8 114 aa10.83□□□□□ -0.68
PSEN1-218ENST00000556864 RPL37AP8A6NKH3 93 aa10.83□□□□□ -0.68
PSEN1-218ENST00000556864 INAFM2P0DMQ5 153 aa10.83□□□□□ -0.68
PSEN1-218ENST00000556864 IFITM1P13164 125 aa10.83□□□□□ -0.68
PSEN1-218ENST00000556864 SOSTDC1Q6X4U4 206 aa10.83□□□□□ -0.68
PSEN1-218ENST00000556864 PPDPFQ9H3Y8 114 aa10.83□□□□□ -0.68
PSEN1-218ENST00000556864 DLEU1O43261 78 aa10.82□□□□□ -0.68
PSEN1-218ENST00000556864 IGKV2-28A0A075B6P5 120 aa10.81□□□□□ -0.68
PSEN1-218ENST00000556864 IGKV2D-28P01615 120 aa10.81□□□□□ -0.68
PSEN1-218ENST00000556864 S100A12P80511 92 aa10.81□□□□□ -0.68
PSEN1-218ENST00000556864 KRTAP11-1Q8IUC1 163 aa10.81□□□□□ -0.68
PSEN1-218ENST00000556864 IGLV1-50A0A075B6I6 118 aa10.8□□□□□ -0.68
PSEN1-218ENST00000556864 SRSF9Q13242 221 aaKnown RBP eCLIP10.79□□□□□ -0.68
PSEN1-218ENST00000556864 SLC25A34Q6PIV7 304 aa10.79□□□□□ -0.68
PSEN1-218ENST00000556864 IGLV7-43P04211 117 aa10.78□□□□□ -0.68
PSEN1-218ENST00000556864 S100A7L2Q5SY68 101 aa10.78□□□□□ -0.68
PSEN1-218ENST00000556864 C14orf144Q96I85 54 aa10.78□□□□□ -0.68
PSEN1-218ENST00000556864 PCLOQ9Y6V0 5065 aa10.78□□□□□ -0.68
PSEN1-218ENST00000556864 PRYO14603 147 aa10.77□□□□□ -0.69
PSEN1-218ENST00000556864 EIF4EBP3O60516 100 aaPredicted RBP10.77□□□□□ -0.69
PSEN1-218ENST00000556864 BCE1O60756 84 aa10.77□□□□□ -0.69
PSEN1-218ENST00000556864 REG3GQ6UW15 175 aa10.77□□□□□ -0.69
PSEN1-218ENST00000556864 CBY1Q9Y3M2 126 aa10.77□□□□□ -0.69
PSEN1-218ENST00000556864 DDTP30046 118 aa10.76□□□□□ -0.69
PSEN1-218ENST00000556864 SPINK6Q6UWN8 80 aa10.76□□□□□ -0.69
PSEN1-218ENST00000556864 LINC00518Q8N0U6 118 aa10.76□□□□□ -0.69
PSEN1-218ENST00000556864 TMEM126AQ9H061 195 aa10.76□□□□□ -0.69
PSEN1-218ENST00000556864 SRRM2Q9UQ35 2752 aaKnown RBP10.76□□□□□ -0.69
PSEN1-218ENST00000556864 TRBV10-3A0A0K0K1G6 114 aa10.75□□□□□ -0.69
PSEN1-218ENST00000556864 SMIM6P0DI80 62 aa10.75□□□□□ -0.69
PSEN1-218ENST00000556864 HNRNPA3P51991 378 aaKnown RBP10.75□□□□□ -0.69
PSEN1-218ENST00000556864 RPL28P46779 137 aaKnown RBP10.74□□□□□ -0.69
PSEN1-218ENST00000556864 UBE2AP49459 152 aa10.74□□□□□ -0.69
PSEN1-218ENST00000556864 MUSTN1Q8IVN3 82 aa10.74□□□□□ -0.69
PSEN1-218ENST00000556864 HIGD1BQ9P298 99 aa10.74□□□□□ -0.69
PSEN1-218ENST00000556864 DIRC1Q969H9 104 aa10.73□□□□□ -0.69
PSEN1-218ENST00000556864 HIST1H4GQ99525 98 aa10.73□□□□□ -0.69
PSEN1-218ENST00000556864 IGLV6-57P01721 117 aa10.72□□□□□ -0.69
PSEN1-218ENST00000556864 KCNQ1DNQ9H478 68 aa10.72□□□□□ -0.69
PSEN1-218ENST00000556864 PKHD1L1Q86WI1 4243 aa10.72□□□□□ -0.69
PSEN1-218ENST00000556864 FAM19A1Q7Z5A9 133 aa10.71□□□□□ -0.69
PSEN1-218ENST00000556864 OR13C6PQ8NH95 151 aa10.71□□□□□ -0.69
PSEN1-218ENST00000556864 TRAV23DV6A0A075B6W5 121 aa10.7□□□□□ -0.7
PSEN1-218ENST00000556864 ZNF861PO60384 105 aa10.7□□□□□ -0.7
PSEN1-218ENST00000556864 ETDCA0A1B0GVM5 59 aa10.69□□□□□ -0.7
PSEN1-218ENST00000556864 C2orf91Q6ZV80 131 aa10.69□□□□□ -0.7
PSEN1-218ENST00000556864 LINC00337Q8N6G1 96 aa10.69□□□□□ -0.7
PSEN1-218ENST00000556864 H0Y9J4 135 aa10.68□□□□□ -0.7
PSEN1-218ENST00000556864 UQCR10Q9UDW1 63 aa10.68□□□□□ -0.7
PSEN1-218ENST00000556864 TRAV13-2A0A0B4J235 113 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms