RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 MRPS36P82909 103 aaKnown RBP4.83□□□□□ -1.64
HNRNPC-226ENST00000556628 SPAG11BQ08648 103 aa4.83□□□□□ -1.64
HNRNPC-226ENST00000556628 C2orf48Q96LS8 159 aa4.83□□□□□ -1.64
HNRNPC-226ENST00000556628 C2orf88Q9BSF0 95 aa4.83□□□□□ -1.64
HNRNPC-226ENST00000556628 M0R143 59 aa4.82□□□□□ -1.64
HNRNPC-226ENST00000556628 NMUP48645 174 aa4.82□□□□□ -1.64
HNRNPC-226ENST00000556628 HERVK_113P61574 105 aa4.82□□□□□ -1.64
HNRNPC-226ENST00000556628 PRR3P79522 188 aaKnown RBP4.82□□□□□ -1.64
HNRNPC-226ENST00000556628 RPL18AQ02543 176 aaKnown RBP4.82□□□□□ -1.64
HNRNPC-226ENST00000556628 BOD1L2Q8IYS8 172 aa4.82□□□□□ -1.64
HNRNPC-226ENST00000556628 AMELXQ99217 191 aa4.82□□□□□ -1.64
HNRNPC-226ENST00000556628 C11orf86A6NJI1 115 aa4.81□□□□□ -1.64
HNRNPC-226ENST00000556628 F8WDY8 70 aa4.81□□□□□ -1.64
HNRNPC-226ENST00000556628 CTAG1AP78358 180 aa4.81□□□□□ -1.64
HNRNPC-226ENST00000556628 REG3GQ6UW15 175 aa4.81□□□□□ -1.64
HNRNPC-226ENST00000556628 Q6ZRP5 223 aa4.81□□□□□ -1.64
HNRNPC-226ENST00000556628 ORAOV1Q8WV07 137 aa4.81□□□□□ -1.64
HNRNPC-226ENST00000556628 OPRPNQ99935 248 aaPredicted RBP4.81□□□□□ -1.64
HNRNPC-226ENST00000556628 E9PLD3 99 aa4.8□□□□□ -1.64
HNRNPC-226ENST00000556628 NDUFA1O15239 70 aa4.8□□□□□ -1.64
HNRNPC-226ENST00000556628 SEC11AP67812 179 aa4.8□□□□□ -1.64
HNRNPC-226ENST00000556628 TMEM170BQ5T4T1 132 aa4.8□□□□□ -1.64
HNRNPC-226ENST00000556628 SPINK6Q6UWN8 80 aa4.8□□□□□ -1.64
HNRNPC-226ENST00000556628 IGKV2D-26A0A0A0MRZ7 120 aa4.79□□□□□ -1.64
HNRNPC-226ENST00000556628 IGHV3OR16-9A0A0B4J2B5 98 aa4.79□□□□□ -1.64
HNRNPC-226ENST00000556628 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
HNRNPC-226ENST00000556628 C9orf116Q5BN46 136 aaPredicted RBP4.79□□□□□ -1.64
HNRNPC-226ENST00000556628 FAM104AQ969W3 186 aa4.79□□□□□ -1.64
HNRNPC-226ENST00000556628 HIGD1BQ9P298 99 aa4.79□□□□□ -1.64
HNRNPC-226ENST00000556628 A0A0J9YXV3 536 aa4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 TINCRA0A1B0GVN0 87 aa4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 A0A1W2PNN7 141 aa4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 FAM19A3Q7Z5A8 133 aa4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 PCP2Q8IVA1 136 aa4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 LINC01600Q96MT4 127 aa4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 SNHG12Q9BXW3 62 aa4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 GEMIN7Q9H840 131 aaKnown RBP4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 PKHD1L1Q86WI1 4243 aa4.78□□□□□ -1.64
HNRNPC-226ENST00000556628 A0A087WZ39 114 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 MYMXA0A1B0GTQ4 84 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 TMEM223A0PJW6 202 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 H3BRM9 83 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 LEPROTO15243 131 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 UBE2D1P51668 147 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 HERVK_113P63121 156 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 HSD52Q0P140 79 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 TAL2Q16559 108 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 UNQ6190/PRO20217Q6UXQ8 127 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 C2orf91Q6ZV80 131 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 PLEKHB2Q96CS7 222 aa4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 LRP1Q07954 4544 aaKnown RBP4.77□□□□□ -1.65
HNRNPC-226ENST00000556628 FAT3Q8TDW7 4589 aa4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 IGLV5-45A0A087WSX0 123 aa4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 J3QQQ9 107 aa4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 PRSS2P07478 247 aa4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 TLX1NBP0CAT3 122 aa4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 LGALS3P17931 250 aaKnown RBP4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 BATFQ16520 125 aa4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 COL5A1-AS1Q5SY13 56 aa4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 LINC00242Q5T6M2 205 aa4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 PHF5AQ7RTV0 110 aaKnown RBP4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 LINC01561Q8N1V8 128 aa4.76□□□□□ -1.65
HNRNPC-226ENST00000556628 TRBV30A0A0K0K1B3 111 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 ZNF815PA8K554 130 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 HINT1P49773 126 aaPredicted RBP4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 SRSF9Q13242 221 aaKnown RBP eCLIP4.75□□□□□ -1.654e-16■■■□□ 16.3
HNRNPC-226ENST00000556628 GAGE2EQ4V326 116 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 C1orf137Q5JT78 98 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 BVES-AS1Q5T3Y7 98 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 LINC00469Q8N7U9 141 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 TTTY13Q9BZ97 58 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 TOMM7Q9P0U1 55 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 C6orf48Q9UBA6 75 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 GAGE2DQ9UEU5 116 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 TP73-AS1Q9UF72 201 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 PSORS1C2Q9UIG4 136 aa4.75□□□□□ -1.65
HNRNPC-226ENST00000556628 A6NDN8 102 aa4.74□□□□□ -1.65
HNRNPC-226ENST00000556628 CKS1BP61024 79 aa4.74□□□□□ -1.65
HNRNPC-226ENST00000556628 UBE2BP63146 152 aa4.74□□□□□ -1.65
HNRNPC-226ENST00000556628 KIAA0087Q14695 138 aa4.74□□□□□ -1.65
HNRNPC-226ENST00000556628 C6orf226Q5I0X4 101 aa4.74□□□□□ -1.65
HNRNPC-226ENST00000556628 C10orf25Q5T742 122 aa4.74□□□□□ -1.65
HNRNPC-226ENST00000556628 SCGB1D4Q6XE38 83 aa4.74□□□□□ -1.65
HNRNPC-226ENST00000556628 FAM19A5Q7Z5A7 132 aaPredicted RBP4.74□□□□□ -1.65
HNRNPC-226ENST00000556628 NDUFC2-KCTD14E9PQ53 114 aa4.73□□□□□ -1.65
HNRNPC-226ENST00000556628 CDKN2A-AS1Q9UH64 79 aa4.73□□□□□ -1.65
HNRNPC-226ENST00000556628 FAM168BA1KXE4 195 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 M0QXV9 152 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 IGLV7-43P04211 117 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 SPINK8P0C7L1 97 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 TSPEAR-AS2P59090 65 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 KRTAP10-8P60410 259 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 C2orf82Q6UX34 121 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 Q8IZM0 81 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 CEND1Q8N111 149 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 DIRC1Q969H9 104 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 HIST1H4GQ99525 98 aa4.72□□□□□ -1.65
HNRNPC-226ENST00000556628 SPANXB1Q9NS25 103 aaPredicted RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms