RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 PLAC8Q9NZF1 115 aa7.16□□□□□ -1.26
FOXN3-212ENST00000556541 GAGE2BQ13066 116 aa7.15□□□□□ -1.26
FOXN3-212ENST00000556541 C9orf129Q5T035 196 aaKnown RBP7.15□□□□□ -1.26
FOXN3-212ENST00000556541 C14orf144Q96I85 54 aa7.15□□□□□ -1.26
FOXN3-212ENST00000556541 UQCR10Q9UDW1 63 aa7.15□□□□□ -1.26
FOXN3-212ENST00000556541 TP73-AS1Q9UF72 201 aa7.15□□□□□ -1.26
FOXN3-212ENST00000556541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.15□□□□□ -1.26
FOXN3-212ENST00000556541 ABCA13Q86UQ4 5058 aa7.14□□□□□ -1.27
FOXN3-212ENST00000556541 CDK2AP2O75956 126 aa7.14□□□□□ -1.27
FOXN3-212ENST00000556541 NDUFC2O95298 119 aa7.14□□□□□ -1.27
FOXN3-212ENST00000556541 DYNC1H1Q14204 4646 aaKnown RBP7.14□□□□□ -1.27
FOXN3-212ENST00000556541 GAGE2EQ4V326 116 aa7.14□□□□□ -1.27
FOXN3-212ENST00000556541 ADAMTSL4-AS1Q5T5F5 129 aa7.14□□□□□ -1.27
FOXN3-212ENST00000556541 LINC00518Q8N0U6 118 aa7.14□□□□□ -1.27
FOXN3-212ENST00000556541 C12orf57Q99622 126 aa7.14□□□□□ -1.27
FOXN3-212ENST00000556541 GAGE2DQ9UEU5 116 aa7.14□□□□□ -1.27
FOXN3-212ENST00000556541 DNAH8Q96JB1 4490 aa7.13□□□□□ -1.27
FOXN3-212ENST00000556541 IGKV2-24A0A0C4DH68 120 aa7.13□□□□□ -1.27
FOXN3-212ENST00000556541 CHTF8P0CG12 524 aa7.13□□□□□ -1.27
FOXN3-212ENST00000556541 RPL24P83731 157 aaKnown RBP7.13□□□□□ -1.27
FOXN3-212ENST00000556541 TAL2Q16559 108 aa7.13□□□□□ -1.27
FOXN3-212ENST00000556541 FAM30AQ9NZY2 134 aa7.13□□□□□ -1.27
FOXN3-212ENST00000556541 A0A087WYN8 130 aa7.12□□□□□ -1.27
FOXN3-212ENST00000556541 PANO1I0J062 215 aa7.12□□□□□ -1.27
FOXN3-212ENST00000556541 C2orf91Q6ZV80 131 aa7.12□□□□□ -1.27
FOXN3-212ENST00000556541 LINC00308Q8TCZ7 52 aa7.12□□□□□ -1.27
FOXN3-212ENST00000556541 MIEN1Q9BRT3 115 aa7.12□□□□□ -1.27
FOXN3-212ENST00000556541 XAGE1AQ9HD64 81 aa7.12□□□□□ -1.27
FOXN3-212ENST00000556541 LRP1BQ9NZR2 4599 aa7.11□□□□□ -1.27
FOXN3-212ENST00000556541 TRBV10-2A0A0K0K1G8 114 aa7.11□□□□□ -1.27
FOXN3-212ENST00000556541 VPREB1P12018 145 aa7.11□□□□□ -1.27
FOXN3-212ENST00000556541 A0A0U1RRA0 63 aa7.1□□□□□ -1.27
FOXN3-212ENST00000556541 SMCPP49901 116 aaPredicted RBP7.1□□□□□ -1.27
FOXN3-212ENST00000556541 SOSTDC1Q6X4U4 206 aa7.1□□□□□ -1.27
FOXN3-212ENST00000556541 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
FOXN3-212ENST00000556541 KRTAP7-1Q8IUC3 87 aa7.1□□□□□ -1.27
FOXN3-212ENST00000556541 CIRBP-AS1Q8TBR5 109 aa7.1□□□□□ -1.27
FOXN3-212ENST00000556541 A0A1W2PNN7 141 aa7.09□□□□□ -1.27
FOXN3-212ENST00000556541 TSTD3H0UI37 97 aa7.09□□□□□ -1.27
FOXN3-212ENST00000556541 XGP55808 180 aa7.09□□□□□ -1.27
FOXN3-212ENST00000556541 SRSF9Q13242 221 aaKnown RBP eCLIP7.09□□□□□ -1.27
FOXN3-212ENST00000556541 LBHQ53QV2 105 aaPredicted RBP7.09□□□□□ -1.27
FOXN3-212ENST00000556541 DAND5Q8N907 189 aa7.09□□□□□ -1.27
FOXN3-212ENST00000556541 SERTAD4-AS1Q5TG53 156 aa7.08□□□□□ -1.28
FOXN3-212ENST00000556541 FAM168BA1KXE4 195 aa7.07□□□□□ -1.28
FOXN3-212ENST00000556541 M0QXV9 152 aa7.07□□□□□ -1.28
FOXN3-212ENST00000556541 M0R378 163 aa7.07□□□□□ -1.28
FOXN3-212ENST00000556541 EIF4EBP3O60516 100 aaPredicted RBP7.07□□□□□ -1.28
FOXN3-212ENST00000556541 HSD52Q0P140 79 aa7.07□□□□□ -1.28
FOXN3-212ENST00000556541 MUSTN1Q8IVN3 82 aa7.07□□□□□ -1.28
FOXN3-212ENST00000556541 NKAPP1Q8N9T2 125 aa7.07□□□□□ -1.28
FOXN3-212ENST00000556541 DPH3Q96FX2 82 aa7.07□□□□□ -1.28
FOXN3-212ENST00000556541 HIST1H4GQ99525 98 aa7.07□□□□□ -1.28
FOXN3-212ENST00000556541 C22orf24Q9Y442 160 aa7.07□□□□□ -1.28
FOXN3-212ENST00000556541 HNRNPA3P51991 378 aaKnown RBP7.06□□□□□ -1.28
FOXN3-212ENST00000556541 FAM19A5Q7Z5A7 132 aaPredicted RBP7.06□□□□□ -1.28
FOXN3-212ENST00000556541 MRPL55Q7Z7F7 128 aaKnown RBP7.06□□□□□ -1.28
FOXN3-212ENST00000556541 Q8NDZ9 215 aa7.06□□□□□ -1.28
FOXN3-212ENST00000556541 CBY1Q9Y3M2 126 aa7.06□□□□□ -1.28
FOXN3-212ENST00000556541 TMEM238LA0A1B0GVL6 79 aa7.04□□□□□ -1.28
FOXN3-212ENST00000556541 CEND1Q8N111 149 aa7.04□□□□□ -1.28
FOXN3-212ENST00000556541 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
FOXN3-212ENST00000556541 PRO1933Q9H354 126 aa7.04□□□□□ -1.28
FOXN3-212ENST00000556541 APOBP04114 4563 aaKnown RBP7.04□□□□□ -1.28
FOXN3-212ENST00000556541 IGKV2-28A0A075B6P5 120 aa7.03□□□□□ -1.28
FOXN3-212ENST00000556541 IGKV2D-28P01615 120 aa7.03□□□□□ -1.28
FOXN3-212ENST00000556541 IGLV6-57P01721 117 aa7.03□□□□□ -1.28
FOXN3-212ENST00000556541 NPC2P61916 151 aa7.03□□□□□ -1.28
FOXN3-212ENST00000556541 LINC00167Q96N53 147 aa7.03□□□□□ -1.28
FOXN3-212ENST00000556541 IGLV1-50A0A075B6I6 118 aa7.02□□□□□ -1.29
FOXN3-212ENST00000556541 TRAV13-2A0A0B4J235 113 aa7.02□□□□□ -1.29
FOXN3-212ENST00000556541 A4D1N5 150 aa7.02□□□□□ -1.29
FOXN3-212ENST00000556541 PHF5AQ7RTV0 110 aaKnown RBP7.02□□□□□ -1.29
FOXN3-212ENST00000556541 TMEM126AQ9H061 195 aa7.02□□□□□ -1.29
FOXN3-212ENST00000556541 A0A0B4J2C4 111 aa7.01□□□□□ -1.29
FOXN3-212ENST00000556541 PRYO14603 147 aa7.01□□□□□ -1.29
FOXN3-212ENST00000556541 KRTAP4-5Q9BYR2 181 aa7.01□□□□□ -1.29
FOXN3-212ENST00000556541 KCNQ1DNQ9H478 68 aa7.01□□□□□ -1.29
FOXN3-212ENST00000556541 A0A1B0GWB2 263 aa7□□□□□ -1.29
FOXN3-212ENST00000556541 M0R143 59 aa7□□□□□ -1.29
FOXN3-212ENST00000556541 LINC00337Q8N6G1 96 aa7□□□□□ -1.29
FOXN3-212ENST00000556541 NCR3O14931 201 aa6.99□□□□□ -1.29
FOXN3-212ENST00000556541 DDTP30046 118 aa6.99□□□□□ -1.29
FOXN3-212ENST00000556541 SPRR1AP35321 89 aa6.99□□□□□ -1.29
FOXN3-212ENST00000556541 UBE2BP63146 152 aa6.99□□□□□ -1.29
FOXN3-212ENST00000556541 PRR3P79522 188 aaKnown RBP6.99□□□□□ -1.29
FOXN3-212ENST00000556541 TRBV10-3A0A0K0K1G6 114 aa6.98□□□□□ -1.29
FOXN3-212ENST00000556541 FXYD2P54710 66 aa6.98□□□□□ -1.29
FOXN3-212ENST00000556541 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
FOXN3-212ENST00000556541 CFC1BP0CG36 223 aa6.97□□□□□ -1.29
FOXN3-212ENST00000556541 CFC1P0CG37 223 aa6.97□□□□□ -1.29
FOXN3-212ENST00000556541 CTAG1AP78358 180 aa6.97□□□□□ -1.29
FOXN3-212ENST00000556541 HSPG2P98160 4391 aa6.96□□□□□ -1.29
FOXN3-212ENST00000556541 TRBV7-6A0A0J9YX20 115 aa6.96□□□□□ -1.3
FOXN3-212ENST00000556541 KRTAP4-16G5E9R7 235 aaPredicted RBP6.96□□□□□ -1.3
FOXN3-212ENST00000556541 H0Y9J4 135 aa6.96□□□□□ -1.3
FOXN3-212ENST00000556541 HAMPP81172 84 aa6.96□□□□□ -1.3
FOXN3-212ENST00000556541 BVES-AS1Q5T3Y7 98 aa6.96□□□□□ -1.3
FOXN3-212ENST00000556541 REG3GQ6UW15 175 aa6.96□□□□□ -1.3
FOXN3-212ENST00000556541 KRTAP11-1Q8IUC1 163 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 302.2 ms