RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 MRPL55Q7Z7F7 128 aaKnown RBP10.51□□□□□ -0.73
PSEN1-217ENST00000556533 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
PSEN1-217ENST00000556533 RPL37AP8A6NKH3 93 aa10.5□□□□□ -0.73
PSEN1-217ENST00000556533 J3QQQ9 107 aa10.5□□□□□ -0.73
PSEN1-217ENST00000556533 C3orf79P0CE67 100 aa10.5□□□□□ -0.73
PSEN1-217ENST00000556533 HERV-K104P63124 156 aa10.5□□□□□ -0.73
PSEN1-217ENST00000556533 SRSF9Q13242 221 aaKnown RBP eCLIP10.5□□□□□ -0.73
PSEN1-217ENST00000556533 PLA2G2DQ9UNK4 145 aa10.5□□□□□ -0.73
PSEN1-217ENST00000556533 LGALS3P17931 250 aaKnown RBP10.49□□□□□ -0.73
PSEN1-217ENST00000556533 LINC00167Q96N53 147 aa10.49□□□□□ -0.73
PSEN1-217ENST00000556533 TP73-AS1Q9UF72 201 aa10.49□□□□□ -0.73
PSEN1-217ENST00000556533 IGLV7-43P04211 117 aa10.48□□□□□ -0.73
PSEN1-217ENST00000556533 LINC01545Q5VT33 79 aa10.48□□□□□ -0.73
PSEN1-217ENST00000556533 LRP1Q07954 4544 aaKnown RBP10.46□□□□□ -0.73
PSEN1-217ENST00000556533 IGLV5-37A0A075B6J1 123 aa10.46□□□□□ -0.73
PSEN1-217ENST00000556533 LINC00587B1AMM8 73 aa10.46□□□□□ -0.73
PSEN1-217ENST00000556533 RPL24P83731 157 aaKnown RBP10.46□□□□□ -0.73
PSEN1-217ENST00000556533 FAT3Q8TDW7 4589 aa10.45□□□□□ -0.74
PSEN1-217ENST00000556533 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
PSEN1-217ENST00000556533 REG3GQ6UW15 175 aa10.45□□□□□ -0.74
PSEN1-217ENST00000556533 MIR7-3HGQ8N6C7 128 aa10.45□□□□□ -0.74
PSEN1-217ENST00000556533 VPREB1P12018 145 aa10.44□□□□□ -0.74
PSEN1-217ENST00000556533 C20orf202A1L168 122 aa10.43□□□□□ -0.74
PSEN1-217ENST00000556533 E9PLD3 99 aa10.43□□□□□ -0.74
PSEN1-217ENST00000556533 NMUP48645 174 aa10.43□□□□□ -0.74
PSEN1-217ENST00000556533 Q8NDZ9 215 aa10.43□□□□□ -0.74
PSEN1-217ENST00000556533 HERC1Q15751 4861 aa10.42□□□□□ -0.74
PSEN1-217ENST00000556533 IGKV2-28A0A075B6P5 120 aa10.42□□□□□ -0.74
PSEN1-217ENST00000556533 IGKV2D-28P01615 120 aa10.42□□□□□ -0.74
PSEN1-217ENST00000556533 S100A6P06703 90 aa10.42□□□□□ -0.74
PSEN1-217ENST00000556533 S100A2P29034 98 aa10.42□□□□□ -0.74
PSEN1-217ENST00000556533 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
PSEN1-217ENST00000556533 DAND5Q8N907 189 aa10.42□□□□□ -0.74
PSEN1-217ENST00000556533 DIRC1Q969H9 104 aa10.42□□□□□ -0.74
PSEN1-217ENST00000556533 HIST3H2BBQ8N257 126 aa10.41□□□□□ -0.74
PSEN1-217ENST00000556533 BCE1O60756 84 aa10.39□□□□□ -0.75
PSEN1-217ENST00000556533 ATOH7Q8N100 152 aa10.39□□□□□ -0.75
PSEN1-217ENST00000556533 LINC01600Q96MT4 127 aa10.38□□□□□ -0.75
PSEN1-217ENST00000556533 HIST1H2BLQ99880 126 aa10.38□□□□□ -0.75
PSEN1-217ENST00000556533 IGLV1-50A0A075B6I6 118 aa10.37□□□□□ -0.75
PSEN1-217ENST00000556533 A0A0J9YXY3 114 aa10.37□□□□□ -0.75
PSEN1-217ENST00000556533 H0Y9J4 135 aa10.37□□□□□ -0.75
PSEN1-217ENST00000556533 NCR3O14931 201 aa10.37□□□□□ -0.75
PSEN1-217ENST00000556533 ZNF861PO60384 105 aa10.37□□□□□ -0.75
PSEN1-217ENST00000556533 MT1HL1P0DM35 61 aa10.37□□□□□ -0.75
PSEN1-217ENST00000556533 IGKV2D-26A0A0A0MRZ7 120 aa10.36□□□□□ -0.75
PSEN1-217ENST00000556533 TMEM238C9JI98 176 aa10.36□□□□□ -0.75
PSEN1-217ENST00000556533 M0R378 163 aa10.36□□□□□ -0.75
PSEN1-217ENST00000556533 SNRPEP62304 92 aaKnown RBP10.36□□□□□ -0.75
PSEN1-217ENST00000556533 ZNF815PA8K554 130 aa10.35□□□□□ -0.75
PSEN1-217ENST00000556533 RPL28P46779 137 aaKnown RBP10.35□□□□□ -0.75
PSEN1-217ENST00000556533 UBE2AP49459 152 aa10.35□□□□□ -0.75
PSEN1-217ENST00000556533 MIEN1Q9BRT3 115 aa10.35□□□□□ -0.75
PSEN1-217ENST00000556533 NPC2P61916 151 aa10.34□□□□□ -0.75
PSEN1-217ENST00000556533 ADAMTSL4-AS1Q5T5F5 129 aa10.34□□□□□ -0.75
PSEN1-217ENST00000556533 TTTY13Q9BZ97 58 aa10.34□□□□□ -0.75
PSEN1-217ENST00000556533 ANKRD39Q53RE8 183 aa10.33□□□□□ -0.76
PSEN1-217ENST00000556533 TMEM126AQ9H061 195 aa10.33□□□□□ -0.76
PSEN1-217ENST00000556533 AKR1D1P51857 326 aa10.32□□□□□ -0.76
PSEN1-217ENST00000556533 FAM19A1Q7Z5A9 133 aa10.32□□□□□ -0.76
PSEN1-217ENST00000556533 TMA7Q9Y2S6 64 aaKnown RBP10.32□□□□□ -0.76
PSEN1-217ENST00000556533 LOC107984156A0A0G2JMH3 177 aa10.29□□□□□ -0.76
PSEN1-217ENST00000556533 KRTAP10-8P60410 259 aa10.29□□□□□ -0.76
PSEN1-217ENST00000556533 PRLHP81277 87 aa10.29□□□□□ -0.76
PSEN1-217ENST00000556533 ARL17AQ8IVW1 177 aa10.29□□□□□ -0.76
PSEN1-217ENST00000556533 PRR26Q8N8Z3 221 aa10.29□□□□□ -0.76
PSEN1-217ENST00000556533 EIF4EBP3O60516 100 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-217ENST00000556533 SOSTDC1Q6X4U4 206 aa10.28□□□□□ -0.76
PSEN1-217ENST00000556533 TRBV10-3A0A0K0K1G6 114 aa10.27□□□□□ -0.77
PSEN1-217ENST00000556533 C5orf52A6NGY3 159 aa10.27□□□□□ -0.77
PSEN1-217ENST00000556533 SCGB1D4Q6XE38 83 aa10.27□□□□□ -0.77
PSEN1-217ENST00000556533 LITAFQ99732 161 aa10.27□□□□□ -0.77
PSEN1-217ENST00000556533 TIMM17BO60830 172 aa10.26□□□□□ -0.77
PSEN1-217ENST00000556533 SCGB1D1O95968 90 aa10.26□□□□□ -0.77
PSEN1-217ENST00000556533 KRTAP13-1Q8IUC0 172 aa10.26□□□□□ -0.77
PSEN1-217ENST00000556533 PCP2Q8IVA1 136 aa10.26□□□□□ -0.77
PSEN1-217ENST00000556533 SPANXB1Q9NS25 103 aaPredicted RBP10.26□□□□□ -0.77
PSEN1-217ENST00000556533 HSBP1L1C9JCN9 74 aa10.25□□□□□ -0.77
PSEN1-217ENST00000556533 PRYO14603 147 aa10.25□□□□□ -0.77
PSEN1-217ENST00000556533 KRTAP1-4P0C5Y4 121 aa10.25□□□□□ -0.77
PSEN1-217ENST00000556533 DDTP30046 118 aa10.25□□□□□ -0.77
PSEN1-217ENST00000556533 S100A12P80511 92 aa10.25□□□□□ -0.77
PSEN1-217ENST00000556533 S100A7L2Q5SY68 101 aa10.25□□□□□ -0.77
PSEN1-217ENST00000556533 LINC00308Q8TCZ7 52 aa10.25□□□□□ -0.77
PSEN1-217ENST00000556533 TRBV10-2A0A0K0K1G8 114 aa10.24□□□□□ -0.77
PSEN1-217ENST00000556533 NDUFC2O95298 119 aa10.24□□□□□ -0.77
PSEN1-217ENST00000556533 KCNQ1DNQ9H478 68 aa10.24□□□□□ -0.77
PSEN1-217ENST00000556533 ETDCA0A1B0GVM5 59 aa10.22□□□□□ -0.77
PSEN1-217ENST00000556533 HIGD2AQ9BW72 106 aa10.22□□□□□ -0.77
PSEN1-217ENST00000556533 TNXBP22105 4242 aa10.22□□□□□ -0.77
PSEN1-217ENST00000556533 ANAPC11Q9NYG5 84 aa10.21□□□□□ -0.77
PSEN1-217ENST00000556533 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
PSEN1-217ENST00000556533 OR13C6PQ8NH95 151 aa10.19□□□□□ -0.78
PSEN1-217ENST00000556533 SPANXCQ9NY87 97 aa10.19□□□□□ -0.78
PSEN1-217ENST00000556533 IGLV6-57P01721 117 aa10.18□□□□□ -0.78
PSEN1-217ENST00000556533 SPANXDQ9BXN6 97 aa10.18□□□□□ -0.78
PSEN1-217ENST00000556533 SPRR1AP35321 89 aa10.17□□□□□ -0.78
PSEN1-217ENST00000556533 RPL13AP40429 203 aaKnown RBP10.17□□□□□ -0.78
PSEN1-217ENST00000556533 CRYGAP11844 174 aa10.16□□□□□ -0.78
PSEN1-217ENST00000556533 TRAV23DV6A0A075B6W5 121 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms