RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 NBEAL2Q6ZNJ1 2754 aa3.59□□□□□ -1.83
TMEM260-210ENST00000556422 K7EQD1 137 aa3.59□□□□□ -1.83
TMEM260-210ENST00000556422 MIFP14174 115 aa3.59□□□□□ -1.83
TMEM260-210ENST00000556422 FAM104AQ969W3 186 aa3.59□□□□□ -1.83
TMEM260-210ENST00000556422 LINC00467Q9BRT7 94 aa3.59□□□□□ -1.83
TMEM260-210ENST00000556422 KRTAP10-3P60369 221 aa3.59□□□□□ -1.83
TMEM260-210ENST00000556422 PLA2G2DQ9UNK4 145 aa3.59□□□□□ -1.83
TMEM260-210ENST00000556422 ATRQ13535 2644 aa3.59□□□□□ -1.84
TMEM260-210ENST00000556422 IGHV3-73A0A0B4J1V6 119 aa3.59□□□□□ -1.84
TMEM260-210ENST00000556422 TRBV30A0A0K0K1B3 111 aa3.59□□□□□ -1.84
TMEM260-210ENST00000556422 LEPROTO15243 131 aa3.59□□□□□ -1.84
TMEM260-210ENST00000556422 GIG44P09565 113 aaPredicted RBP3.59□□□□□ -1.84
TMEM260-210ENST00000556422 KLKP1Q107X0 134 aa3.59□□□□□ -1.84
TMEM260-210ENST00000556422 C19orf73Q9NVV2 129 aa3.59□□□□□ -1.84
TMEM260-210ENST00000556422 IGHV6-1A0A0B4J1U7 121 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 BAALC-AS2P0C853 105 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 WFDC10AQ9H1F0 79 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 UBE2D4Q9Y2X8 147 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 ICOSQ9Y6W8 199 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 C11orf86A6NJI1 115 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 INSP01308 110 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 IGLV1-51P01701 117 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 SYCNQ0VAF6 134 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 C20orf203Q8NBC4 194 aa3.58□□□□□ -1.84
TMEM260-210ENST00000556422 IBA57-AS1B1ANH7 110 aa3.57□□□□□ -1.84
TMEM260-210ENST00000556422 I3L3M4 83 aa3.57□□□□□ -1.84
TMEM260-210ENST00000556422 LY6G6DO95868 133 aa3.57□□□□□ -1.84
TMEM260-210ENST00000556422 Q75L30 129 aa3.57□□□□□ -1.84
TMEM260-210ENST00000556422 LINC01600Q96MT4 127 aa3.57□□□□□ -1.84
TMEM260-210ENST00000556422 IGHV3-53P01767 116 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 TSPEAR-AS2P59090 65 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 RNASE13Q5GAN3 156 aaKnown RBP3.56□□□□□ -1.84
TMEM260-210ENST00000556422 IGLV4-3A0A075B6K6 122 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 TRAV22A0A0B4J277 110 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 ENHOQ6UWT2 76 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 CMYA5Q8N3K9 4069 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 Q1T7F1 81 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 CSNK1G2-AS1Q8NCQ2 148 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 AMELXQ99217 191 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 CHCHD7Q9BUK0 85 aa3.56□□□□□ -1.84
TMEM260-210ENST00000556422 IGHV3OR16-12A0A075B7B8 117 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 WFDC9Q8NEX5 89 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 PKD1L1Q8TDX9 2849 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 A0A0J9YY99 117 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 IGHV3-30P01768 117 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 IGHV3-30-5P0DP03 117 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 TNP2Q05952 138 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 ATP5EP2Q5VTU8 51 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 REG3GQ6UW15 175 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 Q6ZTI0 123 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 TMEM263Q8WUH6 116 aaKnown RBP3.55□□□□□ -1.84
TMEM260-210ENST00000556422 INAFM1C9JVW0 142 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 PRB2P02812 416 aaPredicted RBP3.55□□□□□ -1.84
TMEM260-210ENST00000556422 RPL28P46779 137 aaKnown RBP3.55□□□□□ -1.84
TMEM260-210ENST00000556422 UBL5Q9BZL1 73 aa3.55□□□□□ -1.84
TMEM260-210ENST00000556422 IGHV3-38A0A0C4DH36 116 aa3.54□□□□□ -1.84
TMEM260-210ENST00000556422 C16orf90A8MZG2 172 aa3.54□□□□□ -1.84
TMEM260-210ENST00000556422 LINC00528Q8N1L1 170 aa3.54□□□□□ -1.84
TMEM260-210ENST00000556422 TRGV1A0A0A0MS02 117 aa3.54□□□□□ -1.84
TMEM260-210ENST00000556422 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.53□□□□□ -1.84
TMEM260-210ENST00000556422 IGKV2-29A2NJV5 120 aaPredicted RBP3.53□□□□□ -1.84
TMEM260-210ENST00000556422 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
TMEM260-210ENST00000556422 BCE1O60756 84 aa3.53□□□□□ -1.84
TMEM260-210ENST00000556422 ADAMTSL4-AS1Q5T5F5 129 aa3.53□□□□□ -1.84
TMEM260-210ENST00000556422 ZNF625Q96I27 306 aaPredicted RBP3.53□□□□□ -1.84
TMEM260-210ENST00000556422 LINC00846Q9NV44 126 aa3.53□□□□□ -1.84
TMEM260-210ENST00000556422 FBN1P35555 2871 aaKnown RBP3.53□□□□□ -1.84
TMEM260-210ENST00000556422 IGHV3OR16-9A0A0B4J2B5 98 aa3.53□□□□□ -1.84
TMEM260-210ENST00000556422 C9orf116Q5BN46 136 aaPredicted RBP3.53□□□□□ -1.84
TMEM260-210ENST00000556422 NTM-AS1Q6ZSK4 140 aa3.53□□□□□ -1.84
TMEM260-210ENST00000556422 NOP10Q9NPE3 64 aaKnown RBP3.53□□□□□ -1.84
TMEM260-210ENST00000556422 C14orf132Q9NPU4 83 aa3.53□□□□□ -1.84
TMEM260-210ENST00000556422 A6NN06 94 aa3.52□□□□□ -1.85
TMEM260-210ENST00000556422 PRR15LQ9BU68 103 aa3.52□□□□□ -1.85
TMEM260-210ENST00000556422 SND1-IT1Q9HBX3 110 aa3.52□□□□□ -1.85
TMEM260-210ENST00000556422 STAB1Q9NY15 2570 aa3.52□□□□□ -1.85
TMEM260-210ENST00000556422 CRPP02741 224 aa3.52□□□□□ -1.85
TMEM260-210ENST00000556422 PRR3P79522 188 aaKnown RBP3.52□□□□□ -1.85
TMEM260-210ENST00000556422 Q6ZRP5 223 aa3.52□□□□□ -1.85
TMEM260-210ENST00000556422 CHCHD10Q8WYQ3 142 aaPredicted RBP3.52□□□□□ -1.85
TMEM260-210ENST00000556422 A8MU10 97 aa3.52□□□□□ -1.85
TMEM260-210ENST00000556422 CMC4P56277 68 aaPredicted RBP3.52□□□□□ -1.85
TMEM260-210ENST00000556422 TMEM254Q8TBM7 123 aa3.52□□□□□ -1.85
TMEM260-210ENST00000556422 C16orf74Q96GX8 76 aa3.52□□□□□ -1.85
TMEM260-210ENST00000556422 IGHV3-64A0A075B6Q5 118 aa3.51□□□□□ -1.85
TMEM260-210ENST00000556422 LCE2CQ5TA81 110 aa3.51□□□□□ -1.85
TMEM260-210ENST00000556422 TRBV10-1A0A0K0K1A3 114 aa3.51□□□□□ -1.85
TMEM260-210ENST00000556422 HAMPP81172 84 aa3.51□□□□□ -1.85
TMEM260-210ENST00000556422 KIAA0087Q14695 138 aa3.51□□□□□ -1.85
TMEM260-210ENST00000556422 CASC2Q6XLA1 102 aa3.51□□□□□ -1.85
TMEM260-210ENST00000556422 DNAH3Q8TD57 4116 aa3.51□□□□□ -1.85
TMEM260-210ENST00000556422 C3orf84H3BNL1 204 aa3.51□□□□□ -1.85
TMEM260-210ENST00000556422 IGHV3-30-3P0DP02 117 aa3.51□□□□□ -1.85
TMEM260-210ENST00000556422 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
TMEM260-210ENST00000556422 EIF4EBP3O60516 100 aaPredicted RBP3.5□□□□□ -1.85
TMEM260-210ENST00000556422 IGLV5-45A0A087WSX0 123 aa3.5□□□□□ -1.85
TMEM260-210ENST00000556422 LITAFQ99732 161 aa3.5□□□□□ -1.85
TMEM260-210ENST00000556422 SEC61BP60468 96 aaKnown RBP3.49□□□□□ -1.85
TMEM260-210ENST00000556422 RPL36AP83881 106 aaKnown RBP3.49□□□□□ -1.85
TMEM260-210ENST00000556422 COX6A2Q02221 97 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms