RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 C1orf137Q5JT78 98 aa10.36□□□□□ -0.75
ARHGEF40-207ENST00000556399 C10orf25Q5T742 122 aa10.35□□□□□ -0.75
ARHGEF40-207ENST00000556399 TRAV10A0A0B4J240 114 aa10.35□□□□□ -0.75
ARHGEF40-207ENST00000556399 LYPD5Q6UWN5 251 aa10.35□□□□□ -0.75
ARHGEF40-207ENST00000556399 Q6ZQT0 140 aa10.35□□□□□ -0.75
ARHGEF40-207ENST00000556399 Q8N9L7 120 aa10.34□□□□□ -0.75
ARHGEF40-207ENST00000556399 Q6ZRU5 148 aa10.34□□□□□ -0.75
ARHGEF40-207ENST00000556399 ACANP16112 2415 aa10.34□□□□□ -0.75
ARHGEF40-207ENST00000556399 RETNQ9HD89 108 aa10.33□□□□□ -0.76
ARHGEF40-207ENST00000556399 NANOS2P60321 138 aaKnown RBP10.33□□□□□ -0.76
ARHGEF40-207ENST00000556399 SPEGQ15772 3267 aa10.32□□□□□ -0.76
ARHGEF40-207ENST00000556399 Q6ZTC4 211 aa10.31□□□□□ -0.76
ARHGEF40-207ENST00000556399 OXLD1Q5BKU9 147 aa10.31□□□□□ -0.76
ARHGEF40-207ENST00000556399 X6R8D5 127 aa10.31□□□□□ -0.76
ARHGEF40-207ENST00000556399 LRCOL1A6NCL2 159 aa10.31□□□□□ -0.76
ARHGEF40-207ENST00000556399 C4orf26Q17RF5 130 aa10.31□□□□□ -0.76
ARHGEF40-207ENST00000556399 A0A0J9YWU9 116 aa10.3□□□□□ -0.76
ARHGEF40-207ENST00000556399 C2orf48Q96LS8 159 aa10.3□□□□□ -0.76
ARHGEF40-207ENST00000556399 C6orf48Q9UBA6 75 aa10.3□□□□□ -0.76
ARHGEF40-207ENST00000556399 LINC01600Q96MT4 127 aa10.3□□□□□ -0.76
ARHGEF40-207ENST00000556399 LOC110117498A0A087WWA1 95 aa10.3□□□□□ -0.76
ARHGEF40-207ENST00000556399 BCE1O60756 84 aa10.3□□□□□ -0.76
ARHGEF40-207ENST00000556399 TRBV7-6A0A0J9YX20 115 aa10.3□□□□□ -0.76
ARHGEF40-207ENST00000556399 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF40-207ENST00000556399 FRYQ5TBA9 3013 aa10.28□□□□□ -0.76
ARHGEF40-207ENST00000556399 A6NED7 52 aa10.28□□□□□ -0.76
ARHGEF40-207ENST00000556399 C7orf33Q8WU49 177 aa10.27□□□□□ -0.76
ARHGEF40-207ENST00000556399 FAM104AQ969W3 186 aa10.27□□□□□ -0.76
ARHGEF40-207ENST00000556399 FRYLO94915 3013 aa10.26□□□□□ -0.77
ARHGEF40-207ENST00000556399 C9orf129Q5T035 196 aaKnown RBP10.26□□□□□ -0.77
ARHGEF40-207ENST00000556399 PMAIP1Q13794 54 aa10.26□□□□□ -0.77
ARHGEF40-207ENST00000556399 SEC61GP60059 68 aa10.25□□□□□ -0.77
ARHGEF40-207ENST00000556399 IGKV4-1P06312 121 aa10.25□□□□□ -0.77
ARHGEF40-207ENST00000556399 ELOF1P60002 83 aaKnown RBP10.25□□□□□ -0.77
ARHGEF40-207ENST00000556399 CSNK1G2-AS1Q8NCQ2 148 aa10.24□□□□□ -0.77
ARHGEF40-207ENST00000556399 KIAA0087Q14695 138 aa10.23□□□□□ -0.77
ARHGEF40-207ENST00000556399 PRO0628Q9UI54 55 aa10.23□□□□□ -0.77
ARHGEF40-207ENST00000556399 PLAC8L1A1L4L8 177 aa10.22□□□□□ -0.77
ARHGEF40-207ENST00000556399 F8WDY8 70 aa10.22□□□□□ -0.77
ARHGEF40-207ENST00000556399 GIG44P09565 113 aaPredicted RBP10.22□□□□□ -0.77
ARHGEF40-207ENST00000556399 REG3GQ6UW15 175 aa10.22□□□□□ -0.77
ARHGEF40-207ENST00000556399 A0A096LNT2 108 aa10.22□□□□□ -0.77
ARHGEF40-207ENST00000556399 TM2D3Q9BRN9 247 aa10.22□□□□□ -0.77
ARHGEF40-207ENST00000556399 LINC00208Q96KT6 92 aa10.21□□□□□ -0.77
ARHGEF40-207ENST00000556399 EPG5Q9HCE0 2579 aa10.2□□□□□ -0.78
ARHGEF40-207ENST00000556399 IGLV6-57P01721 117 aa10.2□□□□□ -0.78
ARHGEF40-207ENST00000556399 SMIM29Q86T20 159 aa10.19□□□□□ -0.78
ARHGEF40-207ENST00000556399 ESRGQ1W209 222 aa10.19□□□□□ -0.78
ARHGEF40-207ENST00000556399 DEFB116Q30KQ4 102 aa10.18□□□□□ -0.78
ARHGEF40-207ENST00000556399 PRR15LQ9BU68 103 aa10.18□□□□□ -0.78
ARHGEF40-207ENST00000556399 SPTBN5Q9NRC6 3674 aaKnown RBP10.18□□□□□ -0.78
ARHGEF40-207ENST00000556399 REV3LO60673 3130 aa10.17□□□□□ -0.78
ARHGEF40-207ENST00000556399 A0A087WSZ3 146 aa10.17□□□□□ -0.78
ARHGEF40-207ENST00000556399 ZNF292O60281 2723 aa10.17□□□□□ -0.78
ARHGEF40-207ENST00000556399 K7ERS5 55 aa10.16□□□□□ -0.78
ARHGEF40-207ENST00000556399 LY6G6CO95867 125 aa10.16□□□□□ -0.78
ARHGEF40-207ENST00000556399 GVQW2A0A096LPI5 108 aaPredicted RBP10.15□□□□□ -0.78
ARHGEF40-207ENST00000556399 HCG22E2RYF7 251 aa10.15□□□□□ -0.78
ARHGEF40-207ENST00000556399 PSPHP1O15172 72 aa10.14□□□□□ -0.79
ARHGEF40-207ENST00000556399 C19orf73Q9NVV2 129 aa10.14□□□□□ -0.79
ARHGEF40-207ENST00000556399 C22orf24Q9Y442 160 aa10.14□□□□□ -0.79
ARHGEF40-207ENST00000556399 Q8NAQ8 132 aa10.14□□□□□ -0.79
ARHGEF40-207ENST00000556399 ZNF706Q9Y5V0 76 aaPredicted RBP10.14□□□□□ -0.79
ARHGEF40-207ENST00000556399 NUPR2A6NF83 97 aa10.13□□□□□ -0.79
ARHGEF40-207ENST00000556399 AKAP13Q12802 2813 aa10.13□□□□□ -0.79
ARHGEF40-207ENST00000556399 CASC2Q6XLA1 102 aa10.12□□□□□ -0.79
ARHGEF40-207ENST00000556399 Q9BRP9 147 aa10.12□□□□□ -0.79
ARHGEF40-207ENST00000556399 VPREB1P12018 145 aa10.12□□□□□ -0.79
ARHGEF40-207ENST00000556399 LINC01556Q5JQF7 62 aa10.12□□□□□ -0.79
ARHGEF40-207ENST00000556399 LINC00474Q9P2X8 69 aa10.12□□□□□ -0.79
ARHGEF40-207ENST00000556399 FREM2Q5SZK8 3169 aa10.12□□□□□ -0.79
ARHGEF40-207ENST00000556399 IGLV9-49A0A0B4J1Y8 123 aa10.11□□□□□ -0.79
ARHGEF40-207ENST00000556399 OBSCN-AS1Q96MR7 158 aa10.11□□□□□ -0.79
ARHGEF40-207ENST00000556399 FASNP49327 2511 aaKnown RBP10.1□□□□□ -0.79
ARHGEF40-207ENST00000556399 LINC00167Q96N53 147 aa10.1□□□□□ -0.79
ARHGEF40-207ENST00000556399 PRLHP81277 87 aa10.1□□□□□ -0.79
ARHGEF40-207ENST00000556399 M0R2N4 97 aa10.09□□□□□ -0.79
ARHGEF40-207ENST00000556399 CENPEQ02224 2701 aa10.09□□□□□ -0.79
ARHGEF40-207ENST00000556399 H0Y9P7 68 aa10.08□□□□□ -0.8
ARHGEF40-207ENST00000556399 EYSQ5T1H1 3165 aa10.07□□□□□ -0.8
ARHGEF40-207ENST00000556399 Q6ZRP5 223 aa10.07□□□□□ -0.8
ARHGEF40-207ENST00000556399 Q6ZRX8 168 aa10.07□□□□□ -0.8
ARHGEF40-207ENST00000556399 LINC00612Q8N6U2 182 aa10.07□□□□□ -0.8
ARHGEF40-207ENST00000556399 KLKP1Q107X0 134 aa10.07□□□□□ -0.8
ARHGEF40-207ENST00000556399 Q8NBF4 154 aa10.07□□□□□ -0.8
ARHGEF40-207ENST00000556399 A0A1B0GW54 56 aa10.07□□□□□ -0.8
ARHGEF40-207ENST00000556399 H3BNG1 76 aa10.07□□□□□ -0.8
ARHGEF40-207ENST00000556399 MYO15AQ9UKN7 3530 aa10.06□□□□□ -0.8
ARHGEF40-207ENST00000556399 SPINK6Q6UWN8 80 aa10.06□□□□□ -0.8
ARHGEF40-207ENST00000556399 BOD1L1Q8NFC6 3051 aa10.06□□□□□ -0.8
ARHGEF40-207ENST00000556399 H7BZZ5 65 aa10.05□□□□□ -0.8
ARHGEF40-207ENST00000556399 ST20-AS1Q8NBB2 130 aa10.05□□□□□ -0.8
ARHGEF40-207ENST00000556399 COL6A3P12111 3177 aa10.05□□□□□ -0.8
ARHGEF40-207ENST00000556399 LINC00528Q8N1L1 170 aa10.04□□□□□ -0.8
ARHGEF40-207ENST00000556399 PRR34Q9NV39 138 aa10.04□□□□□ -0.8
ARHGEF40-207ENST00000556399 TRBV7-4A0A0J9YYF1 115 aa10.03□□□□□ -0.8
ARHGEF40-207ENST00000556399 MAP1AP78559 2803 aaPredicted RBP10.03□□□□□ -0.8
ARHGEF40-207ENST00000556399 hDV103S1A0JD37 113 aa10.02□□□□□ -0.8
ARHGEF40-207ENST00000556399 ERC2-IT1O76042 136 aa10.02□□□□□ -0.81
ARHGEF40-207ENST00000556399 PCOTHQ58A44 107 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms