RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 Q6ZRU5 148 aa2.97□□□□□ -1.93
ATXN3-237ENST00000556274 SCXQ7RTU7 201 aa2.97□□□□□ -1.93
ATXN3-237ENST00000556274 FAM19A2Q8N3H0 131 aa2.97□□□□□ -1.93
ATXN3-237ENST00000556274 CIRBP-AS1Q8TBR5 109 aa2.97□□□□□ -1.93
ATXN3-237ENST00000556274 FAM104AQ969W3 186 aa2.97□□□□□ -1.93
ATXN3-237ENST00000556274 CHAC1Q9BUX1 264 aa2.97□□□□□ -1.93
ATXN3-237ENST00000556274 HSPB8Q9UJY1 196 aa2.97□□□□□ -1.93
ATXN3-237ENST00000556274 RYR1P21817 5038 aa2.97□□□□□ -1.93
ATXN3-237ENST00000556274 DNAH17Q9UFH2 4485 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 IGHV3OR16-9A0A0B4J2B5 98 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 LOC107984640A0A0U1RRK4 108 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 LINC01549A6NIU2 74 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 NDUFA1O15239 70 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 HBDP02042 147 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 C3orf79P0CE67 100 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 UBE2D1P51668 147 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 HNRNPA3P51991 378 aaKnown RBP2.96□□□□□ -1.94
ATXN3-237ENST00000556274 KRTDAPP60985 99 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 CNBPP62633 177 aaKnown RBP2.96□□□□□ -1.94
ATXN3-237ENST00000556274 HERVK_113P63121 156 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 SEC11AP67812 179 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 SPATA45Q537H7 98 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 C2orf82Q6UX34 121 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 AMELXQ99217 191 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 TIMM17AQ99595 171 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 CST9LQ9H4G1 147 aa2.96□□□□□ -1.94
ATXN3-237ENST00000556274 A0A087WZ39 114 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 A0A096LNI7 61 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 KRTAP16-1A8MUX0 517 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 HSBP1L1C9JCN9 74 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 PANO1I0J062 215 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 ATP5LO75964 103 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 SPINK8P0C7L1 97 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 C9orf116Q5BN46 136 aaPredicted RBP2.95□□□□□ -1.94
ATXN3-237ENST00000556274 TMEM170BQ5T4T1 132 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 LINC00173Q6ZV60 143 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 C2orf48Q96LS8 159 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 MAP1LC3CQ9BXW4 147 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 CDKN2A-AS1Q9UH64 79 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 PKIGQ9Y2B9 76 aa2.95□□□□□ -1.94
ATXN3-237ENST00000556274 TINCRA0A1B0GVN0 87 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 LINC01546A6NGU7 62 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 H3BRM9 83 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 LEPROTL1O95214 131 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 RPL37AP61513 92 aaKnown RBP2.94□□□□□ -1.94
ATXN3-237ENST00000556274 COX7B2Q8TF08 81 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 C7orf33Q8WU49 177 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 IFI27L1Q96BM0 104 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 LINC00474Q9P2X8 69 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 CHTOPQ9Y3Y2 248 aaKnown RBP2.94□□□□□ -1.94
ATXN3-237ENST00000556274 HECTD4Q9Y4D8 3996 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 DNAH2Q9P225 4427 aa2.94□□□□□ -1.94
ATXN3-237ENST00000556274 SYS1-DBNDD2H3BUS1 97 aa2.93□□□□□ -1.94
ATXN3-237ENST00000556274 PFN2P35080 140 aa2.93□□□□□ -1.94
ATXN3-237ENST00000556274 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
ATXN3-237ENST00000556274 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
ATXN3-237ENST00000556274 Q6ZSA8 131 aa2.93□□□□□ -1.94
ATXN3-237ENST00000556274 FAM19A5Q7Z5A7 132 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-237ENST00000556274 ZNF625Q96I27 306 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-237ENST00000556274 C6orf48Q9UBA6 75 aa2.93□□□□□ -1.94
ATXN3-237ENST00000556274 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
ATXN3-237ENST00000556274 A0A096LNJ9 63 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 A0A0U1RRA0 63 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 FAM168BA1KXE4 195 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 F8WDY8 70 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 KRTAP10-5P60370 271 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 KIAA0087Q14695 138 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 Q8IZM0 81 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 LINC01561Q8N1V8 128 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 SPACA4Q8TDM5 124 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 XAGE1AQ9HD64 81 aa2.92□□□□□ -1.94
ATXN3-237ENST00000556274 MRPL35Q9NZE8 188 aaKnown RBP2.92□□□□□ -1.94
ATXN3-237ENST00000556274 FAT2Q9NYQ8 4349 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 TRBV30A0A0K0K1B3 111 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 A0A1W2PNN7 141 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 A6NDN8 102 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 C11orf86A6NJI1 115 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 KRTAP9-6A8MVA2 160 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 F8VRH5 84 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 COX8AP10176 69 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 LINC00158P58513 81 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 UBE2BP63146 152 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 BATFQ16520 125 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 PHF5AQ7RTV0 110 aaKnown RBP2.91□□□□□ -1.94
ATXN3-237ENST00000556274 FAM19A3Q7Z5A8 133 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 FAM218AQ96MZ4 157 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 PLAC8Q9NZF1 115 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 PKHD1P08F94 4074 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 HERC2O95714 4834 aa2.91□□□□□ -1.94
ATXN3-237ENST00000556274 FLG2Q5D862 2391 aaPredicted RBP2.9□□□□□ -1.94
ATXN3-237ENST00000556274 NDUFC2-KCTD14E9PQ53 114 aa2.9□□□□□ -1.95
ATXN3-237ENST00000556274 ZNF22P17026 224 aaPredicted RBP2.9□□□□□ -1.95
ATXN3-237ENST00000556274 C1orf137Q5JT78 98 aa2.9□□□□□ -1.95
ATXN3-237ENST00000556274 BVES-AS1Q5T3Y7 98 aa2.9□□□□□ -1.95
ATXN3-237ENST00000556274 GTF2H5Q6ZYL4 71 aa2.9□□□□□ -1.95
ATXN3-237ENST00000556274 Q8NBF4 154 aa2.9□□□□□ -1.95
ATXN3-237ENST00000556274 TRAV12-1A0A0B4J245 112 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms