RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 HSBP1O75506 76 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 HBDP02042 147 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 TSPEAR-AS2P59090 65 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 KRTDAPP60985 99 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 AMMECR1LQ6DCA0 310 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 C2orf66Q6UXQ4 117 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 FA2HQ7L5A8 372 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 OR5A1Q8NGJ0 315 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 C12orf57Q99622 126 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 RETNLBQ9BQ08 111 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 UBE2D4Q9Y2X8 147 aa3.98□□□□□ -1.77
ATXN3-236ENST00000556220 LINC00959A0A1B0GUT2 108 aa3.97□□□□□ -1.77
ATXN3-236ENST00000556220 H7C423 109 aa3.97□□□□□ -1.77
ATXN3-236ENST00000556220 SMIM6P0DI80 62 aa3.97□□□□□ -1.77
ATXN3-236ENST00000556220 RPL18AQ02543 176 aaKnown RBP3.97□□□□□ -1.77
ATXN3-236ENST00000556220 CD164L2Q6UWJ8 174 aa3.97□□□□□ -1.77
ATXN3-236ENST00000556220 IFI27L1Q96BM0 104 aa3.97□□□□□ -1.77
ATXN3-236ENST00000556220 CAMK2N2Q96S95 79 aa3.97□□□□□ -1.77
ATXN3-236ENST00000556220 AMELXQ99217 191 aa3.97□□□□□ -1.77
ATXN3-236ENST00000556220 PRO1933Q9H354 126 aa3.97□□□□□ -1.77
ATXN3-236ENST00000556220 NXT2Q9NPJ8 142 aaKnown RBP3.97□□□□□ -1.77
ATXN3-236ENST00000556220 A0A087X002 238 aa3.96□□□□□ -1.78
ATXN3-236ENST00000556220 FAM168BA1KXE4 195 aa3.96□□□□□ -1.78
ATXN3-236ENST00000556220 C11orf86A6NJI1 115 aa3.96□□□□□ -1.78
ATXN3-236ENST00000556220 LINC00587B1AMM8 73 aa3.96□□□□□ -1.78
ATXN3-236ENST00000556220 I3L3M4 83 aa3.96□□□□□ -1.78
ATXN3-236ENST00000556220 ZNF861PO60384 105 aa3.96□□□□□ -1.78
ATXN3-236ENST00000556220 LEPROTL1O95214 131 aa3.96□□□□□ -1.78
ATXN3-236ENST00000556220 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
ATXN3-236ENST00000556220 C2orf48Q96LS8 159 aa3.96□□□□□ -1.78
ATXN3-236ENST00000556220 MRPL35Q9NZE8 188 aaKnown RBP3.96□□□□□ -1.78
ATXN3-236ENST00000556220 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
ATXN3-236ENST00000556220 SS18Q15532 418 aa3.95□□□□□ -1.78
ATXN3-236ENST00000556220 C2orf91Q6ZV80 131 aa3.95□□□□□ -1.78
ATXN3-236ENST00000556220 KRTAP4-1Q9BYQ7 146 aa3.95□□□□□ -1.78
ATXN3-236ENST00000556220 CST9LQ9H4G1 147 aa3.95□□□□□ -1.78
ATXN3-236ENST00000556220 H0Y8G0 127 aa3.94□□□□□ -1.78
ATXN3-236ENST00000556220 ZNF25P17030 456 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-236ENST00000556220 S100A2P29034 98 aa3.94□□□□□ -1.78
ATXN3-236ENST00000556220 UBE2BP63146 152 aa3.94□□□□□ -1.78
ATXN3-236ENST00000556220 ASB16-AS1Q495Z4 193 aa3.94□□□□□ -1.78
ATXN3-236ENST00000556220 SMIM15Q7Z3B0 74 aa3.94□□□□□ -1.78
ATXN3-236ENST00000556220 MRPL52Q86TS9 123 aaKnown RBP3.94□□□□□ -1.78
ATXN3-236ENST00000556220 KRTAP7-1Q8IUC3 87 aa3.94□□□□□ -1.78
ATXN3-236ENST00000556220 PCP2Q8IVA1 136 aa3.94□□□□□ -1.78
ATXN3-236ENST00000556220 TMEM101Q96IK0 257 aa3.94□□□□□ -1.78
ATXN3-236ENST00000556220 ZNF22P17026 224 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-236ENST00000556220 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
ATXN3-236ENST00000556220 PAPPA-AS1Q5QFB9 102 aa3.93□□□□□ -1.78
ATXN3-236ENST00000556220 ERASQ7Z444 233 aa3.93□□□□□ -1.78
ATXN3-236ENST00000556220 FAM19A5Q7Z5A7 132 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-236ENST00000556220 SCGB3A1Q96QR1 104 aa3.93□□□□□ -1.78
ATXN3-236ENST00000556220 TIMM17AQ99595 171 aa3.93□□□□□ -1.78
ATXN3-236ENST00000556220 PPDPFQ9H3Y8 114 aa3.93□□□□□ -1.78
ATXN3-236ENST00000556220 CDC42SE2Q9NRR3 84 aa3.93□□□□□ -1.78
ATXN3-236ENST00000556220 PYGO1Q9Y3Y4 419 aa3.93□□□□□ -1.78
ATXN3-236ENST00000556220 USH2AO75445 5202 aa3.93□□□□□ -1.78
ATXN3-236ENST00000556220 IGLV5-45A0A087WSX0 123 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 TRAV12-1A0A0B4J245 112 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 COX7A2LO14548 114 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 CFC1BP0CG36 223 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 IGLC3P0DOY3 106 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 ORMDL2Q53FV1 153 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 LBHQ53QV2 105 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-236ENST00000556220 LINC00242Q5T6M2 205 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 FAM19A3Q7Z5A8 133 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 TIMM21Q9BVV7 248 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 CYSLTR1Q9Y271 337 aa3.92□□□□□ -1.78
ATXN3-236ENST00000556220 K7EMI3 77 aa3.91□□□□□ -1.78
ATXN3-236ENST00000556220 M0QXV9 152 aa3.91□□□□□ -1.78
ATXN3-236ENST00000556220 TLX1NBP0CAT3 122 aa3.91□□□□□ -1.78
ATXN3-236ENST00000556220 CTAG1AP78358 180 aa3.91□□□□□ -1.78
ATXN3-236ENST00000556220 MRPS36P82909 103 aaKnown RBP3.91□□□□□ -1.78
ATXN3-236ENST00000556220 KRTAP13-2Q52LG2 175 aa3.91□□□□□ -1.78
ATXN3-236ENST00000556220 LINC00337Q8N6G1 96 aa3.91□□□□□ -1.78
ATXN3-236ENST00000556220 LINC00304Q8N9R0 145 aa3.91□□□□□ -1.78
ATXN3-236ENST00000556220 PLEKHB2Q96CS7 222 aa3.91□□□□□ -1.78
ATXN3-236ENST00000556220 C14orf144Q96I85 54 aa3.91□□□□□ -1.78
ATXN3-236ENST00000556220 TMEM223A0PJW6 202 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 F8VRH5 84 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 F8WDY8 70 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 ATP5LO75964 103 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 PPP1R17O96001 155 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 SPAG11BQ08648 103 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 PMVKQ15126 192 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 SPATA45Q537H7 98 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 C5orf38Q86SI9 138 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 KIR2DL4Q99706 377 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 ANAPC11Q9NYG5 84 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 HSPB8Q9UJY1 196 aa3.9□□□□□ -1.79
ATXN3-236ENST00000556220 MT1HP80294 61 aa3.89□□□□□ -1.79
ATXN3-236ENST00000556220 TMEM141Q96I45 108 aa3.89□□□□□ -1.79
ATXN3-236ENST00000556220 LITAFQ99732 161 aa3.89□□□□□ -1.79
ATXN3-236ENST00000556220 MAP1LC3CQ9BXW4 147 aa3.89□□□□□ -1.79
ATXN3-236ENST00000556220 SPANXA1Q9NS26 97 aa3.89□□□□□ -1.79
ATXN3-236ENST00000556220 CHTOPQ9Y3Y2 248 aaKnown RBP3.89□□□□□ -1.79
ATXN3-236ENST00000556220 CSDC2Q9Y534 153 aaKnown RBP3.89□□□□□ -1.79
ATXN3-236ENST00000556220 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
ATXN3-236ENST00000556220 IGHV3OR16-9A0A0B4J2B5 98 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 207.9 ms