RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 IFITM1P13164 125 aa7.1□□□□□ -1.27
TMEM260-208ENST00000555905 DDTP30046 118 aa7.1□□□□□ -1.27
TMEM260-208ENST00000555905 NPC2P61916 151 aa7.1□□□□□ -1.27
TMEM260-208ENST00000555905 TAL2Q16559 108 aa7.1□□□□□ -1.27
TMEM260-208ENST00000555905 LINC01620Q4KN68 170 aa7.1□□□□□ -1.27
TMEM260-208ENST00000555905 C16orf90A8MZG2 172 aa7.09□□□□□ -1.27
TMEM260-208ENST00000555905 PTTG1IPP53801 180 aa7.09□□□□□ -1.27
TMEM260-208ENST00000555905 HSD52Q0P140 79 aa7.09□□□□□ -1.27
TMEM260-208ENST00000555905 SDIM1Q6ZPB5 146 aa7.09□□□□□ -1.27
TMEM260-208ENST00000555905 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
TMEM260-208ENST00000555905 KRTAP4-8Q9BYQ9 185 aa7.09□□□□□ -1.27
TMEM260-208ENST00000555905 XAGE1AQ9HD64 81 aa7.09□□□□□ -1.27
TMEM260-208ENST00000555905 LINC00474Q9P2X8 69 aa7.09□□□□□ -1.27
TMEM260-208ENST00000555905 A0A096LNI7 61 aa7.08□□□□□ -1.28
TMEM260-208ENST00000555905 IGKV2-24A0A0C4DH68 120 aa7.08□□□□□ -1.28
TMEM260-208ENST00000555905 CTAG1AP78358 180 aa7.08□□□□□ -1.28
TMEM260-208ENST00000555905 MUSTN1Q8IVN3 82 aa7.08□□□□□ -1.28
TMEM260-208ENST00000555905 LOC107984156A0A0G2JMH3 177 aa7.07□□□□□ -1.28
TMEM260-208ENST00000555905 A0A1B0GVY2 172 aa7.07□□□□□ -1.28
TMEM260-208ENST00000555905 PCP4L1A6NKN8 68 aa7.07□□□□□ -1.28
TMEM260-208ENST00000555905 RPL24P83731 157 aaKnown RBP7.07□□□□□ -1.28
TMEM260-208ENST00000555905 ARL17AQ8IVW1 177 aa7.07□□□□□ -1.28
TMEM260-208ENST00000555905 CEND1Q8N111 149 aa7.07□□□□□ -1.28
TMEM260-208ENST00000555905 PPDPFQ9H3Y8 114 aa7.07□□□□□ -1.28
TMEM260-208ENST00000555905 HECTD4Q9Y4D8 3996 aa7.07□□□□□ -1.28
TMEM260-208ENST00000555905 C9orf129Q5T035 196 aaKnown RBP7.06□□□□□ -1.28
TMEM260-208ENST00000555905 SOSTDC1Q6X4U4 206 aa7.06□□□□□ -1.28
TMEM260-208ENST00000555905 DPH3Q96FX2 82 aa7.06□□□□□ -1.28
TMEM260-208ENST00000555905 PKD1P98161 4303 aa7.06□□□□□ -1.28
TMEM260-208ENST00000555905 RYR3Q15413 4870 aa7.06□□□□□ -1.28
TMEM260-208ENST00000555905 DNAH11Q96DT5 4516 aa7.05□□□□□ -1.28
TMEM260-208ENST00000555905 M0R143 59 aa7.05□□□□□ -1.28
TMEM260-208ENST00000555905 CHTF8P0CG12 524 aa7.04□□□□□ -1.28
TMEM260-208ENST00000555905 A4D1N5 150 aa7.03□□□□□ -1.28
TMEM260-208ENST00000555905 NDUFC2O95298 119 aa7.03□□□□□ -1.28
TMEM260-208ENST00000555905 HINT1P49773 126 aaPredicted RBP7.03□□□□□ -1.28
TMEM260-208ENST00000555905 SPACA4Q8TDM5 124 aa7.03□□□□□ -1.28
TMEM260-208ENST00000555905 PLA2G2DQ9UNK4 145 aa7.03□□□□□ -1.28
TMEM260-208ENST00000555905 FAM168BA1KXE4 195 aa7.02□□□□□ -1.29
TMEM260-208ENST00000555905 FXYD2P54710 66 aa7.02□□□□□ -1.29
TMEM260-208ENST00000555905 KRTAP10-1P60331 282 aa7.02□□□□□ -1.29
TMEM260-208ENST00000555905 BVES-AS1Q5T3Y7 98 aa7.02□□□□□ -1.29
TMEM260-208ENST00000555905 FAM19A5Q7Z5A7 132 aaPredicted RBP7.02□□□□□ -1.29
TMEM260-208ENST00000555905 NKAPP1Q8N9T2 125 aa7.02□□□□□ -1.29
TMEM260-208ENST00000555905 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.02□□□□□ -1.29
TMEM260-208ENST00000555905 NCR3O14931 201 aa7.01□□□□□ -1.29
TMEM260-208ENST00000555905 VPREB1P12018 145 aa7.01□□□□□ -1.29
TMEM260-208ENST00000555905 SERTAD4-AS1Q5TG53 156 aa7.01□□□□□ -1.29
TMEM260-208ENST00000555905 IGLV5-37A0A075B6J1 123 aa7□□□□□ -1.29
TMEM260-208ENST00000555905 A0A1W2PNN7 141 aa7□□□□□ -1.29
TMEM260-208ENST00000555905 PANO1I0J062 215 aa7□□□□□ -1.29
TMEM260-208ENST00000555905 PRR3P79522 188 aaKnown RBP7□□□□□ -1.29
TMEM260-208ENST00000555905 BATFQ16520 125 aa7□□□□□ -1.29
TMEM260-208ENST00000555905 Q8NDZ9 215 aa7□□□□□ -1.29
TMEM260-208ENST00000555905 TRBV10-2A0A0K0K1G8 114 aa6.99□□□□□ -1.29
TMEM260-208ENST00000555905 A6NDN8 102 aa6.99□□□□□ -1.29
TMEM260-208ENST00000555905 M0R378 163 aa6.99□□□□□ -1.29
TMEM260-208ENST00000555905 RAB37Q96AX2 223 aa6.99□□□□□ -1.29
TMEM260-208ENST00000555905 NHP2Q9NX24 153 aaKnown RBP6.99□□□□□ -1.29
TMEM260-208ENST00000555905 C22orf24Q9Y442 160 aa6.99□□□□□ -1.29
TMEM260-208ENST00000555905 DNAH5Q8TE73 4624 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 IGKV2-28A0A075B6P5 120 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 A0A087WYN8 130 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 TRAV13-2A0A0B4J235 113 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 A0A0B4J2C4 111 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 M0QXV9 152 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 IGKV2D-28P01615 120 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 CFC1BP0CG36 223 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 CFC1P0CG37 223 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 LBHQ53QV2 105 aaPredicted RBP6.98□□□□□ -1.29
TMEM260-208ENST00000555905 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 Q6ZSA8 131 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 OR13C6PQ8NH95 151 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 FAM30AQ9NZY2 134 aa6.98□□□□□ -1.29
TMEM260-208ENST00000555905 MRPL55Q7Z7F7 128 aaKnown RBP6.97□□□□□ -1.29
TMEM260-208ENST00000555905 KRTAP7-1Q8IUC3 87 aa6.97□□□□□ -1.29
TMEM260-208ENST00000555905 PLAC8Q9NZF1 115 aa6.97□□□□□ -1.29
TMEM260-208ENST00000555905 A0A1B0GWB2 263 aa6.96□□□□□ -1.3
TMEM260-208ENST00000555905 GAGE10A6NGK3 116 aa6.96□□□□□ -1.3
TMEM260-208ENST00000555905 LINC00337Q8N6G1 96 aa6.96□□□□□ -1.3
TMEM260-208ENST00000555905 C7orf33Q8WU49 177 aa6.96□□□□□ -1.3
TMEM260-208ENST00000555905 PKHD1P08F94 4074 aa6.96□□□□□ -1.3
TMEM260-208ENST00000555905 EPM2AB3EWF7 344 aa6.95□□□□□ -1.3
TMEM260-208ENST00000555905 H3BS24 57 aa6.95□□□□□ -1.3
TMEM260-208ENST00000555905 K7ERJ3 54 aa6.95□□□□□ -1.3
TMEM260-208ENST00000555905 KRTAP9-2Q9BYQ4 174 aa6.95□□□□□ -1.3
TMEM260-208ENST00000555905 TMEM126AQ9H061 195 aa6.95□□□□□ -1.3
TMEM260-208ENST00000555905 PRO1854Q9UHT4 67 aa6.95□□□□□ -1.3
TMEM260-208ENST00000555905 CBY1Q9Y3M2 126 aa6.95□□□□□ -1.3
TMEM260-208ENST00000555905 TRBV10-3A0A0K0K1G6 114 aa6.94□□□□□ -1.3
TMEM260-208ENST00000555905 IGLV6-57P01721 117 aa6.94□□□□□ -1.3
TMEM260-208ENST00000555905 RPL13AP40429 203 aaKnown RBP6.94□□□□□ -1.3
TMEM260-208ENST00000555905 SCXQ7RTU7 201 aa6.94□□□□□ -1.3
TMEM260-208ENST00000555905 PHF5AQ7RTV0 110 aaKnown RBP6.94□□□□□ -1.3
TMEM260-208ENST00000555905 CIRBP-AS1Q8TBR5 109 aa6.94□□□□□ -1.3
TMEM260-208ENST00000555905 LINC00167Q96N53 147 aa6.94□□□□□ -1.3
TMEM260-208ENST00000555905 SNHG12Q9BXW3 62 aa6.94□□□□□ -1.3
TMEM260-208ENST00000555905 RPL37AP8A6NKH3 93 aa6.93□□□□□ -1.3
TMEM260-208ENST00000555905 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.93□□□□□ -1.3
TMEM260-208ENST00000555905 H7C2G1 150 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms